Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Neomonachus_20schauinslandi_20[genbank_20GCA_5F002201575.1_202017-
06-20] 7,872 sequences; 2,400,917,536 total letters
Query= NC_028636.1
Length=135952
Score E
Sequences producing significant alignments: (Bits) Value
seq9 114 1e-20
seq7823 102 7e-17
seq7828 91.5 1e-13
seq7865 87.8 2e-12
seq7857 86.0 5e-12
seq7767 86.0 5e-12
>seq9
Length=2205763
Score = 114 bits (126), Expect = 1e-20
Identities = 165/232 (71%), Gaps = 2/232 (1%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTG--GAACCGT 27045
|||||||| ||||| || || ||||| |||||| | || || ||||| ||| || ||
Sbjct 1749553 ATGCAGATCTTTGTGAAGACCCTGACGGGCAAGACCATCACCCTTGAGGTGTCGAGCCCA 1749494
Query 27046 CCGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATC 27105
||| | ||||||| |||||| ||||| |||||||| || ||||| || || || |
Sbjct 1749493 GTGACACCATTGAGAATGTCAAAGCCAAAATCCAAGACAAGGAGGGCATCCCGCCTGACC 1749434
Query 27106 AACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACA 27165
| |||||| | | | || |||||||| ||||||| | || | || || || |
Sbjct 1749433 AGCAGCGTCTGGTTTTTGCGGGCAAACAGCTGGAAGATGGCCGTACTCTGTCAGACTATA 1749374
Query 27166 ACATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
| || || || ||||| ||| | || ||||| | || | |||||||||||
Sbjct 1749373 ATATCCAGAAAGAGTCCACCCTGCACTTGGTGCTTCGCCTACGGGGTGGCAT 1749322
>seq7823
Length=12955506
Score = 102 bits (112), Expect = 7e-17
Identities = 160/229 (70%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046
||||||||| || || || || |||||||||||| | || || || || ||||| ||
Sbjct 3355325 CATGCAGATCTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTGGAGGTGGAGCCCAG 3355384
Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106
||| | || || | || || || || ||||| ||||| ||||| || || || ||
Sbjct 3355385 TGACACCATCGAAAACGTGAAGGCCAAGATCCAAGATAAAGAGGGCATCCCCCCTGACCA 3355444
Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166
||| | | || | || ||||| || ||||||| | || |||| ||||||||
Sbjct 3355445 GCAGAGGCTCATTTTTGCAGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCTGATTACAA 3355504
Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGC 27215
||| || || ||||| || | || ||||| | ||| || ||||||||
Sbjct 3355505 CATCCAGAAAGAGTCAACTCTCCACCTGGTTCTCCGTCTGAGGGGTGGC 3355553
Score = 82.4 bits (90), Expect = 7e-11
Identities = 140/203 (69%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 27015 GGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATTGAGATGGTCAAACAAAAA 27074
|||||| | || || || || ||||| || ||| | || || | || || ||
Sbjct 3355125 GGCAAGACCATCACCCTGGAGGTGGAGCCCAGTGACACCATCGAAAATGTGAAGGCCAAG 3355184
Query 27075 ATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAATATACGCCGGCAAACAA 27134
|| ||||| ||||| ||||| || || || || ||| | | || | || ||||| ||
Sbjct 3355185 ATCCAAGATAAAGAGGGCATCCCCCCTGACCAGCAGAGGCTCATCTTTGCAGGCAAGCAG 3355244
Query 27135 TTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAGGAGTCGACCTTACATTTG 27194
||||||| | || |||| ||||||||||| || || ||||||||| | || ||
Sbjct 3355245 CTGGAAGATGGCCGCACTCTTTCTGATTACAACATCCAGAAAGAGTCGACCCTGCACCTG 3355304
Query 27195 GTTTTGCGTTTGCGGGGTGGCAT 27217
|| |||| || ||||||||||
Sbjct 3355305 GTCCTGCGCCTGAGGGGTGGCAT 3355327
>seq7828
Length=21597463
Score = 91.5 bits (100), Expect = 1e-13
Identities = 150/214 (70%), Gaps = 2/214 (1%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || || ||||| || || || ||| | || ||||| || || ||||| ||
