Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Neomonachus_20schauinslandi_20[genbank_20GCA_5F002201575.1_202017-
06-20] 7,872 sequences; 2,400,917,536 total letters
Query= NC_029132.1
Length=140122
Score E
Sequences producing significant alignments: (Bits) Value
seq7771 159 3e-34
seq7792 138 1e-27
seq7785 107 2e-18
>seq7771
Length=57971676
Score = 159 bits (176), Expect = 3e-34
Identities = 132/161 (82%), Gaps = 0/161 (0%)
Strand=Plus/Plus
Query 6620 TGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAACCCC 6679
|| ||||||||||| |||||||| ||||| || || |||||||| ||||| || | |||
Sbjct 7629524 TGTGCGATCATGTAGGTGAGCAGGGCGTAGCTGGCGATGTTGAAGGGCACACCCAGGCCC 7629583
Query 6680 ATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTCGCGACGTAGAATTGG 6739
||||| || || | || || ||||| ||||||||||| || ||| | |||||||| |||
Sbjct 7629584 ATGTCCCCTGACCTCTGGTACAGCTGACAGGACAGCTCGCCGTTCACCACGTAGAACTGG 7629643
Query 6740 CAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATC 6780
||||||| |||||||| ||||| ||||||||||| |||||
Sbjct 7629644 CAGAGGGCATGGCACGGAGGGAGGGCCATCAGAGGAAGATC 7629684
Score = 159 bits (176), Expect = 3e-34
Identities = 132/161 (82%), Gaps = 0/161 (0%)
Strand=Plus/Minus
Query 34565 GATCTCCCTCTGATGGCGCTCCCCCCGTGCCACACCCTCTGCCAATTCTACGTCGCGAAT 34624
||||| ||||||||||| ||||| |||||||| |||||||||| |||||||| | |||
Sbjct 7629684 GATCTTCCTCTGATGGCCCTCCCTCCGTGCCATGCCCTCTGCCAGTTCTACGTGGTGAAC 7629625
Query 34625 GGGGAGCTGTCCTGCCAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTC 34684
|| ||||||||||| ||||| || || | || || |||||||| | || ||||| |||
Sbjct 7629624 GGCGAGCTGTCCTGTCAGCTGTACCAGAGGTCAGGGGACATGGGCCTGGGTGTGCCCTTC 7629565
Query 34685 AACATTGCTAGTTACGCTCTGCTCACGTACATGATCGCTCA 34725
||||| || || ||||| |||||||| ||||||||||| ||
Sbjct 7629564 AACATCGCCAGCTACGCCCTGCTCACCTACATGATCGCACA 7629524
Score = 93.3 bits (102), Expect = 4e-14
Identities = 114/153 (75%), Gaps = 2/153 (1%)
Strand=Plus/Plus
Query 6899 TACTCCGCCCCAAAGTGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTCCTCC 6958
|| || |||||||| || |||||||| || || || || ||||| || || ||||| ||
Sbjct 7632052 TATTCTGCCCCAAAATGCCTCCACTGAAAGCCATAAACTGGGCCTAAATCCCCCTCTTCT 7632111
Query 6959 CGAGATGG-GAACCCCCGCTTGTCCAGAAAGTCTCGAGACCCGTGAGCGTCCCAGATCTT 7017
| | ||| ||| ||| | |||||| |||||||||||||| | || |||||||| ||
Sbjct 7632112 CT-GTTGGAGAATCCCAGGCTGTCCAAGAAGTCTCGAGACCCATTGGCATCCCAGATTTT 7632170
Query 7018 CACCCCCCGGGACGAGAGCTCCTTGGTGTTCGT 7050
||| ||| || || || ||||| | ||| ||
Sbjct 7632171 CACTCCCTTTGAAGACAGTTCCTTAGCGTTTGT 7632203
Score = 93.3 bits (102), Expect = 4e-14
Identities = 114/153 (75%), Gaps = 2/153 (1%)
Strand=Plus/Minus
Query 34295 ACGAACACCAAGGAGCTCTCGTCCCGGGGGGTGAAGATCTGGGACGCTCACGGGTCTCGA 34354
|| ||| | ||||| || || || ||| ||||| |||||||| || | |||||||||
Sbjct 7632203 ACAAACGCTAAGGAACTGTCTTCAAAGGGAGTGAAAATCTGGGATGCCAATGGGTCTCGA 7632144
Query 34355 GACTTTCTGGACAAGCGGGGGTTC-CCATCTCGGGAGGAGGGCGACTTGGGCCCGGTCTA 34413
||||| |||||| | ||| ||| ||| | | || ||||| || || ||||| || ||
Sbjct 7632143 GACTTCTTGGACAGCCTGGGATTCTCCAAC-AGAGAAGAGGGGGATTTAGGCCCAGTTTA 7632085
Query 34414 CGGGTTCCAGTGGAGACACTTTGGGGCGGAGTA 34446
|| || |||||||| || |||||||| || ||
Sbjct 7632084 TGGCTTTCAGTGGAGGCATTTTGGGGCAGAATA 7632052
>seq7792
Length=42198347
Score = 138 bits (152), Expect = 1e-27
Identities = 460/712 (65%), Gaps = 24/712 (3%)
Strand=Plus/Plus
Query 34220 TTTCCGCTGCTGACGACGAAACGTGTGTACTGGAAGGGCGTGGTCGAGGAGCTGCTGTGG 34279
||||| ||| |||| |||| | ||| | ||| ||||| || | |||||| || |||||
Sbjct 19339987 TTTCCTCTGTTGACAACGACATGTGAATTCTGAAAGGGTGTTTTGGAGGAGTTGTTGTGG 19340046
Query 34280 TTCGTGAGGGGGGCCACGAACACCAAGGAGCTCTCGTCCCGGGGGGTGAAGATCTGGGAC 34339
|| | | ||| | | ||| | || | || | || ||| |||| ||||||||
Sbjct 19340047 TTTATCAAGGGATCTAAAAACGCTGAGAAACTGCCTTCTAAGGGAGTGACAATCTGGGAT 19340106
Query 34340 GCTCACGGGTCTCGAGACTTTCTGGACAAGCGGGGGTTC-CCATCTCGGGAGGAGGGCGA 34398
| | | || ||||||| ||||| | ||| ||| ||| | || || || ||
Sbjct 19340107 ACCAATGCCTCCTGAGACTTCTCGGACAGTCTGGGATTCTCCAACA---GAAGAAGGGGA 19340163
Query 34399 CTTGGGCCCGGTCTACGGGTTCCAGTGGAGA--CACTTTGGGGCGGAGTATCGGGGGAGC 34456
|| ||||| || || || | ||||||||| || || ||||| || | | |
Sbjct 19340164 TTTAGGCCCAGTTTATGGCTCTCAGTGGAGAGGCATTTGGGGGCAGAATTCAAAGACAAA 19340223
Query 34457 GAAGCGGACTATTCGGGACAGGGAGCGGACCAGCTGCAGTACGTGATCGACACCT-TGAA 34515
|| | || ||||| || || |||| ||||| | ||| | ||| | | ||| ||||
Sbjct 19340224 GATTCAGATTATTCAGGTCAAGGAGTAGACCAACCGCAAAAGGTGTTTGGCACAACTGAA 19340283
Query 34516 GCGGAACCCTGATGACAGAAGGATCGTGATGTGCGCGTGGAACCCGAAGGATCTCCCTCT 34575
| ||||| | |||||||| ||| | ||| | ||||| || || | || | |||
Sbjct 19340284 ACCAAACCCA-AGGACAGAAGAATCATCCTGTATGGTTGGAATCCAAAAGCACTTCGTCT 19340342
Query 34576 GATGGCGCTCCCCCCGTGCCACACCCTCTGCCAATTCTACGTCGCGAATGGGGAGCTGTC 34635
|||| || || | ||||| |||| ||||| ||| ||| | || ||| |||||||
Sbjct 19340343 CCTGGCCCTACCTCTCTGCCATGCCCTTTGCCAGATCTCCGTGGTGACTGGTAAGCTGTC 19340402
Query 34636 CTGCCAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGT---------------GCC 34680
||||||||| | | | ||||||||||| || | || |||
Sbjct 19340403 CTGCCAGCTGGACTGGAGGGCAGGAGACATGGGCTTGGCTGTCTCTTGCCCTCAATGGCC 19340462
Query 34681 GTTCAACATTGCTAGTTACGCTCTGCTCACGTACATGATCGCTCATGTCGTGGGGTTGGT 34740
|||||||| || | ||| |||||||| ||||||||||| || || || | |
Sbjct 19340463 CTTCAACATGGCCCGCCTCGCGCTGCTCACCTACATGATCGCACACATCACAGGCTGGAA 19340522
Query 34741 TCCTGGGGAGCTGGTGCATACGTTGGGGGATGCGCATATCTACCTGAACCACATCGAGCG 34800
|| || | | || ||||| || | ||||| ||||| |||||||| ||||| ||
Sbjct 19340523 GCCAGGCAACTTAGTACATAC-TTTGAAGATGCACATATTTACCTGAATCACATTGAATC 19340581
Query 34801 GCTCCGGATCCAGCTGCAACGAGAGCCCCGACCGTTCCCCCAGCTCAAAATTATTCGAGC 34860
