Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neomonachus_20schauinslandi_20[genbank_20GCA_5F002201575.1_202017- 06-20] 7,872 sequences; 2,400,917,536 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq7767 107 2e-18 seq7828 98.7 9e-16 seq7823 98.7 9e-16 seq7764 91.5 1e-13 seq9 91.5 1e-13 seq7858 89.7 5e-13 seq7857 87.8 2e-12 seq7782 82.4 7e-11 >seq7767 Length=50048226 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | ||| |||| | ||| | ||| |||||||||||||||||| || | | Sbjct 33066730 CCACCACGAAGTCTCCACACAAGATGAAGAGTAGACTCCTTTTGAATGTTGTAGTCAGAC 33066789 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 || || || | || ||||| ||||| || ||||| |||| | |||||| || | |||| Sbjct 33066790 AAAGTGCGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTCTGCTGATCAGGAGGA 33066849 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | | ||||| ||| ||||| ||| | | || | | || || | || ||| Sbjct 33066850 ATTCCTTCCTTATCCTGAATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGATCAACC 33066909 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || | ||||| || || ||||| | |||||||| || |||||||| Sbjct 33066910 TCGAGGGTGATGGTCTTCCCCGTAAGGGTTTTCACGAAAATCTGCAT 33066956 >seq7828 Length=21597463 Score = 98.7 bits (108), Expect = 9e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 ||| |||| | |||||||| | ||| | || |||||||||||||||||| || | | Sbjct 14213360 CCATCACGAAGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGAC 14213419 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 || | || | || ||||| ||||| || ||||| |||| | |||||| || | |||| Sbjct 14213420 AAAGGACGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTCTGCTGATCAGGAGGA 14213479 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | | ||||| | | ||||| ||| | | || | | || || | ||| ||| Sbjct 14213480 ATTCCTTCCTTATTCTGAATCTTGGCCTTTATATTTTCTATTGTATCCGAGGGTTCAACC 14213539 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || | ||||| || || ||||| | |||||||| || |||||||| Sbjct 14213540 TCGAGAGTGATGGTCTTCCCCGTAAGGGTTTTCACGAAAATCTGCAT 14213586 >seq7823 Length=12955506 Score = 98.7 bits (108), Expect = 9e-16 Identities = 137/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 ||| || || ||||||||||| | | || || | || ||||||||||| || ||||| Sbjct 3355517 CTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAA 3355458 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | || ||||||||| | || | || ||| || || |||||| ||||| | Sbjct 3355457 AATGAGCCTCTGCTGGTCAGGGGGGATGCCCTCTTTATCTTGGATCTTGGCCTTCACGTT 3355398 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | | ||||| || | |||||||||| ||||| || || || |||| || ||||| Sbjct 3355397 TTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCAC 3355338 Query 35725 AAATATCTGCAT 35736 || |||||||| Sbjct 3355337 GAAGATCTGCAT 3355326 Score = 89.7 bits (98), Expect = 5e-13 Identities = 142/206 (69%), Gaps = 10/206 (5%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 ||| || || ||||||||||| | | || || | || ||||||||||| || ||||| Sbjct 3355289 CTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAA 3355230 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | || ||||||||| | || | || ||| || || |||||| ||||| | | Sbjct 3355229 GATGAGCCTCTGCTGGTCAGGGGGGATGCCCTCTTTATCTTGGATCTTGGCCTTCACATT 3355170 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCC----------GTCA 35714 | | | ||||| || | |||||||||| ||||| || || || |||| Sbjct 3355169 TTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCNNNNNNNNNNAGTCA 3355110 Query 35715 AAGTTTTCACAAATATCTGCATTCTG 35740 | || ||||| || ||||||||| || Sbjct 3355109 AGGTCTTCACGAAGATCTGCATTTTG 3355084 >seq7764 Length=47977530 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/227 (69%), Gaps = 2/227 (1%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 ||||||| | |||||||| | ||| | || ||||||||||||| |||| || | Sbjct 26988199 CCACCACAAAGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGCTGTAGTCACAC 26988258 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 || ||| | ||| ||||| ||||| || | || |||| | ||||| || | |||| Sbjct 26988259 AAAGTTTGTCTGTCTTCCAGTTGCTTGCCAGTGAAGATCAGTC--TGCTGATCAGGAGGA 26988316 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | | ||||| ||| |||||| ||| | | || | || || | ||||| ||| Sbjct 26988317 ATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTACTGTACCTGAGGATTCAACC 26988376 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || | ||||| || || ||| | | ||||||||||| |||||||| Sbjct 26988377 TCGAGAGTGATGGTCTTCCCCATAAGGGTTTTCACAAAAATCTGCAT 26988423 >seq9 Length=2205763 Score = 91.5 bits (100), Expect = 1e-13 Identities = 164/235 (70%), Gaps = 5/235 (2%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 ||||| |||| | | |||||| || | || ||| || || || || || || | | Sbjct 1749325 CCACCCCGTAGGCGAAGCACCAAGTGCAGGGTGGACTCTTTCTGGATATTATAGTCTGAC 1749384 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | || || | || |||||||| || |||||||| | || ||||||||||| | || Sbjct 1749385 AGAGTACGGCCATCTTCCAGCTGTTTGCCCGCAAAAACCAGACGCTGCTGGTCAGGCGGG 1749444 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGC-TTCAGAGTTGCCACCGTGTCGCTCGATTC--C 35686 | || ||||||||| ||| ||| || || | | | | | ||||| || | || | Sbjct 1749445 ATGCCCTCCTTGTCTTGGAT-TTTGGCTTTGACATTCTCAATGGTGTCACTGGGCTCGAC 1749503 Query 35687 ACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT-TCTG 35740 ||||| | ||||| || || ||||||| || |||||||| |||||||| |||| Sbjct 1749504 ACCTCAAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACAAAGATCTGCATCTCTG 1749558 >seq7858 Length=29646629 Score = 89.7 bits (98), Expect = 5e-13 Identities = 137/194 (71%), Gaps = 1/194 (1%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 ||| || || ||||||||||| | | || || | || ||||||||||| | ||||| Sbjct 23743210 CTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCTGGCAAA 23743269 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCC-TTGTCCATGATCTTTTGCTTCAGAG 35663 || | || || |||||| | || | || |||| || ||| |||||| ||||| | Sbjct 23743270 GATGAGCCTCTCCTGGTCAGGGGGGATGCCCTCCTTTATCCTGGATCTTGGCCTTCACAT 23743329 Query 35664 TTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723 || | | ||||| || | |||||||||| ||||| || || | |||| || |||| Sbjct 23743330 TTTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCTGGTCAGGGTCTTCA 23743389 Query 35724 CAAATATCTGCATT 35737 || ||||||||| Sbjct 23743390 TGAAGATCTGCATT 23743403 Score = 84.2 bits (92), Expect = 2e-11 Identities = 154/226 (68%), Gaps = 0/226 (0%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | |||||||| | ||| | ||| |||||||||||||||||| || | | Sbjct 12424735 CCACCACGAAGTCTCAACACAAGATGAAGAGTAGACTCCTTTTGAATGTTGTAGTCAGAC 12424794 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 || || | | | ||||| ||||| || |||| |||| | |||||| || | |||| Sbjct 12424795 AAAGTGCATCCATTTTCCAGTTGCTTGCCAGCAACGATCAGTCTCTGCTGATCAGGAGGA 12424854 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | | ||||| ||| ||||| || | | || | | || || | ||| | Sbjct 12424855 ATTCCTTCCTTATCCTGAATCTTGGCCTGTACATTTTCTATTGTATCCGAGGGTTCAGGC 12424914 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCA 35735 || | ||||| || || ||||| | ||||||| || ||||||| Sbjct 12424915 TCGAGGGTGATGGTCTTCCCCGTGAGGGTTTTCAGGAAAATCTGCA 12424960 >seq7857 Length=43258702 Score = 87.8 bits (96), Expect = 2e-12 Identities = 137/196 (70%), Gaps = 0/196 (0%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 ||| || || ||||| ||||| | | || || | || ||||||||||| || ||||| Sbjct 31543708 CTCTTTCTGGATGTTATAATCAGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAA 31543767 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | || ||||||||| | || | || ||| || || |||||| ||||| | | Sbjct 31543768 AATGAGCCTCTGCTGGTCAGGGGGGATGCCCTCTTTATCTTGGATCTTGGCCTTCACATT 31543827 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | | |||| || | |||||||||| | ||| || || || || | || ||||| Sbjct 31543828 TTCGATGATGTCACTGGGCTCCACCTCCAGGGGGATGGTCTTGCCGGTTAGGGTCTTCAC 31543887 Query 35725 AAATATCTGCATTCTG 35740 || ||||||||| || Sbjct 31543888 GAAGATCTGCATTTTG 31543903 >seq7782 Length=35566003 Score = 82.4 bits (90), Expect = 7e-11 Identities = 117/161 (73%), Gaps = 3/161 (2%) Strand=Plus/Plus Query 35585 TCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCC 35644 |||||||| || |||||||| |||| ||||||||||| | || | | ||||||||| Sbjct 14262558 TCCAGCTGTTTGCCCGCAAAAATCAGACGCTGCTGGTCAGGCGGGATGTCCTCCTTGTCT 14262617 Query 35645 ATGATCTTTTGC-TTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGT 35703 ||| ||| || || | | | | | ||||| || | || ||||| | ||||| | Sbjct 14262618 TGGAT-TTTGGCTTTGACATTCTCAATGGTGTCACTGGGCTCAACCTCGAGGGTGATGTT 14262676 Query 35704 TTTACCCGTCAAAGTTTTCACAAATATCTGCATTCTGTGCG 35744 || ||||||| || |||||||| ||||||| ||| |||| Sbjct 14262677 CTTGCCCGTCAGGGTCTTCACAAAGATCTGCA-TCTCTGCG 14262716 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450749241909760