Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Neomonachus_20schauinslandi_20[genbank_20GCA_5F002201575.1_202017-
06-20] 7,872 sequences; 2,400,917,536 total letters
Query= NC_026141.2
Length=4988
Score E
Sequences producing significant alignments: (Bits) Value
seq7761 107 6e-20
seq7767 104 7e-19
seq1668 100 9e-18
seq7872 98.7 3e-17
seq7846 98.7 3e-17
seq7837 98.7 3e-17
seq7828 98.7 3e-17
>seq7761
Length=5337317
Score = 107 bits (118), Expect = 6e-20
Identities = 67/72 (93%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|||||| |||||||||||||||||| |||||||||||||||||||||||||||||| | |
Sbjct 477633 GCTGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 477574
Query 2829 CCGGGCTTCAGC 2840
||||| ||||||
Sbjct 477573 CCGGGTTTCAGC 477562
>seq7767
Length=50048226
Score = 104 bits (114), Expect = 7e-19
Identities = 66/72 (92%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|| ||| |||||||||||||||||| |||||||||||||||||||||||||||||||| |
Sbjct 39681841 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCAATC 39681782
Query 2829 CCGGGCTTCAGC 2840
||||| ||| ||
Sbjct 39681781 CCGGGTTTCGGC 39681770
Score = 98.7 bits (108), Expect = 3e-17
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|| ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | |
Sbjct 39675343 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 39675284
Query 2829 CCGGGCTTCAGC 2840
||||| ||| ||
Sbjct 39675283 CCGGGTTTCGGC 39675272
>seq1668
Length=1138
Score = 100 bits (110), Expect = 9e-18
Identities = 66/73 (90%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 2768 GGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAAC 2827
||| ||| |||||||||||||||||| ||||||||||||||||| |||||||||||| ||
Sbjct 895 GGCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAGGGTCCCTGGTTCGAC 836
Query 2828 CCCGGGCTTCAGC 2840
|||||| ||| ||
Sbjct 835 CCCGGGTTTCGGC 823
Score = 84.2 bits (92), Expect = 7e-13
Identities = 52/56 (93%), Gaps = 0/56 (0%)
Strand=Plus/Plus
Query 2768 GGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTT 2823
||| ||| |||||||||||||||||| |||||||||||||||||||||||| ||||
Sbjct 351 GGCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCGGGTT 406
>seq7872
Length=10206820
Score = 98.7 bits (108), Expect = 3e-17
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|| ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | |
Sbjct 9377917 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 9377976
Query 2829 CCGGGCTTCAGC 2840
||||| ||| ||
Sbjct 9377977 CCGGGTTTCGGC 9377988
>seq7846
Length=12828309
Score = 98.7 bits (108), Expect = 3e-17
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|| ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | |
Sbjct 9173583 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 9173524
Query 2829 CCGGGCTTCAGC 2840
||||| ||| ||
Sbjct 9173523 CCGGGTTTCGGC 9173512
>seq7837
Length=29518589
Score = 98.7 bits (108), Expect = 3e-17
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|| ||| |||||||| ||||||||| |||||||||||||||||||||||||||||| |||
Sbjct 28938594 GCCGAAATAGCTCAGCTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGACC 28938535
Query 2829 CCGGGCTTCAGC 2840
||||| ||| ||
Sbjct 28938534 CCGGGTTTCGGC 28938523
Score = 98.7 bits (108), Expect = 3e-17
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|| ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | |
Sbjct 28975320 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 28975261
Query 2829 CCGGGCTTCAGC 2840
||||| ||| ||
Sbjct 28975260 CCGGGTTTCGGC 28975249
Score = 93.3 bits (102), Expect = 1e-15
Identities = 60/66 (91%), Gaps = 0/66 (0%)
Strand=Plus/Plus
Query 2768 GGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAAC 2827
||| || |||||||||||||||||| |||||||||||||||||||||||||||||| |
Sbjct 27937445 GGCCGAGATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGAT 27937504
Query 2828 CCCGGG 2833
||||||
Sbjct 27937505 CCCGGG 27937510
>seq7828
Length=21597463
Score = 98.7 bits (108), Expect = 3e-17
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|| ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | |
Sbjct 15707400 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 15707459
Query 2829 CCGGGCTTCAGC 2840
||||| ||| ||
Sbjct 15707460 CCGGGTTTCGGC 15707471
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 15848235349440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |