Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neomonachus_20schauinslandi_20[genbank_20GCA_5F002201575.1_202017- 06-20] 7,872 sequences; 2,400,917,536 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq7837 179 5e-39 seq5056 167 3e-35 seq7785 152 7e-31 seq7767 129 8e-24 seq1152 118 2e-20 seq5 102 1e-15 seq7823 91.5 2e-12 >seq7837 Length=29518589 Score = 179 bits (198), Expect = 5e-39 Identities = 178/229 (78%), Gaps = 6/229 (3%) Strand=Plus/Minus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 ||||||||||| ||||||||||||||| || || |||| || |||| ||||| Sbjct 27548935 TACAAGGTGCTGAAGCAGGTGCACCCCGACAC-----GGGCATC-TCGTCCAAGGCCATG 27548882 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 |||||||||||||| ||||||||||| |||| ||||||| |||||| ||| Sbjct 27548881 GGCATCATGAACTCGTTCGTCAACGACATCTTCGAGCGCATCGCGGGCGAGGCGTCCCGC 27548822 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 ||||||| | |||||||||| || ||| |||| ||||||||||| ||||||||| Sbjct 27548821 CTGGCGCATTACAACAAGCGCTCGACCATCACGTCGCGGGAGATCCAGACGGCCGTGCGC 27548762 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 ||| | ||| ||| || ||||||| ||||||||| ||||||||||||| Sbjct 27548761 CTGCTGCTGCCCGGGGAGCTGGCCAAGCACGCCGTGTCCGAGGGCACCA 27548713 Score = 179 bits (198), Expect = 5e-39 Identities = 178/229 (78%), Gaps = 6/229 (3%) Strand=Plus/Plus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 ||||||||||| ||||||||||||||| || || |||| || |||| ||||| Sbjct 28024800 TACAAGGTGCTGAAGCAGGTGCACCCCGACAC-----GGGCATC-TCGTCCAAGGCCATG 28024853 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 |||||||||||||| ||||||||||| |||| ||||||| |||||| ||| Sbjct 28024854 GGCATCATGAACTCGTTCGTCAACGACATCTTCGAGCGCATCGCGGGCGAGGCGTCCCGC 28024913 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 ||||||| | |||||||||| || ||| |||| ||||||||||| ||||||||| Sbjct 28024914 CTGGCGCATTACAACAAGCGCTCGACCATCACGTCGCGGGAGATCCAGACGGCCGTGCGC 28024973 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 ||| | ||| ||| || ||||||| ||||||||| ||||||||||||| Sbjct 28024974 CTGCTGCTGCCCGGGGAGCTGGCCAAGCACGCCGTGTCCGAGGGCACCA 28025022 Score = 176 bits (194), Expect = 6e-38 Identities = 177/229 (77%), Gaps = 6/229 (3%) Strand=Plus/Minus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 |||||||| || ||||||||||||||| || || |||| || |||| ||||| Sbjct 27052692 TACAAGGTACTGAAGCAGGTGCACCCCGACAC-----GGGCATC-TCGTCCAAGGCCATG 27052639 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 |||||||||||||| ||||||||||| |||| ||||||| |||||| ||| Sbjct 27052638 GGCATCATGAACTCGTTCGTCAACGACATCTTCGAGCGCATCGCGGGCGAGGCGTCCCGC 27052579 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 ||||||| | |||||||||| || ||| |||| ||||||||||| ||||||||| Sbjct 27052578 CTGGCGCATTACAACAAGCGCTCGACCATCACGTCGCGGGAGATCCAGACGGCCGTGCGC 27052519 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 ||| | ||| ||| || ||||||| ||||||||| ||||||||||||| Sbjct 27052518 CTGCTGCTGCCCGGGGAGCTGGCCAAGCACGCCGTGTCCGAGGGCACCA 27052470 >seq5056 Length=4279 Score = 167 bits (184), Expect = 3e-35 Identities = 177/232 (76%), Gaps = 6/232 (3%) Strand=Plus/Plus Query 724911 ATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCC 724970 |||||||||||||| ||||||||||||||| |||| |||| || |||| || Sbjct 616 ATCTACAAGGTGCTGAAGCAGGTGCACCCCGACACCGG-----CATC-TCGTCCAAGGCC 669 Query 724971 ATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGT 725030 ||| |||||||| || ||||| | ||||| |||| ||||||| |||||| Sbjct 670 ATGAGCATCATGAATTCCTTTGTTACTGACATCTTCGAGCGCATCGCGGGCGAGGCGTCC 729 Query 725031 CGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTG 725090 |||||||||| | |||||||||| || ||| |||| ||||||||||| |||||| Sbjct 730 CGCCTGGCGCATTACAACAAGCGCTCGACCATCACGTCGCGGGAGATCCAGACGGCCGTG 789 Query 725091 CGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 |||||| | ||| ||| || ||||||| ||||||||| ||||||||||||| Sbjct 790 CGCCTGCTGCTGCCCGGGGAGCTGGCCAAGCACGCCGTGTCCGAGGGCACCA 841 Score = 145 bits (160), Expect = 1e-28 Identities = 172/232 (74%), Gaps = 6/232 (3%) Strand=Plus/Minus Query 724911 ATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCC 724970 |||||||||||| | ||||||||||||||| |||| |||| || |||| || Sbjct 3828 ATCTACAAGGTGTTGAAGCAGGTGCACCCCGACACCGG-----CATC-TCGTCCAAGGCC 3775 Query 724971 ATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGT 725030 ||| |||||||| || ||||| | ||||| |||| ||||| | |||||| Sbjct 3774 ATGAGCATCATGAATTCCTTTGTTACTGACATCTTCGAGCGCATTGCGGGCGAGGCGTCC 3715 Query 725031 CGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTG 725090 |||||| ||| | |||||||| || ||| |||| ||||||||||| |||||| Sbjct 3714 CGCCTGACGCATTACAACAAGCAGTCGACCATCACGTCGCGGGAGATCCAGACGGCCGTG 3655 Query 725091 CGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 |||||| | ||| ||| || ||||||| ||||||||| ||||||||||||| Sbjct 3654 CGCCTGCTGCTGCCCGGGGAGCTGGCCAAGCACGCCGTGTCCGAGGGCACCA 3603 >seq7785 Length=4775541 Score = 152 bits (168), Expect = 7e-31 Identities = 141/179 (79%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 724964 CAAGTCCATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGA 725023 |||| ||||| ||||||||||| || ||||||||||| |||| ||||||| | || Sbjct 3348422 CAAGGCCATGGGCATCATGAACTCCTTCGTCAACGACATCTTCGAGCGCATCGCCGGTGA 3348481 Query 725024 GGCCGGTCGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGAC 725083 |||| |||||||||| | |||||||||| || ||| | || ||||||||||| Sbjct 3348482 GGCCTCCCGCCTGGCGCATTACAACAAGCGCTCGACCATCACGTCCCGGGAGATCCAGAC 3348541 Query 725084 CGCCGTGCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 |||||||||||| | ||| |||||| ||||||| |||||| || ||||||||||||| Sbjct 3348542 GGCCGTGCGCCTGCTGCTGCCCGGCGAGCTGGCCAAGCACGCTGTGTCCGAGGGCACCA 3348600 >seq7767 Length=50048226 Score = 129 bits (142), Expect = 8e-24 Identities = 394/594 (66%), Gaps = 20/594 (3%) Strand=Plus/Plus Query 1455715 CGAGCCGCTGCTGCGCGATAACCCGAACCGCTTTGTCCTGTTCCCCATCCGCTACCAGCG 1455774 |||||| || ||| | || ||||| ||||||||| | ||||| || | ||||| Sbjct 16035845 CGAGCCACTACTGAGAGAAAACCCTCGTCGCTTTGTCATCTTCCCTGTCGGGTACCATGA 16035904 Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834 || ||| | ||||| | |||| | ||||| ||||||||||| || || ||||| || | Sbjct 16035905 TATTTGGCAGATGTATGAGAAAG-CTGAGGCTTCCTTTTGGACAGCTGAAGAGGTGGATC 16035963 Query 1455835 TCGGCGCCGACACGGTCCACTGGGTGTCGCTGAGCGACGACGAGCGCCA-TTTC-ATCAA 1455892 | | |||| ||| || || |||| || ||| | | |||| ||| Sbjct 16035964 TTTCCAAGGACATTCAGCACCAGGAATCCCTGAAGCCTGAGGAGAGATACTTTCTATCC- 16036022 Query 1455893 GCACGTCCTCGCCTTTTTT-CGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGGC 1455951 ||||| || || || ||| ||||| || |||||||| || || ||| ||| | Sbjct 16036023 -CACGTTCTGGCTTTCTTTGCGCCG--AGTGATGGCATAGTAAATGAAAACTTGGTGGAG 16036079 Query 1455952 CGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGCC 1456011 || |||| |||| || || | |||| || || | || || || |||| || ||| Sbjct 16036080 CGGTTTAGCCAAGAAGTTCAGATTACAGAAGCCCGCTGTTTCTATGGCTTCCGAATTGCC 16036139 Query 1456012 ATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGACCCG 1456071 || ||||||||||| ||||| | ||| ||||| || ||||| || || || || | Sbjct 16036140 ATGGAAAACATCCATTCTGAGATGTACAGTCTCCTCATTGACACTTATGTTAAAGATTCC 16036199 Query 1456072 GTCGAGAAGGACCACCTCTTTCGCGCCATCGACACGGTGCCGTCGGTGAGGAAAAAGGCC 1456131 || | ||| ||||| |||| |||| || |||| | || | ||| ||||| Sbjct 16036200 AAAGAAAGGGAATTTCTCTTCAACGCCCTCGAGACAATGCCTTGTGTAAAGAAGAAGGCA 16036259 Query 1456132 GACTGGGCGATGAAGTGGA---TCAACAAGGAGGGCCTCGACACTTTGCCGAGCGGCTCG 1456188 |||||||| || | |||| |||| |||| | || || | || ||| | | Sbjct 16036260 GACTGGGCCTTGCATTGGACTGGGGACAAAGAGG----CTAC-CTACGGGGAACGGGTTG 16036314 Query 1456189 TCGGCTTTGCCGC-GTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCG-CCATCTTTTGG 1456246 | | |||||| || || || || ||||| || || || ||| |||| | || || ||| Sbjct 16036315 TGGACTTTGCTGCTGTGGAAGGAATCTTCTTTTCTGGTTCTTT-TGCGACGATATTCTGG 16036373 Query 1456247 CTCAAGAAGCGCGGCCTCATGCCCGGTCTTCTGCTTTAGCAACGAATTTATCAG 1456300 |||||||| || | ||| ||||| || | || ||| ||| ||| |||| || Sbjct 16036374 CTCAAGAAACGTGACCTGATGCCTGGCCCCATG-TTTTCCAATGAACTTATTAG 16036426 >seq1152 Length=1953 Score = 118 bits (130), Expect = 2e-20 Identities = 125/165 (76%), Gaps = 0/165 (0%) Strand=Plus/Plus Query 724978 TCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGCCTGG 725037 ||||| | ||||| ||||| ||||| |||| |||||| || ||||||| || ||||| Sbjct 469 TCATGGATTCGTTCGTCAAGGACATCTTCGAGCGCATCACCAGCGAGGCCTCTCACCTGG 528 Query 725038 CGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGCCTGA 725097 ||| ||| ||||||| ||| ||| | | | ||||||||||| |||||||||||| Sbjct 529 TCCGCACCACCAAGCGCTCCACCATCACCTCCAGGGAGATCCAGACAGCCGTGCGCCTGT 588 Query 725098 TCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 | ||| ||| || | | || ||||||||| || |||| ||||| Sbjct 589 TGCTGCCCGGGGAGATCGGCAAGCACGCCGTGTCTGAGGCCACCA 633 >seq5 Length=5387717 Score = 102 bits (112), Expect = 1e-15 Identities = 116/156 (74%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 724986 TCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGCCTGGCGCGCTCC 725045 ||||| || || ||||| |||| |||||| | ||| ||| ||||||||| |||||| Sbjct 743 TCGTTCGTTAAGGACATCTTCGAGTGCATCGCCCACGAAGCCTCTCGCCTGGCCCGCTCC 684 Query 725046 AACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGCCTGATCATGCGC 725105 | ||||||| ||| ||| | | ||||||||||| ||||||| |||| | ||| Sbjct 683 ACCAAGCGCTCCACCATCACCTTCAGGGAGATCCAGACAGCCGTGCTCCTGCTGCTGCCG 624 Query 725106 GGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACC 725141 || || ||| || |||| |||| ||||| |||||| Sbjct 623 GGGGAGATGGGCAAGCACACCGTGTCCGAAGGCACC 588 >seq7823 Length=12955506 Score = 91.5 bits (100), Expect = 2e-12 Identities = 125/175 (71%), Gaps = 0/175 (0%) Strand=Plus/Plus Query 1818069 ATGGTAAAGGGCGTCACGCGCTCGGGAAAGGTGAGCGTCTTGACGATCTCATAGGGCACG 1818128 ||| | |||||||| ||| ||| | |||||| | | | |||| ||||||| Sbjct 10582656 ATGTTGAAGGGCGTGACGATCTCCGCAAAGGTCATGTTGGCGGCGATGGAGCGGGGCACG 10582715 Query 1818129 CCCACCTCGTCAATGTCAATCTCGGGGTCGGGGCTGATGACGGCGCGCGCGGTAAAGTTG 1818188 || |||| ||| ||| | | |||||||||| ||||||||| ||| || | |||| Sbjct 10582716 CCGACCTGGTCGATGGAGAGGTTGGGGTCGGGGGTGATGACGGTGCGGGCCGAGAAGTCC 10582775 Query 1818189 ACGCGCTTGCCCATGCAATTGCCGCGGATCCTGCCCTCCTTGCCCTTGAACCGCT 1818243 || ||||||||||| || || |||| || ||| ||||||||||| | ||||| Sbjct 10582776 ACCCGCTTGCCCATCAGGTTCCCTCGGACCCGGCCTTCCTTGCCCTTCAGCCGCT 10582830 Score = 87.8 bits (96), Expect = 3e-11 Identities = 93/120 (78%), Gaps = 2/120 (2%) Strand=Plus/Plus Query 1816167 CGGCGGTCTTGACGGCCGTGTCGACCAGGCCCTCGCGGCCGCCGATCATGTGCAAAAACA 1816226 |||| |||||||| |||||||||| ||||||||||| || || || ||| || || | Sbjct 10578893 CGGCAGTCTTGACAGCCGTGTCGATGAGGCCCTCGCGACCCCCCATGGCGTGGAAGAAGA 10578952 Query 1816227 TCTCGCGCGAGT-TGAGGCCGCGCTCGTACGAGTTGCGCACAAAGCCGCGGCTCTCGGGC 1816285 |||| | | || |||||||| | ||| ||||| ||||||||| |||||||||||| Sbjct 10578953 ACTCG-GTGGGTGTGAGGCCGGCCAGGTAGGAGTTCTCCACAAAGCCTCGGCTCTCGGGC 10579011 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177051931131264