Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Neomonachus_20schauinslandi_20[genbank_20GCA_5F002201575.1_202017-
06-20] 7,872 sequences; 2,400,917,536 total letters
Query= NC_026421.1
Length=182380
Score E
Sequences producing significant alignments: (Bits) Value
seq7816 259 6e-64
seq7771 172 6e-38
seq7759 159 4e-34
seq7763 120 4e-22
seq7727 95.1 1e-14
seq7785 84.2 3e-11
>seq7816
Length=41823926
Score = 259 bits (286), Expect = 6e-64
Identities = 247/316 (78%), Gaps = 0/316 (0%)
Strand=Plus/Minus
Query 171076 TGACCCAGGATGAGAGGGTGCTGCTGAACACGCCAGCCTCCCTGAAATGCTCCCTGCAGA 171135
||||||| |||| | || ||||||||| || || ||| | | |||||| ||||| |
Sbjct 30774546 TGACCCAAAATGAAAAAAAGCCGCTGAACACACCTGCTTCCTTAAGATGCTCTCTGCAAA 30774487
Query 171136 CTTCTCAGGAGGTGCTGATTGTCACCTGGCAGAAAATCAAGCCCACCATTCCAGAGAACA 171195
||| |||| || ||||||| || ||||||||||||||| | | ||||| ||||
Sbjct 30774486 ATTCCGAGGAAGTCTTGATTGTGACATGGCAGAAAATCAAGGCTGTTAGCCCAGAAAACA 30774427
Query 171196 TGATAACTTTTAGCAAAGACCACGGGGTGGTGGTCCAGCCGGCTTATAAGGACAAGATAA 171255
|| | || || ||||| |||| ||||| ||||||||||| || ||||| ||||||||||
Sbjct 30774426 TGGTCACCTTCAGCAAGAACCATGGGGTTGTGGTCCAGCCTGCCTATAAAGACAAGATAA 30774367
Query 171256 ACATCACCCAGCTTGGACTCCAAAACTCAACCATCACTTTTTGGAATACCACCTTAGAGG 171315
||||||||||||| | |||| | ||||||||||| || || ||||| |||||| | ||||
Sbjct 30774366 ACATCACCCAGCTGGAACTCAAGAACTCAACCATTACCTTCTGGAACACCACCCTGGAGG 30774307
Query 171316 ACGAGGGGTGCTACAACTGCCTCTTTAACACCTTTGGGTCTGGGAAAATCTCGGGGGTGG 171375
| || ||||| ||||| |||||||| || || ||||| |||||||| ||||| ||
Sbjct 30774306 ATGAAGGGTGTTACAAGTGCCTCTTCAATACTTTTGGTTCTGGGAAGATCTCAGGAACAA 30774247
Query 171376 CCTGCCTCACCCTCTC 171391
||||||||| ||||||
Sbjct 30774246 CCTGCCTCAGCCTCTC 30774231
Score = 210 bits (232), Expect = 3e-49
Identities = 209/271 (77%), Gaps = 0/271 (0%)
Strand=Plus/Minus
Query 171388 TCTCNGTGCAGCCCACTGTGTTTCTGCATTATAAATTTTTTGATGACCACCTGAACATCA 171447
|| | || |||||||| ||||| || || |||||||| || || |||||||| || ||||
Sbjct 30771916 TCCCAGTACAGCCCACAGTGTTCCTTCACTATAAATTCTTCGAAGACCACCTAAATATCA 30771857
Query 171448 CCTGTTCTGCCAATGCCCGCCCGCCACCTCAGATTTTTTGGAAGATTTCGGGGTCAGAAA 171507
| || ||||||||||||||||| | ||| ||| | |||||| | || ||||||| |
Sbjct 30771856 CTTGCTCTGCCAATGCCCGCCCAGCCCCTGTGATCTCCTGGAAGGTATCTGGGTCAGGGA 30771797
Query 171508 TTGAAAACAGTAGCGAGGTTCTTTCCCATTCTAATGGAACTACTTCTGTAACCAGTGTAC 171567
|||||||||||| |||||||| | || | ||||| || || ||||| || || || |
Sbjct 30771796 TTGAAAACAGTACTGAGGTTCTCTTTCACCCCAATGGGACCACGTCTGTCACGAGCGTTC 30771737
Query 171568 TCCAAGTTAAAGACCCCAAGAGTCAGTTGGGAAAGGAGGTTATCTGCCAAGTGTGGCACC 171627
|||| | |||||||||||| |||| |||| |||||||| ||||||| ||| |||||
Sbjct 30771736 TCCAGATCAAAGACCCCAAGCGTCAAGTGGGGAAGGAGGTGGTCTGCCAGGTGCTGCACC 30771677
Query 171628 TGGGAAATGTAACTAACTTAAGGGAAACTGT 171658
|||| ||||| || | | | | | |||||||
Sbjct 30771676 TGGGGAATGTGACCAGCGTCATGCAAACTGT 30771646
>seq7771
Length=57971676
Score = 172 bits (190), Expect = 6e-38
Identities = 137/165 (83%), Gaps = 0/165 (0%)
Strand=Plus/Plus
Query 146982 CTTAAGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAA 147041
||| ||||| || | ||| || | ||||||||||||||| | ||||||||| ||||||||
Sbjct 7629508 CTTCAGGCCTGTGATGTGTGCGATCATGTAGGTGAGCAGGGCGTAGCTGGCGATGTTGAA 7629567
Query 147042 GGGGACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTCCCCGTC 147101
||| || ||||||||||||||||| ||||||||||||||||| || || ||||| ||||
Sbjct 7629568 GGGCACACCCAGGCCCATGTCCCCTGACCTCTGGTACAGCTGACAGGACAGCTCGCCGTT 7629627
Query 147102 GGCCACGTAAAACTGGCACAGGATGTGGCACGGCGGCAGCGCCAT 147146
||||||| |||||||| ||| |||||||| || || |||||
Sbjct 7629628 CACCACGTAGAACTGGCAGAGGGCATGGCACGGAGGGAGGGCCAT 7629672
>seq7759
Length=36627259
Score = 159 bits (176), Expect = 4e-34
Identities = 134/167 (80%), Gaps = 12/167 (7%)
Strand=Plus/Minus
Query 178231 AGGGTTACTTGGGTTGCCAGGCCTTGTCAGAGATGATTCAGTTTTACTTGGAGGAGGTGA 178290
|||||||| |||||||||| |||||||| |||||||| ||||| ||| ||||||||||||
Sbjct 5668620 AGGGTTACCTGGGTTGCCAAGCCTTGTCGGAGATGATCCAGTTCTACCTGGAGGAGGTGA 5668561
Query 178291 TGCCTCAGGCCGAGAATCACAGCGGGGGTGGAGGCCCGGACATTAAGGAGCATGTAAACT 178350
|||| ||||| ||||| ||| | ||| |||| ||||| ||||| ||||
Sbjct 5668560 TGCCCCAGGCTGAGAACCAC------------GACCCAAACATCAAGGAACATGTGAACT 5668513
Query 178351 CTCTGGGGGAAAAGCTAAAGACCCTTAGAGTGAGGCTGCGGCGATGT 178397
| |||||||||||||| |||||||| || ||||||||||||| |||
Sbjct 5668512 CCCTGGGGGAAAAGCTGAAGACCCTCAGGCTGAGGCTGCGGCGTTGT 5668466
Score = 89.7 bits (98), Expect = 6e-13
Identities = 72/87 (83%), Gaps = 0/87 (0%)
Strand=Plus/Minus
Query 178462 AGCTTCAAGAAAAGGGTGTTTACAAAGCTATGAGTGAGTTTGATATTTTTATTAACTACA 178521
|||| ||||| | ||||| |||||||| |||||||||||||| || || || |||||||
Sbjct 5666301 AGCTCCAAGAGAGAGGTGTCTACAAAGCCATGAGTGAGTTTGACATCTTCATCAACTACA 5666242
Query 178522 TAGAAGCTTACATGACAACAAAAATGA 178548
||||| | |||||||||| || ||||
Sbjct 5666241 TAGAAACCTACATGACAATGAAGATGA 5666215
Score = 84.2 bits (92), Expect = 3e-11
Identities = 55/61 (90%), Gaps = 0/61 (0%)
Strand=Plus/Minus
Query 178173 CAAATGAAGGACCAGCTGGACAACATGTTGTTAAATGGGTCCCTGCTGGAAGACTTTAAG 178232
|||||||||||| ||||||||||||||||||| | |||||| ||||||| |||||||||
Sbjct 5668946 CAAATGAAGGACAAGCTGGACAACATGTTGTTGACTGGGTCGTTGCTGGAGGACTTTAAG 5668887
Query 178233 G 178233
|
Sbjct 5668886 G 5668886
>seq7763
Length=5490626