Sbjct 14213586 ATGCAGATTTTCGTGAAAACCCTTACGGGGAAGACCATCACTCTCGAGGTTGAACCCTCG 14213527
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
|| | || || | | || || ||||| | || ||||| || || || |||||
Sbjct 14213526 GATACAATAGAAAATATAAAGGCCAAGATTCAGAATAAGGAAGGAATTCCTCCTGATCAG 14213467
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTT-TCCGATTACAA 27166
||| | | || | || ||||| ||| ||||||| | || || || || || |||||
Sbjct 14213466 CAGAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGA-CGTCCTTTGTCTGACTACAA 14213408
Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTG 27200
||||||||||||||| || | ||| | || |||
Sbjct 14213407 CATTCAAAAGGAGTCCACTCTTCATCTTGTGTTG 14213374
>seq7865
Length=68117122
Score = 87.8 bits (96), Expect = 2e-12
Identities = 159/229 (69%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| ||||| | ||| |||| ||||| |||| ||||| || ||||||||
Sbjct 16996458 ATGCAGATGTTTGTGAGGACT--GACCAGCAAGACTATCACTCTAGAGGTGGAACCCATT 16996515
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCA-TACCACCCGATCA 27106
||| | || ||| || || || || ||||| |||||||||| |||| | || ||
Sbjct 16996516 GACACCATCAAGAATGTGAAGGCTAAGATCCAAGATAAAGAAGGCAGTACCCTCTGACCA 16996575
Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166
||| | | || | || ||||| || ||||||| | || |||| ||||||||
Sbjct 16996576 GCAGAGGCTCATCTTTGCAGGCAAGCAGCTGGAAGATGGCCTCACT-TTTCTGATTACAA 16996634
Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGC 27215
||| || || | ||| || | || ||||| | | | || ||||||||
Sbjct 16996635 CATCCAGAAAGGGTCCACTCTGCACCTGGTTCTCCATCTGAGGGGTGGC 16996683
>seq7857
Length=43258702
Score = 86.0 bits (94), Expect = 5e-12
Identities = 137/197 (70%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || || |||||||| | || ||| | || ||||| || | ||||| ||
Sbjct 24177955 ATGCAGATTTTCGTGAAAACTCTTATGGGGAAGACCATCACTCTCGAGGCTGAACCCTCG 24178014
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
|| | || | | || || || ||||| || || ||||| || || || |||||
Sbjct 24178015 GATACAATACAAAATGTAAAGGCCAAGATTCAGGATAAGGAAGGAATTCCTCCTGATCAG 24178074
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||| | || || | || ||||| ||| ||||||| | || | || || ||||||
Sbjct 24178075 CAGAGATTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGCACTCTGTCTGACTACAAC 24178134
Query 27168 ATTCAAAAGGAGTCGAC 27184
| |||||||||||| ||
Sbjct 24178135 ACTCAAAAGGAGTCCAC 24178151
>seq7767
Length=50048226
Score = 86.0 bits (94), Expect = 5e-12
Identities = 137/197 (70%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || || ||||| || || || ||| | || || || || || || || ||
Sbjct 33066956 ATGCAGATTTTCGTGAAAACCCTTACGGGGAAGACCATCACCCTCGAGGTTGATCCCTCG 33066897
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
|| | || || | || || || ||||| || || ||||| || || || |||||
Sbjct 33066896 GATACAATAGAAAATGTAAAGGCCAAGATTCAGGATAAGGAAGGAATTCCTCCTGATCAG 33066837
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||| | | || | || ||||| ||| ||||||| | || | || || ||||||
Sbjct 33066836 CAGAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGCACTTTGTCTGACTACAAC 33066777
Query 27168 ATTCAAAAGGAGTCGAC 27184
|||||||||||||| ||
Sbjct 33066776 ATTCAAAAGGAGTCTAC 33066760
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 434875604029440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |