Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neomonachus_20schauinslandi_20[genbank_20GCA_5F002201575.1_202017- 06-20] 7,872 sequences; 2,400,917,536 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq7816 259 6e-64 seq7771 172 6e-38 seq7759 159 4e-34 seq7763 120 4e-22 seq7727 95.1 1e-14 seq7785 84.2 3e-11 >seq7816 Length=41823926 Score = 259 bits (286), Expect = 6e-64 Identities = 247/316 (78%), Gaps = 0/316 (0%) Strand=Plus/Minus Query 171076 TGACCCAGGATGAGAGGGTGCTGCTGAACACGCCAGCCTCCCTGAAATGCTCCCTGCAGA 171135 ||||||| |||| | || ||||||||| || || ||| | | |||||| ||||| | Sbjct 30774546 TGACCCAAAATGAAAAAAAGCCGCTGAACACACCTGCTTCCTTAAGATGCTCTCTGCAAA 30774487 Query 171136 CTTCTCAGGAGGTGCTGATTGTCACCTGGCAGAAAATCAAGCCCACCATTCCAGAGAACA 171195 ||| |||| || ||||||| || ||||||||||||||| | | ||||| |||| Sbjct 30774486 ATTCCGAGGAAGTCTTGATTGTGACATGGCAGAAAATCAAGGCTGTTAGCCCAGAAAACA 30774427 Query 171196 TGATAACTTTTAGCAAAGACCACGGGGTGGTGGTCCAGCCGGCTTATAAGGACAAGATAA 171255 || | || || ||||| |||| ||||| ||||||||||| || ||||| |||||||||| Sbjct 30774426 TGGTCACCTTCAGCAAGAACCATGGGGTTGTGGTCCAGCCTGCCTATAAAGACAAGATAA 30774367 Query 171256 ACATCACCCAGCTTGGACTCCAAAACTCAACCATCACTTTTTGGAATACCACCTTAGAGG 171315 ||||||||||||| | |||| | ||||||||||| || || ||||| |||||| | |||| Sbjct 30774366 ACATCACCCAGCTGGAACTCAAGAACTCAACCATTACCTTCTGGAACACCACCCTGGAGG 30774307 Query 171316 ACGAGGGGTGCTACAACTGCCTCTTTAACACCTTTGGGTCTGGGAAAATCTCGGGGGTGG 171375 | || ||||| ||||| |||||||| || || ||||| |||||||| ||||| || Sbjct 30774306 ATGAAGGGTGTTACAAGTGCCTCTTCAATACTTTTGGTTCTGGGAAGATCTCAGGAACAA 30774247 Query 171376 CCTGCCTCACCCTCTC 171391 ||||||||| |||||| Sbjct 30774246 CCTGCCTCAGCCTCTC 30774231 Score = 210 bits (232), Expect = 3e-49 Identities = 209/271 (77%), Gaps = 0/271 (0%) Strand=Plus/Minus Query 171388 TCTCNGTGCAGCCCACTGTGTTTCTGCATTATAAATTTTTTGATGACCACCTGAACATCA 171447 || | || |||||||| ||||| || || |||||||| || || |||||||| || |||| Sbjct 30771916 TCCCAGTACAGCCCACAGTGTTCCTTCACTATAAATTCTTCGAAGACCACCTAAATATCA 30771857 Query 171448 CCTGTTCTGCCAATGCCCGCCCGCCACCTCAGATTTTTTGGAAGATTTCGGGGTCAGAAA 171507 | || ||||||||||||||||| | ||| ||| | |||||| | || ||||||| | Sbjct 30771856 CTTGCTCTGCCAATGCCCGCCCAGCCCCTGTGATCTCCTGGAAGGTATCTGGGTCAGGGA 30771797 Query 171508 TTGAAAACAGTAGCGAGGTTCTTTCCCATTCTAATGGAACTACTTCTGTAACCAGTGTAC 171567 |||||||||||| |||||||| | || | ||||| || || ||||| || || || | Sbjct 30771796 TTGAAAACAGTACTGAGGTTCTCTTTCACCCCAATGGGACCACGTCTGTCACGAGCGTTC 30771737 Query 171568 TCCAAGTTAAAGACCCCAAGAGTCAGTTGGGAAAGGAGGTTATCTGCCAAGTGTGGCACC 171627 |||| | |||||||||||| |||| |||| |||||||| ||||||| ||| ||||| Sbjct 30771736 TCCAGATCAAAGACCCCAAGCGTCAAGTGGGGAAGGAGGTGGTCTGCCAGGTGCTGCACC 30771677 Query 171628 TGGGAAATGTAACTAACTTAAGGGAAACTGT 171658 |||| ||||| || | | | | | ||||||| Sbjct 30771676 TGGGGAATGTGACCAGCGTCATGCAAACTGT 30771646 >seq7771 Length=57971676 Score = 172 bits (190), Expect = 6e-38 Identities = 137/165 (83%), Gaps = 0/165 (0%) Strand=Plus/Plus Query 146982 CTTAAGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAA 147041 ||| ||||| || | ||| || | ||||||||||||||| | ||||||||| |||||||| Sbjct 7629508 CTTCAGGCCTGTGATGTGTGCGATCATGTAGGTGAGCAGGGCGTAGCTGGCGATGTTGAA 7629567 Query 147042 GGGGACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTCCCCGTC 147101 ||| || ||||||||||||||||| ||||||||||||||||| || || ||||| |||| Sbjct 7629568 GGGCACACCCAGGCCCATGTCCCCTGACCTCTGGTACAGCTGACAGGACAGCTCGCCGTT 7629627 Query 147102 GGCCACGTAAAACTGGCACAGGATGTGGCACGGCGGCAGCGCCAT 147146 ||||||| |||||||| ||| |||||||| || || ||||| Sbjct 7629628 CACCACGTAGAACTGGCAGAGGGCATGGCACGGAGGGAGGGCCAT 7629672 >seq7759 Length=36627259 Score = 159 bits (176), Expect = 4e-34 Identities = 134/167 (80%), Gaps = 12/167 (7%) Strand=Plus/Minus Query 178231 AGGGTTACTTGGGTTGCCAGGCCTTGTCAGAGATGATTCAGTTTTACTTGGAGGAGGTGA 178290 |||||||| |||||||||| |||||||| |||||||| ||||| ||| |||||||||||| Sbjct 5668620 AGGGTTACCTGGGTTGCCAAGCCTTGTCGGAGATGATCCAGTTCTACCTGGAGGAGGTGA 5668561 Query 178291 TGCCTCAGGCCGAGAATCACAGCGGGGGTGGAGGCCCGGACATTAAGGAGCATGTAAACT 178350 |||| ||||| ||||| ||| | ||| |||| ||||| ||||| |||| Sbjct 5668560 TGCCCCAGGCTGAGAACCAC------------GACCCAAACATCAAGGAACATGTGAACT 5668513 Query 178351 CTCTGGGGGAAAAGCTAAAGACCCTTAGAGTGAGGCTGCGGCGATGT 178397 | |||||||||||||| |||||||| || ||||||||||||| ||| Sbjct 5668512 CCCTGGGGGAAAAGCTGAAGACCCTCAGGCTGAGGCTGCGGCGTTGT 5668466 Score = 89.7 bits (98), Expect = 6e-13 Identities = 72/87 (83%), Gaps = 0/87 (0%) Strand=Plus/Minus Query 178462 AGCTTCAAGAAAAGGGTGTTTACAAAGCTATGAGTGAGTTTGATATTTTTATTAACTACA 178521 |||| ||||| | ||||| |||||||| |||||||||||||| || || || ||||||| Sbjct 5666301 AGCTCCAAGAGAGAGGTGTCTACAAAGCCATGAGTGAGTTTGACATCTTCATCAACTACA 5666242 Query 178522 TAGAAGCTTACATGACAACAAAAATGA 178548 ||||| | |||||||||| || |||| Sbjct 5666241 TAGAAACCTACATGACAATGAAGATGA 5666215 Score = 84.2 bits (92), Expect = 3e-11 Identities = 55/61 (90%), Gaps = 0/61 (0%) Strand=Plus/Minus Query 178173 CAAATGAAGGACCAGCTGGACAACATGTTGTTAAATGGGTCCCTGCTGGAAGACTTTAAG 178232 |||||||||||| ||||||||||||||||||| | |||||| ||||||| ||||||||| Sbjct 5668946 CAAATGAAGGACAAGCTGGACAACATGTTGTTGACTGGGTCGTTGCTGGAGGACTTTAAG 5668887 Query 178233 G 178233 | Sbjct 5668886 G 5668886 >seq7763 Length=5490626 Score = 120 bits (132), Expect = 4e-22 Identities = 527/826 (64%), Gaps = 45/826 (5%) Strand=Plus/Minus Query 8610 GTACTCTCTGGTGTTTTTGTTTGGGCTAATTGGCAATGCCCTGGTGATCCTAGTCCTCAT 8669 ||| || ||||||||| || |||| || | ||||||| ||||| | | ||||||| Sbjct 173332 GTATTCCCTGGTGTTTGTGGTTGGTCTGCTGGGCAATGTGGTGGTGGTGGTGATCCTCAT 173273 Query 8670 AAAGTACAAGAGGCTCAGGATCATGACCAACATCTTCCTGTTCAACCTGGCCCTTGGTGA 8729 || |||||||||||| |||| |||||||||||||||||| |||| ||||| || ||| Sbjct 173272 GAAATACAAGAGGCTCTGGATTATGACCAACATCTTCCTGCTCAATTTGGCCATTTCTGA 173213 Query 8730 CCTGCTGCTGATTTTCACCCTCCCCTTTTGGATTCACTTCCACTCGGGGGGAACTGGTGG 8789 | |||| | | |||||||| || ||||||||| | || | | ||| || Sbjct 173212 CTTGCTCTTTCTATTCACCCTGGTGTTCTGGATTCAC-TATGCT-GAGTCGAA----TGA 173159 Query 8790 GTGGGACGCCGACCACCACATGTGTAAGTTTATAGTGGGCCTTTGCAACGTGGCACTGTA 8849 |||| | || |||||||||| || | || |||| |||||| | || Sbjct 173158 ATGGGTTTTTGGCCCTTCCATGTGTAAGCTTCTCTCTGGGCTTTATTACGTGGGCTTATA 173099 Query 8850 CAGCGAAGTCCTGTTTATCATCCTGTTGACTCTGGACAGGTATCTTGCAGTTGTGTACGC 8909 ||| || || | || ||||||||| |||| | ||| |||| || || | || | || Sbjct 173098 CAGTGAGATCTTTTTCATCATCCTGCTGACCATAGACCGGTACCTGGCCATCGTCCATGC 173039 Query 8910 GGTGGCTTACAGGCTGGTCCGCGTGGTACCAATAGGCATCCTCGCCAGCCTCCTGGCCTG 8969 ||| | | | | ||| || | | || || || | || | || |||| Sbjct 173038 TGTGTTTGCCCTTCGAGCCCGGACTGTCACTTTTGGTGTCATCACGAGTGTTCTCACCTG 172979 Query 8970 GATTCTGGCTGTGTTGGGAACCATGCCAGAGTTTATCTTTTATGAATCCAATAATGCCAC 9029 | |||| | | | | | || | || || |||||||| |||||||| | || | Sbjct 172978 GGGCATGGCAGGGCTAGCAGCCCTCCCTGAATTTATCTTCCATGAATCCCAAAA----AG 172923 Query 9030 AGGC----AAGGGGGTCTGCCAAGCCTCCTACAC------------AGACTTTTGGAAGG 9073 |||| || |||||| | | ||| | |||| |||||| Sbjct 172922 AGGCCCAACAGTTTGTCTGCTCACCTATTTACCCAGAAGACCAAGAAGACAGATGGAAGC 172863 Query 9074 GGGTTGATGTTACCAGCATGACCATGGTCACCCTCATCCTGCCTTTGCTTATCATGGCCT 9133 | | ||| | || |||| || | ||||| ||||||||||| ||||||| Sbjct 172862 GTTTCCATGCTCTGAGAATGAATATCCTGGGTCTCATTCTGCCTTTGCTCATCATGGTTG 172803 Query 9134 TCTGCTACTGGAAAATCATCAAGGTCCTCCTCA-AGGCCCACAACAGGTCGAGAAACCTG 9192 | ||||||| ||| || || || || | | |||| ||| || ||| Sbjct 172802 TTTGCTACTCTGGAATTATTAAAACGCTGCTGAGATGCCC----CAGTAAGAAAAAGTAC 172747 Query 9193 CACGCCGTCAAGCTCATTTTGATCATGGTGGTGCTTTATTTTGTCTTTTGGATCCCCTAC 9252 | ||| || ||||||||| |||| ||||| | | ||| | || |||| |||||| Sbjct 172746 AAGGCCATCCGGCTCATTTTTGTCATCATGGTGGTCTTTTTCATTTTCTGGACACCCTAC 172687 Query 9253 AAC---GTCCTGCTCATTTTACACACCTACCAAGAGGCCATTTTTG-GGCCAGACTGTGA 9308 ||| ||||| ||| | | | | ||| | | | |||| | |||| ||||| Sbjct 172686 AACCTGGTCCTCCTCCTCT---CGGCTTTTCAAACGATCTTCTTTGAGACCAG-TTGTGA 172631 Query 9309 AGCGCGGCGCA---GGGTGGACATGGCCCTCTTGGTGGCTGAGATGATCGCCTGCACCCA 9365 || | ||| | ||||| ||||| | |||| | ||| ||||||||| ||| || Sbjct 172630 ---GCAGAGCAAACAGCTGGACGTGGCCATGCAGGTGACGGAGGTGATCGCCTACACGCA 172574 Query 9366 CTGCTGCGTCAACCCCGTCATCTACGCGTTTGTGGGCGAAAAGTTC 9411 |||||||||||||||| ||||||| || || || || || | |||| Sbjct 172573 CTGCTGCGTCAACCCCATCATCTATGCCTTCGTTGGGGAGAGGTTC 172528 Score = 118 bits (130), Expect = 1e-21 Identities = 121/158 (77%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 8610 GTACTCTCTGGTGTTTTTGTTTGGGCTAATTGGCAATGCCCTGGTGATCCTAGTCCTCAT 8669 |||||| |||||||| | ||| || | ||||| ||||||| |||| |||||||| Sbjct 215587 GTACTCCCTGGTGTTCATCACTGGCCTGGTGGGCAACATCCTGGTGCTCCTGGTCCTCAT 215646 Query 8670 AAAGTACAAGAGGCTCAGGATCATGACCAACATCTTCCTGTTCAACCTGGCCCTTGGTGA 8729 ||||||||||||||| || |||||||| ||||| ||| |||| |||||| || || Sbjct 215647 GCAGTACAAGAGGCTCAAGAGCATGACCAGCATCTACCTCCTCAATCTGGCCATTTCAGA 215706 Query 8730 CCTGCTGCTGATTTTCACCCTCCCCTTTTGGATTCACT 8767 |||||| | | ||||| || ||||| |||||| ||| Sbjct 215707 CCTGCTCTTCCTCTTCACGCTGCCCTTCTGGATTGACT 215744 >seq7727 Length=9722677 Score = 95.1 bits (104), Expect = 1e-14 Identities = 111/150 (74%), Gaps = 0/150 (0%) Strand=Plus/Plus Query 8611 TACTCTCTGGTGTTTTTGTTTGGGCTAATTGGCAATGCCCTGGTGATCCTAGTCCTCATA 8670 ||||| ||||| ||| ||||||| || |||| ||| | ||||||| | ||||| | Sbjct 7446873 TACTCCCTGGTCTTTCTGTTTGGTCTCCTTGGAAATTCTGTGGTGATTGTGGTCCTGTTC 7446932 Query 8671 AAGTACAAGAGGCTCAGGATCATGACCAACATCTTCCTGTTCAACCTGGCCCTTGGTGAC 8730 |||||||||||||||| | ||||||| || | | |||| ||||||| ||| | ||| Sbjct 7446933 AAGTACAAGAGGCTCAAGTCCATGACCGACGTGTACCTGCTCAACCTTGCCATCTCGGAC 7446992 Query 8731 CTGCTGCTGATTTTCACCCTCCCCTTTTGG 8760 ||||| | | || ||||||| || ||| Sbjct 7446993 CTGCTCTTCGTGCTCTCCCTCCCTTTCTGG 7447022 >seq7785 Length=4775541 Score = 84.2 bits (92), Expect = 3e-11 Identities = 118/165 (72%), Gaps = 7/165 (4%) Strand=Plus/Plus Query 146980 GGCTTAAGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTA----GCTGGCTAT 147035 ||||| ||||| || | ||| | || ||||||||||||| | || ||||| | Sbjct 3441777 GGCTTCAGGCCTGTGATGTGTGAGACTGTGTAGGTGAGCAGGGCCTACACAGCTGG---T 3441833 Query 147036 GTTGAAGGGGACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTC 147095 | ||||||| || |||||||||||| | |||||| ||| | | |||||| || ||||| Sbjct 3441834 GATGAAGGGCACACCCAGGCCCATGGCTTGCGACCTGTGGCAAACCTGGCAGGACAGCTC 3441893 Query 147096 CCCGTCGGCCACGTAAAACTGGCACAGGATGTGGCACGGCGGCAG 147140 || | || | || ||| |||||||| |||| || ||||| Sbjct 3441894 ACCATTCACCGCATAGAACCGGCACAGGGCGTGGTGTGGAGGCAG 3441938 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583430584780800