Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Neomonachus_20schauinslandi_20[genbank_20GCA_5F002201575.1_202017-
06-20] 7,872 sequences; 2,400,917,536 total letters
Query= NC_028491.1
Length=98392
Score E
Sequences producing significant alignments: (Bits) Value
seq9 105 4e-18
seq7857 87.8 1e-12
>seq9
Length=2205763
Score = 105 bits (116), Expect = 4e-18
Identities = 158/221 (71%), Gaps = 4/221 (2%)
Strand=Plus/Plus
Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548
|| || | |||||| || || ||| ||| || || || ||||| ||||| || || ||
Sbjct 1749334 AGGCGAAGCACCAAGTGCAGGGTGGACTCTTTCTGGATATTATAGTCTGACAGAGTACGG 1749393
Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608
| ||||| || ||||| || ||||| | | |||||| ||||| ||||| | ||||||
Sbjct 1749394 CCATCTTCCAGCTGTTTGCCCGCAAAAACCAGACGCTGCTGGTCAGGCGGGATGCCCTCC 1749453
Query 34609 TTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGT--CTTCGCTCTCCACTTCCACG 34665
|||||| ||| ||| | ||| || | ||| |||| || |||| ||| || | |
Sbjct 1749454 TTGTCTTGGAT-TTTGGCTTTGACATTCTCAATGGTGTCACTGGGCTCGACACCTCAAGG 1749512
Query 34666 GTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
|| || || || || || | || |||||||| ||||||||
Sbjct 1749513 GTGATGGTCTTGCCCGTCAGGGTCTTCACAAAGATCTGCAT 1749553
>seq7857
Length=43258702
Score = 87.8 bits (96), Expect = 1e-12
Identities = 159/233 (68%), Gaps = 0/233 (0%)
Strand=Plus/Plus
Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538
||| ||||| || ||| |||| || || || ||| || || ||||||||||| ||
Sbjct 31543672 GCCACCTCTCAGGTGCAGAACCAGGTGCAGGGTCGACTCTTTCTGGATGTTATAATCAGA 31543731
Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598
||| || || | ||||| || || || || ||||| || | | ||| ||||| || ||
Sbjct 31543732 AAGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAAATGAGCCTCTGCTGGTCAGGGGG 31543791
Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAAAATTGTGTCTTCGCTCTCCAC 34658
| ||||| || ||| |||||| || | | || |||| | ||||||
Sbjct 31543792 GATGCCCTCTTTATCTTGGATCTTGGCCTTCACATTTTCGATGATGTCACTGGGCTCCAC 31543851
Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATGTTGA 34711
|||| || || || || ||||||| || ||||| || |||||||| ||||
Sbjct 31543852 CTCCAGGGGGATGGTCTTGCCGGTTAGGGTCTTCACGAAGATCTGCATTTTGA 31543904
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 314699404842176
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |