Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Neomonachus_20schauinslandi_20[genbank_20GCA_5F002201575.1_202017-
06-20] 7,872 sequences; 2,400,917,536 total letters
Query= NC_027213.1
Length=214699
Score E
Sequences producing significant alignments: (Bits) Value
seq7767 333 4e-86
seq7820 226 4e-54
seq7870 123 3e-23
seq7842 123 3e-23
seq7786 116 5e-21
>seq7767
Length=50048226
Score = 333 bits (368), Expect = 4e-86
Identities = 624/911 (68%), Gaps = 12/911 (1%)
Strand=Plus/Minus
Query 39267 TTCT-TTAAAAGTCAACATCTAAAGAAAAATGATTATCTTCT-TGTGACATAACTCCCAT 39324
|||| ||| |||||| |||| || | |||| ||| | || | |||||| ||||||||
Sbjct 16036806 TTCTCTTAGAAGTCAGCATCCAAGGTAAAAGAATTCTGTTGGATTTGACATCACTCCCAT 16036747
Query 39325 TTTTTGGTATTCACCAACGCGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATT 39384
| || || ||||| || | ||||| || || || | ||||||| ||| |||||
Sbjct 16036746 CCTCTGATACTCACCTACTCTCTTCTCAAAGAAGTT-----TCCCTTCCAGTGAAATATT 16036692
Query 39385 TTCCATGAAATCAAACGGATTAGTTGCATTATAtttttttttAAATCCTAATTCTGAAAT 39444
|||||||| ||||| ||||| | | | | || ||| |||| || ||
Sbjct 16036691 CTCCATGAAGTCAAATGGATTTTCTACTCTGAAAACCTTGCCAAAACCTAGCTCCAGCAT 16036632
Query 39445 CAATCTATCTGCAACAAATTCTATGTATGTTTTCATCATTTCACAATTCATTCCTATGAG 39504
| || | ||| ||||| || || | ||||| | |||||||| || |||||
Sbjct 16036631 AAGTCGGTGTGCCACAAACTCAATACACTGCTTCATTAACGTGCAATTCATCCCAATGAG 16036572
Query 39505 TTTAACTGGTAGAGCCTCCGTTAGAAACTCTTTTTCGATGTCTACGGCCTCTGTTATTAT 39564
|| | || | | |||||| || ||| | | || || ||||| | | |||||
Sbjct 16036571 CTTCAGGGGCAAGGTCTCCGTGAGGAACCCCTGCTCTATCCGAACGGCATTAATAATTAT 16036512
Query 39565 CGATGTTACTACCTCATCACTCGGTGGATGCAATAAATGTTTAAACATTAAGCAGGCGAA 39624
| ||| || | ||| || | | ||||| ||||| | |||||| ||
Sbjct 16036511 TTCCTTCACTCTCTGCTTGGAAGGTTTGTGGACCAGGTGTTTGAACATCAGGCAGGCAAA 16036452
Query 39625 GTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGCAT 39684
|||||| |||| ||||||||||| ||||| | ||| || ||||| || | ||||||||
Sbjct 16036451 GTCACAGTGTAAACCCTCATCTCTGCTAATAAGTTCATTGGAAAACATGGGGCCAGGCAT 16036392
Query 39685 TAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCTTC 39744
|| |||| || |||||||| ||||| | |||||||| |||||||||||||| |||||
Sbjct 16036391 CAGGTCACGTTTCTTGAGCCAGAATATCGTCGCAAAAGAACCAGAAAAGAAGATTCCTTC 16036332
Query 39745 TACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTGTATCATTATGTA---TCCACTT 39801
|| || ||||| | |||| | || ||||| | | || || | |||| |
Sbjct 16036331 CACAGCAGCAAAGTCCACAACCCGTTCCCCGTAGGTAGCCTCTTTGTCCCCAGTCCAATG 16036272
Query 39802 CTGTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGATA 39861
| ||||| || || ||||||||||||||||||||||| || | || || |||||| |
Sbjct 16036271 CAAGGCCCAGTCTGCCTTCTTCTTTACACAAGGCATTGTCTCGAGGGCGTTGAAGAGAAA 16036212
Query 39862 ATGTTTTTCATCACTATCTTTAACATATGTATCTATTAACAGACTATACATTTCTGAATG 39921
| |||| | |||||||||||| || || || | ||||| ||||| || |||||
Sbjct 16036211 TTCCCTTTCTTTGGAATCTTTAACATAAGTGTCAATGAGGAGACTGTACATCTCAGAATG 16036152
Query 39922 GATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATTTGTACCTC 39981
||||||||| || || || | || || || ||||| | ||||| ||||| || || ||
Sbjct 16036151 GATGTTTTCCATGGCAATTCGGAAGCCATAGAAACAGCGGGCTTCTGTAATCTGAACTTC 16036092
Query 39982 TGAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCACTAGCGGCAAAAAATGC 40041
| | ||| | ||| |||| |||||||| ||||| |||||||| | ||||| || ||
Sbjct 16036091 TTGGCTAAACCGCTCCACCAAGTTTTCATTTACTATGCCATCACTCGGCGCAAAGAAAGC 16036032
Query 40042 CAATACATGTTTAATAAAATATTTTTCATCGGGTGTCAATTTATTCC-AGTCATTGATAT 40100
|| || || | ||| ||| | || || || || | ||||| || | || |
Sbjct 16036031 CAGAACGTGGGATAGAAAGTATCTCTCCTCAGGCTTC-AGGGATTCCTGGTGCTGAATGT 16035973
Query 40101 CTTTTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCTGCCTTTTTGTACATGT 40160
| || || | ||| || ||||||||||||||||| || ||||| || || | ||||| |
Sbjct 16035972 CCTTGGAAAGATCCACCTCTTCAGCTGTCCAAAAGGAAGCCTCAGCTTTCTCATACATCT 16035913
Query 40161 TCCATATATCA 40171
||| ||||||
Sbjct 16035912 GCCAAATATCA 16035902
>seq7820
Length=31847680
Score = 226 bits (250), Expect = 4e-54
Identities = 620/942 (66%), Gaps = 17/942 (2%)
Strand=Plus/Minus
Query 39271 TTAAAAGTCAACATCTAAAGAAAAATGATTATCTTCTTG----TGACATAACTCCCATTT 39326
||| |||||| ||| | | |||| ||| | || ||| |||||| ||||| ||
Sbjct 14844002 TTATAAGTCAGTATCCACGGTAAAAGAATTCT-TTGTTGGACTTGACATCACTCCTATCC 14843944
Query 39327 TTTGGTATTCACCAACGCGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTTT 39386
| || || | || | | ||||| || || ||||| || ||||||| ||| ||||| |
Sbjct 14843943 TCTGATACTGGCCTCCTCTCTTCTCAAAGAAGTTAGTCTTCCCTTCCAGTGAAATATTCT 14843884
Query 39387 CCATGAAATCAAACGGATTAGTTGCATTATAtttttttttAAATCCTAATTCTGAAATCA 39446
|| | | ||||| ||||| | | | | || |||| |||| ||| | | |
Sbjct 14843883 CCCTAAGGTCAAATGGATTTTCTACTCTGGAAACCTTGCTAAAACCTAGTTCCTACCTAA 14843824
Query 39447 ATCTATCTGCAACAAATTCTATGTA-TGTTTTCATCATTTCACAATTCATTCCTATGAGT 39505
|| ||||| | ||||| || || || ||| | | | || ||||| || |||||
Sbjct 14843823 GTCAGTCTGCCATGAATTCAATATACTGCTTTACTAACGTG-CAGTTCATCCCAATGAGC 14843765
Query 39506 TTAACTGGTAGAGCCTCCGTTAGAAACTCTTTTTCGATGTCTACGGCCTCTGTTATTATC 39565
|| | || | ||||| | || ||||| | || || ||||| | | |||||
Sbjct 14843764 TTCGCGGGCAAGGCCTCTGGGAGGAACTCCTGGTCTATCCTAACGGCATTGATAATTATT 14843705
Query 39566 GATGTTACTACCTCATCACTCGGTGGATGCAATAAATGTTTAAACATTAAGCAGGCGAAG 39625
| ||| || || ||| ||| | | ||||| ||||| | |||||| |||
Sbjct 14843704 TCCTTCACTCTCTGCTCTGAAGGTTTATGGACCAGGTGTTTGAACATCAGGCAGGCAAAG 14843645
Query 39626 TCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAAT-GTGAGTCCAGGCAT 39684
| |||| ||||||||||| ||||| | || || ||||| | ||| ||||||||
Sbjct 14843644 TTGTGGTGTAAACCCTCATCTCTGCTAATAAGCTCATTGGAAAACCGCGAGGCCAGGCAT 14843585
Query 39685 TAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCTTC 39744
|| | | || |||||||| ||||| | ||| |||| ||| ||||| |||| |||||
Sbjct 14843584 CAGGCTGCATTTCTTGAGCCAGAATATCGACGCAGAAGAACCAAAAAAGGAGATTCCTTC 14843525
Query 39745 TACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTGTATCATTATGT---ATCCACTT 39801
|| ||||| | ||| | || ||||| | | || || | | |||
Sbjct 14843524 CGTGGCAGCAAAGTCCACATCCCATTCCCCGTAGGTAGCCTCTTTGTCCCCAACCCAACG 14843465
Query 39802 CTGTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGATA 39861
| ||||| || || |||||| || ||||||||||||| || || | || |||||| |
Sbjct 14843464 CAAGGCCCAGTCTGCCTTCTTCCTTCCACAAGGCATTGTCTCGATGGTGTTGAAGAGAAA 14843405
Query 39862 ATGTTTTTCATCACTATCTTTAACATATGTATCTATTAACAGACTATACATTTCTGAATG 39921
| | | || | |||||||| ||| || || | | |||||| |||| || |||||
Sbjct 14843404 TTCTGTCTCTTTGGAATCTTTAATATAAGTGTCAGTGAGGAGACTACACATCTCAGAATG 14843345
Query 39922 GATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATTTGTACCTC 39981
||||||||| || || || || || || || ||||| | ||||| || || | || ||
Sbjct 14843344 GATGTTTTCCATGGCAATTTGGAAGCCATAGAAACAGCAGGCTTCTGTCATCTCAACTTC 14843285
Query 39982 TGAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCACTAGCGGCAAAAAATGC 40041
| | | | | ||| |||| |||||||| ||||| ||| |||| || ||||| || ||
Sbjct 14843284 TTGGCCACACCGCTCCACCAAGTTTTCATTTACTATGCCAACACTCGCCGCAAAGAAAGC 14843225
Query 40042 C--AAT----ACATGTTTAATAAAATATTTTTCATCGGGTGTCAATTTATTCCAGTCATT 40095
| ||| || || ||||||| | | || || || ||| | ||||| |
Sbjct 14843224 CAGAATGTGAACGTGGGGTATAAAATCTCTCTCCTCAGGCTTCAGCGATTCCCAGTGTTG 14843165
Query 40096 GATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCTGCCTTTTTGTA 40155
|| || || || | || || ||||||||||||||||| || ||||| || || || |
Sbjct 14843164 AATGTCCTTGGAAAGATTCACCTCTTCAGCTGTCCAAAAGGAAGCCTCAGCTTTCTTACA 14843105
Query 40156 CATGTTCCATATATCACGATATTGTATTGGAAAAATAACAAA 40197
|| | ||| | |||| | || | || || || || |||||
Sbjct 14843104 TATCTGCCAAAGATCATGGTACTTCATAGGGAAGATGACAAA 14843063
>seq7870
Length=10551609
Score = 123 bits (136), Expect = 3e-23
Identities = 107/133 (80%), Gaps = 0/133 (0%)
Strand=Plus/Minus
Query 68719 TGAAATTCCCCAGATAACACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGAT 68778
|||||||| || || || ||||| ||||| || || || |||||||| ||||| | ||
Sbjct 10335165 TGAAATTCTCCTGACAAGACTCTGCGAGTATAGATGTTGCTGGTATAAGGTTCAATGGAC 10335106
Query 68779 TCATTATTTCCCAGAATTTGAGCAGTTGATGCAGTTGGCATAGGTGCCACCAATAAACTA 68838
||||||||||||||||| ||||||||||| ||||| ||||| || || | | ||||||
Sbjct 10335105 TCATTATTTCCCAGAATCTGAGCAGTTGAAGCAGTAGGCATCGGGGCAATAAGTAAACTG 10335046
Query 68839 TTTCTAAGACCAT 68851
||||| | |||||
Sbjct 10335045 TTTCTTATACCAT 10335033
Score = 120 bits (132), Expect = 4e-22
Identities = 129/171 (75%), Gaps = 0/171 (0%)
Strand=Plus/Minus
Query 68441 TCCATCCGTAGAAATGCATACTTGTTAGTTTGGAATAACTTGGATCGGCTATATGAATAT 68500
|||| ||||||||||||||||| || |||||| ||| | || || || || || || |
Sbjct 10337845 TCCAGCCGTAGAAATGCATACTGGTGAGTTTGCCATAGTTAGGCTCAGCAATGTGGATGT 10337786
Query 68501 TCATCGATTGACTTTGATCGATGAAAGCTCCTCTATCTGCCGCCATTTTTATAATACTCT 68560
||| ||||| |||||||| |||||||| ||||| || || ||||| || | || | |
Sbjct 10337785 TCAAAGATTGGCTTTGATCAATGAAAGCACCTCTTTCAGCTGCCATCTTAAGAACGGTTT 10337726
Query 68561 TTTGAGGAATTTCCCAAATAGTCTTAAAAATCTGTTTGATATCATCTGGAA 68611
| || | ||||||||| | ||||||| ||| || || | ||||| ||||
Sbjct 10337725 TCTGTGAAATTTCCCACACAGTCTTATAAAGTTGCTTCAGGTCATCAGGAA 10337675
Score = 111 bits (122), Expect = 2e-19
Identities = 127/171 (74%), Gaps = 0/171 (0%)
Strand=Plus/Minus
Query 70331 CATCACTAAATAGtttttttGTTTCCTTGTGTAAATTTGATATGGCTATTCTGGCTGCTA 70390
|| |||| || | ||| |||||||| ||||| || || || | ||| || || ||||| |
Sbjct 10311661 CACCACTGAACACTTTCTTTGTTTCTTTGTGCAAGTTGGAGACGGCAATCCTTGCTGCCA 10311602
Query 70391 GAATAGCATAGTCAGGATGTTGTGTAGTACAAGTAGCTGCTATTTCCGCAGCTAACGTAT 70450
| || |||||||||||||| | || || | || || ||| | || ||||| || ||||
Sbjct 10311601 GGATGGCATAGTCAGGATGCTTAGTCGTCAAGGTCGCAGCTGTCTCAGCAGCCAAAGTAT 10311542
Query 70451 CTAATTCTATAGTTGTAACTCCGTTATATAGCCCTTGAATAACTTTCATGG 70501
||| ||| | ||| || || || | |||| ||||| || ||||||||||
Sbjct 10311541 CTAGTTCCACAGTGGTGACCCCACTGTATAAGCCTTGGATTACTTTCATGG 10311491
Score = 93.3 bits (102), Expect = 6e-14
Identities = 101/134 (75%), Gaps = 0/134 (0%)
Strand=Plus/Minus
Query 69595 ACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAGAGATCTCTGGTTCTATTT 69654
||||||||||| || ||||| ||||||||||| || | || || || |||| | | |
Sbjct 10325155 ACTCGTTTCATGAAGAGATCTGGAATCCAAAGGGCAAAGAAAAGGTCCCTGGCACGCTGT 10325096
Query 69655 TCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCATAATATCAGAATGCCATGGT 69714
||||| |||||||| || || || | ||| |||||||| | ||| || ||||||| ||
Sbjct 10325095 TCTTCCTTTCCTGTGTTCTTCTTTAAATCCAGAAACTCAAAAATGTCTAAATGCCAAGGC 10325036
Query 69715 TCTAGATATATCGC 69728
|| || || || ||
Sbjct 10325035 TCCAGGTAAATAGC 10325022
Score = 87.8 bits (96), Expect = 2e-12
Identities = 106/142 (75%), Gaps = 2/142 (1%)
Strand=Plus/Minus
Query 69991 GTTCCCGCATTAAATAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTG 70050
|| || ||||| || | || ||||| || || || ||||| || |||||||| || |||
Sbjct 10316807 GTACCAGCATTGAAGAGAGTGGGAGAGGCATGGGTAAACCACTTCTCAGAAAGAAGGTTG 10316748
Query 70051 TATGTTTCAATAGCTGATTCTATATCCCACTGA-TGAATTCCTATCGCGACACGCATCAA 70109
|||||||||||||| | || ||||| ||| ||||| || | | || | ||||||
Sbjct 10316747 TATGTTTCAATAGCAGCATCAATATCTT-CTGCGTGAATCCCCACAGACACCCTCATCAA 10316689
Query 70110 CATATGCTGAGGTCGTTCTACC 70131
|||||| || |||| |||| ||
Sbjct 10316688 CATATGTTGTGGTCTTTCTGCC 10316667
Score = 86.0 bits (94), Expect = 9e-12
Identities = 62/72 (86%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 69507 ATATAGCCGTTCGAATTCATCTCCCCAAACATCATCCAATCCAGGACATTCATTTGGACA 69566
||||||| || ||||| ||||||||||| ||||||| ||||||||||||||||||||
