Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neomonachus_20schauinslandi_20[genbank_20GCA_5F002201575.1_202017- 06-20] 7,872 sequences; 2,400,917,536 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq7767 333 4e-86 seq7820 226 4e-54 seq7870 123 3e-23 seq7842 123 3e-23 seq7786 116 5e-21 >seq7767 Length=50048226 Score = 333 bits (368), Expect = 4e-86 Identities = 624/911 (68%), Gaps = 12/911 (1%) Strand=Plus/Minus Query 39267 TTCT-TTAAAAGTCAACATCTAAAGAAAAATGATTATCTTCT-TGTGACATAACTCCCAT 39324 |||| ||| |||||| |||| || | |||| ||| | || | |||||| |||||||| Sbjct 16036806 TTCTCTTAGAAGTCAGCATCCAAGGTAAAAGAATTCTGTTGGATTTGACATCACTCCCAT 16036747 Query 39325 TTTTTGGTATTCACCAACGCGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATT 39384 | || || ||||| || | ||||| || || || | ||||||| ||| ||||| Sbjct 16036746 CCTCTGATACTCACCTACTCTCTTCTCAAAGAAGTT-----TCCCTTCCAGTGAAATATT 16036692 Query 39385 TTCCATGAAATCAAACGGATTAGTTGCATTATAtttttttttAAATCCTAATTCTGAAAT 39444 |||||||| ||||| ||||| | | | | || ||| |||| || || Sbjct 16036691 CTCCATGAAGTCAAATGGATTTTCTACTCTGAAAACCTTGCCAAAACCTAGCTCCAGCAT 16036632 Query 39445 CAATCTATCTGCAACAAATTCTATGTATGTTTTCATCATTTCACAATTCATTCCTATGAG 39504 | || | ||| ||||| || || | ||||| | |||||||| || ||||| Sbjct 16036631 AAGTCGGTGTGCCACAAACTCAATACACTGCTTCATTAACGTGCAATTCATCCCAATGAG 16036572 Query 39505 TTTAACTGGTAGAGCCTCCGTTAGAAACTCTTTTTCGATGTCTACGGCCTCTGTTATTAT 39564 || | || | | |||||| || ||| | | || || ||||| | | ||||| Sbjct 16036571 CTTCAGGGGCAAGGTCTCCGTGAGGAACCCCTGCTCTATCCGAACGGCATTAATAATTAT 16036512 Query 39565 CGATGTTACTACCTCATCACTCGGTGGATGCAATAAATGTTTAAACATTAAGCAGGCGAA 39624 | ||| || | ||| || | | ||||| ||||| | |||||| || Sbjct 16036511 TTCCTTCACTCTCTGCTTGGAAGGTTTGTGGACCAGGTGTTTGAACATCAGGCAGGCAAA 16036452 Query 39625 GTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGCAT 39684 |||||| |||| ||||||||||| ||||| | ||| || ||||| || | |||||||| Sbjct 16036451 GTCACAGTGTAAACCCTCATCTCTGCTAATAAGTTCATTGGAAAACATGGGGCCAGGCAT 16036392 Query 39685 TAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCTTC 39744 || |||| || |||||||| ||||| | |||||||| |||||||||||||| ||||| Sbjct 16036391 CAGGTCACGTTTCTTGAGCCAGAATATCGTCGCAAAAGAACCAGAAAAGAAGATTCCTTC 16036332 Query 39745 TACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTGTATCATTATGTA---TCCACTT 39801 || || ||||| | |||| | || ||||| | | || || | |||| | Sbjct 16036331 CACAGCAGCAAAGTCCACAACCCGTTCCCCGTAGGTAGCCTCTTTGTCCCCAGTCCAATG 16036272 Query 39802 CTGTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGATA 39861 | ||||| || || ||||||||||||||||||||||| || | || || |||||| | Sbjct 16036271 CAAGGCCCAGTCTGCCTTCTTCTTTACACAAGGCATTGTCTCGAGGGCGTTGAAGAGAAA 16036212 Query 39862 ATGTTTTTCATCACTATCTTTAACATATGTATCTATTAACAGACTATACATTTCTGAATG 39921 | |||| | |||||||||||| || || || | ||||| ||||| || ||||| Sbjct 16036211 