|| || ||||| || ||||| || | || |||| |||||||||| ||| |
Sbjct 19340582 TCTGAAAATGCAGCTTCAGCGAGAACCAAGGCCTTTCCTGAAGCTCAAAATCCTTCAAAA 19340641
Query 34861 CGTCACCTCAATCGATGACTTTAGGAGCGAGGACTTCGTGTTGGAAGGGTAC 34912
|| ||||| ||||||| | | || ||||| | | ||||||||
Sbjct 19340642 AGTTGAGACAATCCATGACTTCAAGGCTGAAGACTTTCAGATCCAAGGGTAC 19340693
Score = 138 bits (152), Expect = 1e-27
Identities = 460/712 (65%), Gaps = 24/712 (3%)
Strand=Plus/Minus
Query 6433 GTACCCTTCCAACACGAAGTCCTCGCTCCTAAAGTCATCGATTGAGGTGACGGCTCGAAT 6492
|||||||| | | ||||| || | | ||||||| ||||| || | |||
Sbjct 19340693 GTACCCTTGGATCTGAAAGTCTTCAGCCTTGAAGTCATGGATTGTCTCAACTTTTTGAAG 19340634
Query 6493 AATTTTGAGCTGGGGGAACGGTCGGGGCTCTCGTTGCAGCTGGATCCGGAGCCGCTCGAT 6552
|||||||||| |||| || | || ||||| || ||||| || || || ||
Sbjct 19340633 GATTTTGAGCTTCAGGAAAGGCCTTGGTTCTCGCTGAAGCTGCATTTTCAGAGATTCAAT 19340574
Query 6553 GTGGTTCAGGTAGATATGCGCATCCCCCAACGTATGCACCAGCTCCCCAGGAACCAACCC 6612
||| |||||||| ||||| ||||| | || ||||| || | | || || | | ||
Sbjct 19340573 GTGATTCAGGTAAATATGTGCATCTTCAAA-GTATGTACTAAGTTGCCTGGCTTCCAGCC 19340515
Query 6613 CACGACATGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGC----- 6667
|| || ||||||||||| |||||||| ||| | || |||||||| |||
Sbjct 19340514 TGTGATGTGTGCGATCATGTAGGTGAGCAGCGCGAGGCGGGCCATGTTGAAGGGCCATTG 19340455
Query 6668 ----------ACCCCTAACCCCATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTC 6717
|| | || ||||||||||| | | | ||||||||||||||||
Sbjct 19340454 AGGGCAAGAGACAGCCAAGCCCATGTCTCCTGCCCTCCAGTCCAGCTGGCAGGACAGCTT 19340395
Query 6718 CCCATTCGCGACGTAGAATTGGCAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAG 6777
||| || | ||| ||| ||||| |||| ||||| | || || |||| ||| | ||
Sbjct 19340394 ACCAGTCACCACGGAGATCTGGCAAAGGGCATGGCAGAGAGGTAGGGCCAGGAGACGAAG 19340335
Query 6778 ATCCTTCGGGTTCCACGCGCACATCACGATCCTTCTGTCATCAGGGTTCCGCTTCA-AGG 6836
| || || ||||| | ||| | ||| |||||||| | ||||| | |||| |
Sbjct 19340334 TGCTTTTGGATTCCAACCATACAGGATGATTCTTCTGTCCT-TGGGTTTGGTTTCAGTTG 19340276
Query 6837 TGTCGATCACGTACTGCAGCTGGTCCGCTCCCTGTCCCGAATAGTCCGCTTCGCTCCCCC 6896
|| | | ||| | ||| | ||||| |||| || || ||||| || | || | |
Sbjct 19340275 TGCCAAACACCTTTTGCGGTTGGTCTACTCCTTGACCTGAATAATCTGAATCTTTGTCTT 19340216
Query 6897 GATACTCCGCCCCAAAGTG--TCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTC 6954
| || ||||| || || ||||||||| | || || || ||||| || || || ||
Sbjct 19340215 TGAATTCTGCCCCCAAATGCCTCTCCACTGAGAGCCATAAACTGGGCCTAAATCCCCTTC 19340156
Query 6955 CTCCCGAGATGG-GAACCCCCGCTTGTCCAGAAAGTCTCGAGACCCGTGAGCGTCCCAGA 7013
|| | ||| ||| ||| | ||||| ||||||| || | | | |||||||
Sbjct 19340155 TTC---TGTTGGAGAATCCCAGACTGTCCGAGAAGTCTCAGGAGGCATTGGTATCCCAGA 19340099
Query 7014 TCTTCACCCCCCGGGACGAGAGCTCCTTGGTGTTCGTGGCCCCCCTCACGAACCACAGCA 7073
| |||| ||| || | || | || | ||| | | ||| | | ||||||| ||
Sbjct 19340098 TTGTCACTCCCTTAGAAGGCAGTTTCTCAGCGTTTTTAGATCCCTTGATAAACCACAACA 19340039
Query 7074 GCTCCTCGACCACGCCCTTCCAGTACACACGTTTCGTCGTCAGCAGCGGAAA 7125
|||||| | || ||||| ||| | ||| | |||| |||| ||| |||||
Sbjct 19340038 ACTCCTCCAAAACACCCTTTCAGAATTCACATGTCGTTGTCAACAGAGGAAA 19339987
>seq7785
Length=4775541
Score = 107 bits (118), Expect = 2e-18
Identities = 195/284 (69%), Gaps = 1/284 (0%)
Strand=Plus/Plus
Query 6543 GCCGCTCGATGTGGTTCAGGTAGATATGCGCATCCCCCAACGTATGCACCAGCTCCCCAG 6602
|| ||| |||||| |||||||| ||||| || || ||||| ||| | | | | |
Sbjct 3441718 GCAGCTTGATGTGATTCAGGTAAATATGTGCCTCTCCCAAAGTAATTATGAAGTTAGCTG 3441777
Query 6603 GAACCAACCCCACGACATGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAA-TGTTG 6661
| || || || || | || |||| |||||||| || || ||| || ||
Sbjct 3441778 GCTTCAGGCCTGTGATGTGTGAGACTGTGTAGGTGAGCAGGGCCTACACAGCTGGTGATG 3441837
Query 6662 AACGGCACCCCTAACCCCATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCA 6721
|| ||||| || | |||||| || ||| | || | | ||||||||||||||| |||
Sbjct 3441838 AAGGGCACACCCAGGCCCATGGCTTGCGACCTGTGGCAAACCTGGCAGGACAGCTCACCA 3441897
Query 6722 TTCGCGACGTAGAATTGGCAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATCC 6781
||| | | ||||| |||| |||| |||| || || || | || ||||| ||| ||
Sbjct 3441898 TTCACCGCATAGAACCGGCACAGGGCGTGGTGTGGAGGCAGGGTCAGGAGAGGAAGAGCC 3441957
Query 6782 TTCGGGTTCCACGCGCACATCACGATCCTTCTGTCATCAGGGTT 6825
|| || ||||| | |||| | ||| ||||||||| |||||||
Sbjct 3441958 TTTGGATTCCAACCACACAGGATGATTCTTCTGTCACCAGGGTT 3442001
Score = 107 bits (118), Expect = 2e-18
Identities = 195/284 (69%), Gaps = 1/284 (0%)
Strand=Plus/Minus
Query 34520 AACCCTGATGACAGAAGGATCGTGATGTGCGCGTGGAACCCGAAGGATCTCCCTCTGATG 34579
||||||| ||||||||| ||| | |||| | ||||| || |||| ||| ||||| ||
Sbjct 3442001 AACCCTGGTGACAGAAGAATCATCCTGTGTGGTTGGAATCCAAAGGCTCTTCCTCTCCTG 3441942
Query 34580 GCGCTCCCCCCGTGCCACACCCTCTGCCAATTCTACGTCGCGAATGGGGAGCTGTCCTGC 34639
| || || || |||| |||| |||| ||||| | | |||||| ||||||||||||
Sbjct 3441941 ACCCTGCCTCCACACCACGCCCTGTGCCGGTTCTATGCGGTGAATGGTGAGCTGTCCTGC 3441882
Query 34640 CAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTCAACA-TTGCTAGTTA 34698
||| | | || | ||| || |||||| | || ||||| |||| || ||| ||
Sbjct 3441881 CAGGTTTGCCACAGGTCGCAAGCCATGGGCCTGGGTGTGCCCTTCATCACCAGCTGTGTA 3441822
Query 34699 CGCTCTGCTCACGTACATGATCGCTCATGTCGTGGGGTTGGTTCCTGGGGAGCTGGTGCA 34758
|| |||||||| |||| || | || || || || || | | | |
Sbjct 3441821 GGCCCTGCTCACCTACACAGTCTCACACATCACAGGCCTGAAGCCAGCTAACTTCATAAT 3441762
Query 34759 TACGTTGGGGGATGCGCATATCTACCTGAACCACATCGAGCGGC 34802
||| ||||| || || ||||| |||||||| |||||| ||| ||
Sbjct 3441761 TACTTTGGGAGAGGCACATATTTACCTGAATCACATCAAGCTGC 3441718
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448218290979840
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