Sbjct 10325829 ATATAGCTTCTCAAATTCCTCTCCCCAAACCTCATCCAGACCAGGACATTCATTTGGACA 10325770
Query 69567 CATCAATGACCA 69578
|| ||| |||||
Sbjct 10325769 CAACAAAGACCA 10325758
>seq7842
Length=42459490
Score = 123 bits (136), Expect = 3e-23
Identities = 103/126 (82%), Gaps = 0/126 (0%)
Strand=Plus/Minus
Query 39639 CCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGCATTAGACCACGCTTTT 39698
|||||||||| ||||| | ||| || ||||| ||||| |||||||| || || || || |
Sbjct 7548465 CCTCATCTCTGCTAATAAGTTCATTGGAAAACGTGAGGCCAGGCATCAGGCCGCGTTTCT 7548406
Query 39699 TGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCTTCTACTGCTGCAAATG 39758
||||||| ||||| | |||||||| |||||||||||||| ||||| || || ||||| |
Sbjct 7548405 TGAGCCAGAATATTGACGCAAAAGAACCAGAAAAGAAGATTCCTTCCACAGCAGCAAAAG 7548346
Query 39759 CAACAA 39764
| ||||
Sbjct 7548345 CCACAA 7548340
Score = 84.2 bits (92), Expect = 3e-11
Identities = 82/106 (77%), Gaps = 0/106 (0%)
Strand=Plus/Minus
Query 39877 ATCTTTAACATATGTATCTATTAACAGACTATACATTTCTGAATGGATGTTTTCAATCGC 39936
|||||||| ||| || || || | ||||| ||||| || |||||||||||||| || ||
Sbjct 7546436 ATCTTTAATATAAGTGTCAATGAGGAGACTGTACATCTCAGAATGGATGTTTTCCATGGC 7546377
Query 39937 CATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATTTGTACCTCT 39982
|| || || || || ||||| | ||||| ||||| || ||||||
Sbjct 7546376 AATTTGGAAGCCATAGAAACAGCGGGCTTCTGTAATCTGAACCTCT 7546331
>seq7786
Length=83011774
Score = 116 bits (128), Expect = 5e-21
Identities = 106/134 (79%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 39641 TCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGCATTAGACCACGCTTTTTG 39700
|||||||| || || | ||| || ||||| |||||||| ||||| ||||| | || ||
Sbjct 48121152 TCATCTCTGCTGATGAGTTCATTGGAAAACGTGAGTCCGGGCATGAGACCTCTTTTCTTT 48121211
Query 39701 AGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCTTCTACTGCTGCAAATGCA 39760
||||| ||||| |||||||||||||| || ||||| || |||||||| || ||||| ||
Sbjct 48121212 AGCCAGAATATAGCAGCAAAAGATCCCGAGAAGAAAATCCCTTCTACAGCAGCAAAAGCC 48121271
Query 39761 ACAAGTCTCTCTCC 39774
|| | ||| || ||
Sbjct 48121272 ACCACTCTTTCCCC 48121285
Score = 89.7 bits (98), Expect = 7e-13
Identities = 94/123 (76%), Gaps = 3/123 (2%)
Strand=Plus/Plus
Query 39987 AAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCACTAGCGGCAAAAAATGCCAATA 40046
|||||||| || |||||||||||||| ||||||||||| || |||||||| || ||||
Sbjct 48126727 AAAATCTTACC---AAATTTTCATTCACAATTCCATCACTGGCTGCAAAAAAGGCTAATA 48126783
Query 40047 CATGTTTAATAAAATATTTTTCATCGGGTGTCAATTTATTCCAGTCATTGATATCTTTTG 40106
|| |||||||| || ||||| | | | | || ||||||| | || ||| ||||
Sbjct 48126784 TGTGAGAGATAAAATACTTCTCATCCGATTTAAGCTTGTTCCAGTGAGGGAGATCCTTTG 48126843
Query 40107 ATA 40109
|||
Sbjct 48126844 ATA 48126846
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 686841208174080
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