TTCCCTTTCTTTGGAATCTTTAACATAAGTGTCAATGAGGAGACTGTACATCTCAGAATG 16036152 Query 39922 GATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATTTGTACCTC 39981 ||||||||| || || || | || || || ||||| | ||||| ||||| || || || Sbjct 16036151 GATGTTTTCCATGGCAATTCGGAAGCCATAGAAACAGCGGGCTTCTGTAATCTGAACTTC 16036092 Query 39982 TGAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCACTAGCGGCAAAAAATGC 40041 | | ||| | ||| |||| |||||||| ||||| |||||||| | ||||| || || Sbjct 16036091 TTGGCTAAACCGCTCCACCAAGTTTTCATTTACTATGCCATCACTCGGCGCAAAGAAAGC 16036032 Query 40042 CAATACATGTTTAATAAAATATTTTTCATCGGGTGTCAATTTATTCC-AGTCATTGATAT 40100 || || || | ||| ||| | || || || || | ||||| || | || | Sbjct 16036031 CAGAACGTGGGATAGAAAGTATCTCTCCTCAGGCTTC-AGGGATTCCTGGTGCTGAATGT 16035973 Query 40101 CTTTTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCTGCCTTTTTGTACATGT 40160 | || || | ||| || ||||||||||||||||| || ||||| || || | ||||| | Sbjct 16035972 CCTTGGAAAGATCCACCTCTTCAGCTGTCCAAAAGGAAGCCTCAGCTTTCTCATACATCT 16035913 Query 40161 TCCATATATCA 40171 ||| |||||| Sbjct 16035912 GCCAAATATCA 16035902 >seq7820 Length=31847680 Score = 226 bits (250), Expect = 4e-54 Identities = 620/942 (66%), Gaps = 17/942 (2%) Strand=Plus/Minus Query 39271 TTAAAAGTCAACATCTAAAGAAAAATGATTATCTTCTTG----TGACATAACTCCCATTT 39326 ||| |||||| ||| | | |||| ||| | || ||| |||||| ||||| || Sbjct 14844002 TTATAAGTCAGTATCCACGGTAAAAGAATTCT-TTGTTGGACTTGACATCACTCCTATCC 14843944 Query 39327 TTTGGTATTCACCAACGCGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTTT 39386 | || || | || | | ||||| || || ||||| || ||||||| ||| ||||| | Sbjct 14843943 TCTGATACTGGCCTCCTCTCTTCTCAAAGAAGTTAGTCTTCCCTTCCAGTGAAATATTCT 14843884 Query 39387 CCATGAAATCAAACGGATTAGTTGCATTATAtttttttttAAATCCTAATTCTGAAATCA 39446 || | | ||||| ||||| | | | | || |||| |||| ||| | | | Sbjct 14843883 CCCTAAGGTCAAATGGATTTTCTACTCTGGAAACCTTGCTAAAACCTAGTTCCTACCTAA 14843824 Query 39447 ATCTATCTGCAACAAATTCTATGTA-TGTTTTCATCATTTCACAATTCATTCCTATGAGT 39505 || ||||| | ||||| || || || ||| | | | || ||||| || ||||| Sbjct 14843823 GTCAGTCTGCCATGAATTCAATATACTGCTTTACTAACGTG-CAGTTCATCCCAATGAGC 14843765 Query 39506 TTAACTGGTAGAGCCTCCGTTAGAAACTCTTTTTCGATGTCTACGGCCTCTGTTATTATC 39565 || | || | ||||| | || ||||| | || || ||||| | | ||||| Sbjct 14843764 TTCGCGGGCAAGGCCTCTGGGAGGAACTCCTGGTCTATCCTAACGGCATTGATAATTATT 14843705 Query 39566 GATGTTACTACCTCATCACTCGGTGGATGCAATAAATGTTTAAACATTAAGCAGGCGAAG 39625 | ||| || || ||| ||| | | ||||| ||||| | |||||| ||| Sbjct 14843704 TCCTTCACTCTCTGCTCTGAAGGTTTATGGACCAGGTGTTTGAACATCAGGCAGGCAAAG 14843645 Query 39626 TCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAAT-GTGAGTCCAGGCAT 39684 | |||| ||||||||||| ||||| | || || ||||| | ||| |||||||| Sbjct 14843644 TTGTGGTGTAAACCCTCATCTCTGCTAATAAGCTCATTGGAAAACCGCGAGGCCAGGCAT 14843585 Query 39685 TAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCTTC 39744 || | | || |||||||| ||||| | ||| |||| ||| ||||| |||| ||||| Sbjct 14843584 CAGGCTGCATTTCTTGAGCCAGAATATCGACGCAGAAGAACCAAAAAAGGAGATTCCTTC 14843525 Query 39745 TACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTGTATCATTATGT---ATCCACTT 39801 || ||||| | ||| | || ||||| | | || || | | ||| Sbjct 14843524 CGTGGCAGCAAAGTCCACATCCCATTCCCCGTAGGTAGCCTCTTTGTCCCCAACCCAACG 14843465 Query 39802 CTGTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGATA 39861 | ||||| || || |||||| || ||||||||||||| || || | || |||||| | Sbjct 14843464 CAAGGCCCAGTCTGCCTTCTTCCTTCCACAAGGCATTGTCTCGATGGTGTTGAAGAGAAA 14843405 Query 39862 ATGTTTTTCATCACTATCTTTAACATATGTATCTATTAACAGACTATACATTTCTGAATG 39921 | | | || | |||||||| ||| || || | | |||||| |||| || ||||| Sbjct 14843404 TTCTGTCTCTTTGGAATCTTTAATATAAGTGTCAGTGAGGAGACTACACATCTCAGAATG 14843345 Query 39922 GATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATTTGTACCTC 39981 ||||||||| || || || || || || || ||||| | ||||| || || | || || Sbjct 14843344 GATGTTTTCCATGGCAATTTGGAAGCCATAGAAACAGCAGGCTTCTGTCATCTCAACTTC 14843285 Query 39982 TGAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCACTAGCGGCAAAAAATGC 40041 | | | | | ||| |||| |||||||| ||||| ||| |||| || ||||| || || Sbjct 14843284 TTGGCCACACCGCTCCACCAAGTTTTCATTTACTATGCCAACACTCGCCGCAAAGAAAGC 14843225 Query 40042 C--AAT----ACATGTTTAATAAAATATTTTTCATCGGGTGTCAATTTATTCCAGTCATT 40095 | ||| || || ||||||| | | || || || ||| | ||||| | Sbjct 14843224 CAGAATGTGAACGTGGGGTATAAAATCTCTCTCCTCAGGCTTCAGCGATTCCCAGTGTTG 14843165 Query 40096 GATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCTGCCTTTTTGTA 40155 || || || || | || || ||||||||||||||||| || ||||| || || || | Sbjct 14843164 AATGTCCTTGGAAAGATTCACCTCTTCAGCTGTCCAAAAGGAAGCCTCAGCTTTCTTACA 14843105 Query 40156 CATGTTCCATATATCACGATATTGTATTGGAAAAATAACAAA 40197 || | ||| | |||| | || | || || || || ||||| Sbjct 14843104 TATCTGCCAAAGATCATGGTACTTCATAGGGAAGATGACAAA 14843063 >seq7870 Length=10551609 Score = 123 bits (136), Expect = 3e-23 Identities = 107/133 (80%), Gaps = 0/133 (0%) Strand=Plus/Minus Query 68719 TGAAATTCCCCAGATAACACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGAT 68778 |||||||| || || || ||||| ||||| || || || |||||||| ||||| | || Sbjct 10335165 TGAAATTCTCCTGACAAGACTCTGCGAGTATAGATGTTGCTGGTATAAGGTTCAATGGAC 10335106 Query 68779 TCATTATTTCCCAGAATTTGAGCAGTTGATGCAGTTGGCATAGGTGCCACCAATAAACTA 68838 ||||||||||||||||| ||||||||||| ||||| ||||| || || | | |||||| Sbjct 10335105 TCATTATTTCCCAGAATCTGAGCAGTTGAAGCAGTAGGCATCGGGGCAATAAGTAAACTG 10335046 Query 68839 TTTCTAAGACCAT 68851 ||||| | ||||| Sbjct 10335045 TTTCTTATACCAT 10335033 Score = 120 bits (132), Expect = 4e-22 Identities = 129/171 (75%), Gaps = 0/171 (0%) Strand=Plus/Minus Query 68441 TCCATCCGTAGAAATGCATACTTGTTAGTTTGGAATAACTTGGATCGGCTATATGAATAT 68500 |||| ||||||||||||||||| || |||||| ||| | || || || || || || | Sbjct 10337845 TCCAGCCGTAGAAATGCATACTGGTGAGTTTGCCATAGTTAGGCTCAGCAATGTGGATGT 10337786 Query 68501 TCATCGATTGACTTTGATCGATGAAAGCTCCTCTATCTGCCGCCATTTTTATAATACTCT 68560 ||| ||||| |||||||| |||||||| ||||| || || ||||| || | || | | Sbjct 10337785 TCAAAGATTGGCTTTGATCAATGAAAGCACCTCTTTCAGCTGCCATCTTAAGAACGGTTT 10337726 Query 68561 TTTGAGGAATTTCCCAAATAGTCTTAAAAATCTGTTTGATATCATCTGGAA 68611 | || | ||||||||| | ||||||| ||| || || | ||||| |||| Sbjct 10337725 TCTGTGAAATTTCCCACACAGTCTTATAAAGTTGCTTCAGGTCATCAGGAA 10337675 Score = 111 bits (122), Expect = 2e-19 Identities = 127/171 (74%), Gaps = 0/171 (0%) Strand=Plus/Minus Query 70331 CATCACTAAATAGtttttttGTTTCCTTGTGTAAATTTGATATGGCTATTCTGGCTGCTA 70390 || |||| || | ||| |||||||| ||||| || || || | ||| || || ||||| | Sbjct 10311661 CACCACTGAACACTTTCTTTGTTTCTTTGTGCAAGTTGGAGACGGCAATCCTTGCTGCCA 10311602 Query 70391 GAATAGCATAGTCAGGATGTTGTGTAGTACAAGTAGCTGCTATTTCCGCAGCTAACGTAT 70450 | || |||||||||||||| | || || | || || ||| | || ||||| || |||| Sbjct 10311601 GGATGGCATAGTCAGGATGCTTAGTCGTCAAGGTCGCAGCTGTCTCAGCAGCCAAAGTAT 10311542 Query 70451 CTAATTCTATAGTTGTAACTCCGTTATATAGCCCTTGAATAACTTTCATGG 70501 ||| ||| | ||| || || || | |||| ||||| || |||||||||| Sbjct 10311541 CTAGTTCCACAGTGGTGACCCCACTGTATAAGCCTTGGATTACTTTCATGG 10311491 Score = 93.3 bits (102), Expect = 6e-14 Identities = 101/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 69595 ACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAGAGATCTCTGGTTCTATTT 69654 ||||||||||| || ||||| ||||||||||| || | || || || |||| | | | Sbjct 10325155 ACTCGTTTCATGAAGAGATCTGGAATCCAAAGGGCAAAGAAAAGGTCCCTGGCACGCTGT 10325096 Query 69655 TCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCATAATATCAGAATGCCATGGT 69714 ||||| |||||||| || || || | ||| |||||||| | ||| || ||||||| || Sbjct 10325095 TCTTCCTTTCCTGTGTTCTTCTTTAAATCCAGAAACTCAAAAATGTCTAAATGCCAAGGC 10325036 Query 69715 TCTAGATATATCGC 69728 || || || || || Sbjct 10325035 TCCAGGTAAATAGC 10325022 Score = 87.8 bits (96), Expect = 2e-12 Identities = 106/142 (75%), Gaps = 2/142 (1%) Strand=Plus/Minus Query 69991 GTTCCCGCATTAAATAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTG 70050 || || ||||| || | || ||||| || || || ||||| || |||||||| || ||| Sbjct 10316807 GTACCAGCATTGAAGAGAGTGGGAGAGGCATGGGTAAACCACTTCTCAGAAAGAAGGTTG 10316748 Query 70051 TATGTTTCAATAGCTGATTCTATATCCCACTGA-TGAATTCCTATCGCGACACGCATCAA 70109 |||||||||||||| | || ||||| ||| ||||| || | | || | |||||| Sbjct 10316747 TATGTTTCAATAGCAGCATCAATATCTT-CTGCGTGAATCCCCACAGACACCCTCATCAA 10316689 Query 70110 CATATGCTGAGGTCGTTCTACC 70131 |||||| || |||| |||| || Sbjct 10316688 CATATGTTGTGGTCTTTCTGCC 10316667 Score = 86.0 bits (94), Expect = 9e-12 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 69507 ATATAGCCGTTCGAATTCATCTCCCCAAACATCATCCAATCCAGGACATTCATTTGGACA 69566 ||||||| || ||||| ||||||||||| ||||||| |||||||||||||||||||| Sbjct 10325829 ATATAGCTTCTCAAATTCCTCTCCCCAAACCTCATCCAGACCAGGACATTCATTTGGACA 10325770 Query 69567 CATCAATGACCA 69578 || ||| ||||| Sbjct 10325769 CAACAAAGACCA 10325758 >seq7842 Length=42459490 Score = 123 bits (136), Expect = 3e-23 Identities = 103/126 (82%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 39639 CCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGCATTAGACCACGCTTTT 39698 |||||||||| ||||| | ||| || ||||| ||||| |||||||| || || || || | Sbjct 7548465 CCTCATCTCTGCTAATAAGTTCATTGGAAAACGTGAGGCCAGGCATCAGGCCGCGTTTCT 7548406 Query 39699 TGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCTTCTACTGCTGCAAATG 39758 ||||||| ||||| | |||||||| |||||||||||||| ||||| || || ||||| | Sbjct 7548405 TGAGCCAGAATATTGACGCAAAAGAACCAGAAAAGAAGATTCCTTCCACAGCAGCAAAAG 7548346 Query 39759 CAACAA 39764 | |||| Sbjct 7548345 CCACAA 7548340 Score = 84.2 bits (92), Expect = 3e-11 Identities = 82/106 (77%), Gaps = 0/106 (0%) Strand=Plus/Minus Query 39877 ATCTTTAACATATGTATCTATTAACAGACTATACATTTCTGAATGGATGTTTTCAATCGC 39936 |||||||| ||| || || || | ||||| ||||| || |||||||||||||| || || Sbjct 7546436 ATCTTTAATATAAGTGTCAATGAGGAGACTGTACATCTCAGAATGGATGTTTTCCATGGC 7546377 Query 39937 CATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATTTGTACCTCT 39982 || || || || || ||||| | ||||| ||||| || |||||| Sbjct 7546376 AATTTGGAAGCCATAGAAACAGCGGGCTTCTGTAATCTGAACCTCT 7546331 >seq7786 Length=83011774 Score = 116 bits (128), Expect = 5e-21 Identities = 106/134 (79%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 39641 TCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGCATTAGACCACGCTTTTTG 39700 |||||||| || || | ||| || ||||| |||||||| ||||| ||||| | || || Sbjct 48121152 TCATCTCTGCTGATGAGTTCATTGGAAAACGTGAGTCCGGGCATGAGACCTCTTTTCTTT 48121211 Query 39701 AGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCTTCTACTGCTGCAAATGCA 39760 ||||| ||||| |||||||||||||| || ||||| || |||||||| || ||||| || Sbjct 48121212 AGCCAGAATATAGCAGCAAAAGATCCCGAGAAGAAAATCCCTTCTACAGCAGCAAAAGCC 48121271 Query 39761 ACAAGTCTCTCTCC 39774 || | ||| || || Sbjct 48121272 ACCACTCTTTCCCC 48121285 Score = 89.7 bits (98), Expect = 7e-13 Identities = 94/123 (76%), Gaps = 3/123 (2%) Strand=Plus/Plus Query 39987 AAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCACTAGCGGCAAAAAATGCCAATA 40046 |||||||| || |||||||||||||| ||||||||||| || |||||||| || |||| Sbjct 48126727 AAAATCTTACC---AAATTTTCATTCACAATTCCATCACTGGCTGCAAAAAAGGCTAATA 48126783 Query 40047 CATGTTTAATAAAATATTTTTCATCGGGTGTCAATTTATTCCAGTCATTGATATCTTTTG 40106 || |||||||| || ||||| | | | | || ||||||| | || ||| |||| Sbjct 48126784 TGTGAGAGATAAAATACTTCTCATCCGATTTAAGCTTGTTCCAGTGAGGGAGATCCTTTG 48126843 Query 40107 ATA 40109 ||| Sbjct 48126844 ATA 48126846 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686841208174080