Score = 120 bits (132), Expect = 4e-22
Identities = 527/826 (64%), Gaps = 45/826 (5%)
Strand=Plus/Minus
Query 8610 GTACTCTCTGGTGTTTTTGTTTGGGCTAATTGGCAATGCCCTGGTGATCCTAGTCCTCAT 8669
||| || ||||||||| || |||| || | ||||||| ||||| | | |||||||
Sbjct 173332 GTATTCCCTGGTGTTTGTGGTTGGTCTGCTGGGCAATGTGGTGGTGGTGGTGATCCTCAT 173273
Query 8670 AAAGTACAAGAGGCTCAGGATCATGACCAACATCTTCCTGTTCAACCTGGCCCTTGGTGA 8729
|| |||||||||||| |||| |||||||||||||||||| |||| ||||| || |||
Sbjct 173272 GAAATACAAGAGGCTCTGGATTATGACCAACATCTTCCTGCTCAATTTGGCCATTTCTGA 173213
Query 8730 CCTGCTGCTGATTTTCACCCTCCCCTTTTGGATTCACTTCCACTCGGGGGGAACTGGTGG 8789
| |||| | | |||||||| || ||||||||| | || | | ||| ||
Sbjct 173212 CTTGCTCTTTCTATTCACCCTGGTGTTCTGGATTCAC-TATGCT-GAGTCGAA----TGA 173159
Query 8790 GTGGGACGCCGACCACCACATGTGTAAGTTTATAGTGGGCCTTTGCAACGTGGCACTGTA 8849
|||| | || |||||||||| || | || |||| |||||| | ||
Sbjct 173158 ATGGGTTTTTGGCCCTTCCATGTGTAAGCTTCTCTCTGGGCTTTATTACGTGGGCTTATA 173099
Query 8850 CAGCGAAGTCCTGTTTATCATCCTGTTGACTCTGGACAGGTATCTTGCAGTTGTGTACGC 8909
||| || || | || ||||||||| |||| | ||| |||| || || | || | ||
Sbjct 173098 CAGTGAGATCTTTTTCATCATCCTGCTGACCATAGACCGGTACCTGGCCATCGTCCATGC 173039
Query 8910 GGTGGCTTACAGGCTGGTCCGCGTGGTACCAATAGGCATCCTCGCCAGCCTCCTGGCCTG 8969
||| | | | | ||| || | | || || || | || | || ||||
Sbjct 173038 TGTGTTTGCCCTTCGAGCCCGGACTGTCACTTTTGGTGTCATCACGAGTGTTCTCACCTG 172979
Query 8970 GATTCTGGCTGTGTTGGGAACCATGCCAGAGTTTATCTTTTATGAATCCAATAATGCCAC 9029
| |||| | | | | | || | || || |||||||| |||||||| | || |
Sbjct 172978 GGGCATGGCAGGGCTAGCAGCCCTCCCTGAATTTATCTTCCATGAATCCCAAAA----AG 172923
Query 9030 AGGC----AAGGGGGTCTGCCAAGCCTCCTACAC------------AGACTTTTGGAAGG 9073
|||| || |||||| | | ||| | |||| ||||||
Sbjct 172922 AGGCCCAACAGTTTGTCTGCTCACCTATTTACCCAGAAGACCAAGAAGACAGATGGAAGC 172863
Query 9074 GGGTTGATGTTACCAGCATGACCATGGTCACCCTCATCCTGCCTTTGCTTATCATGGCCT 9133
| | ||| | || |||| || | ||||| ||||||||||| |||||||
Sbjct 172862 GTTTCCATGCTCTGAGAATGAATATCCTGGGTCTCATTCTGCCTTTGCTCATCATGGTTG 172803
Query 9134 TCTGCTACTGGAAAATCATCAAGGTCCTCCTCA-AGGCCCACAACAGGTCGAGAAACCTG 9192
| ||||||| ||| || || || || | | |||| ||| || |||
Sbjct 172802 TTTGCTACTCTGGAATTATTAAAACGCTGCTGAGATGCCC----CAGTAAGAAAAAGTAC 172747
Query 9193 CACGCCGTCAAGCTCATTTTGATCATGGTGGTGCTTTATTTTGTCTTTTGGATCCCCTAC 9252
| ||| || ||||||||| |||| ||||| | | ||| | || |||| ||||||
Sbjct 172746 AAGGCCATCCGGCTCATTTTTGTCATCATGGTGGTCTTTTTCATTTTCTGGACACCCTAC 172687
Query 9253 AAC---GTCCTGCTCATTTTACACACCTACCAAGAGGCCATTTTTG-GGCCAGACTGTGA 9308
||| ||||| ||| | | | | ||| | | | |||| | |||| |||||
Sbjct 172686 AACCTGGTCCTCCTCCTCT---CGGCTTTTCAAACGATCTTCTTTGAGACCAG-TTGTGA 172631
Query 9309 AGCGCGGCGCA---GGGTGGACATGGCCCTCTTGGTGGCTGAGATGATCGCCTGCACCCA 9365
|| | ||| | ||||| ||||| | |||| | ||| ||||||||| ||| ||
Sbjct 172630 ---GCAGAGCAAACAGCTGGACGTGGCCATGCAGGTGACGGAGGTGATCGCCTACACGCA 172574
Query 9366 CTGCTGCGTCAACCCCGTCATCTACGCGTTTGTGGGCGAAAAGTTC 9411
|||||||||||||||| ||||||| || || || || || | ||||
Sbjct 172573 CTGCTGCGTCAACCCCATCATCTATGCCTTCGTTGGGGAGAGGTTC 172528
Score = 118 bits (130), Expect = 1e-21
Identities = 121/158 (77%), Gaps = 0/158 (0%)
Strand=Plus/Plus
Query 8610 GTACTCTCTGGTGTTTTTGTTTGGGCTAATTGGCAATGCCCTGGTGATCCTAGTCCTCAT 8669
|||||| |||||||| | ||| || | ||||| ||||||| |||| ||||||||
Sbjct 215587 GTACTCCCTGGTGTTCATCACTGGCCTGGTGGGCAACATCCTGGTGCTCCTGGTCCTCAT 215646
Query 8670 AAAGTACAAGAGGCTCAGGATCATGACCAACATCTTCCTGTTCAACCTGGCCCTTGGTGA 8729
||||||||||||||| || |||||||| ||||| ||| |||| |||||| || ||
Sbjct 215647 GCAGTACAAGAGGCTCAAGAGCATGACCAGCATCTACCTCCTCAATCTGGCCATTTCAGA 215706
Query 8730 CCTGCTGCTGATTTTCACCCTCCCCTTTTGGATTCACT 8767
|||||| | | ||||| || ||||| |||||| |||
Sbjct 215707 CCTGCTCTTCCTCTTCACGCTGCCCTTCTGGATTGACT 215744
>seq7727
Length=9722677
Score = 95.1 bits (104), Expect = 1e-14
Identities = 111/150 (74%), Gaps = 0/150 (0%)
Strand=Plus/Plus
Query 8611 TACTCTCTGGTGTTTTTGTTTGGGCTAATTGGCAATGCCCTGGTGATCCTAGTCCTCATA 8670
||||| ||||| ||| ||||||| || |||| ||| | ||||||| | ||||| |
Sbjct 7446873 TACTCCCTGGTCTTTCTGTTTGGTCTCCTTGGAAATTCTGTGGTGATTGTGGTCCTGTTC 7446932
Query 8671 AAGTACAAGAGGCTCAGGATCATGACCAACATCTTCCTGTTCAACCTGGCCCTTGGTGAC 8730
|||||||||||||||| | ||||||| || | | |||| ||||||| ||| | |||
Sbjct 7446933 AAGTACAAGAGGCTCAAGTCCATGACCGACGTGTACCTGCTCAACCTTGCCATCTCGGAC 7446992
Query 8731 CTGCTGCTGATTTTCACCCTCCCCTTTTGG 8760
||||| | | || ||||||| || |||
Sbjct 7446993 CTGCTCTTCGTGCTCTCCCTCCCTTTCTGG 7447022
>seq7785
Length=4775541
Score = 84.2 bits (92), Expect = 3e-11
Identities = 118/165 (72%), Gaps = 7/165 (4%)
Strand=Plus/Plus
Query 146980 GGCTTAAGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTA----GCTGGCTAT 147035
||||| ||||| || | ||| | || ||||||||||||| | || ||||| |
Sbjct 3441777 GGCTTCAGGCCTGTGATGTGTGAGACTGTGTAGGTGAGCAGGGCCTACACAGCTGG---T 3441833
Query 147036 GTTGAAGGGGACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTC 147095
| ||||||| || |||||||||||| | |||||| ||| | | |||||| || |||||
Sbjct 3441834 GATGAAGGGCACACCCAGGCCCATGGCTTGCGACCTGTGGCAAACCTGGCAGGACAGCTC 3441893
Query 147096 CCCGTCGGCCACGTAAAACTGGCACAGGATGTGGCACGGCGGCAG 147140
|| | || | || ||| |||||||| |||| || |||||
Sbjct 3441894 ACCATTCACCGCATAGAACCGGCACAGGGCGTGGTGTGGAGGCAG 3441938
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583430584780800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |