Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neomonachus_20schauinslandi_20[genbank_20GCA_5F002201575.1_202017- 06-20] 7,872 sequences; 2,400,917,536 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq7771 159 3e-34 seq7792 138 1e-27 seq7785 107 2e-18 >seq7771 Length=57971676 Score = 159 bits (176), Expect = 3e-34 Identities = 132/161 (82%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 6620 TGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAACCCC 6679 || ||||||||||| |||||||| ||||| || || |||||||| ||||| || | ||| Sbjct 7629524 TGTGCGATCATGTAGGTGAGCAGGGCGTAGCTGGCGATGTTGAAGGGCACACCCAGGCCC 7629583 Query 6680 ATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTCGCGACGTAGAATTGG 6739 ||||| || || | || || ||||| ||||||||||| || ||| | |||||||| ||| Sbjct 7629584 ATGTCCCCTGACCTCTGGTACAGCTGACAGGACAGCTCGCCGTTCACCACGTAGAACTGG 7629643 Query 6740 CAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATC 6780 ||||||| |||||||| ||||| ||||||||||| ||||| Sbjct 7629644 CAGAGGGCATGGCACGGAGGGAGGGCCATCAGAGGAAGATC 7629684 Score = 159 bits (176), Expect = 3e-34 Identities = 132/161 (82%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 34565 GATCTCCCTCTGATGGCGCTCCCCCCGTGCCACACCCTCTGCCAATTCTACGTCGCGAAT 34624 ||||| ||||||||||| ||||| |||||||| |||||||||| |||||||| | ||| Sbjct 7629684 GATCTTCCTCTGATGGCCCTCCCTCCGTGCCATGCCCTCTGCCAGTTCTACGTGGTGAAC 7629625 Query 34625 GGGGAGCTGTCCTGCCAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTC 34684 || ||||||||||| ||||| || || | || || |||||||| | || ||||| ||| Sbjct 7629624 GGCGAGCTGTCCTGTCAGCTGTACCAGAGGTCAGGGGACATGGGCCTGGGTGTGCCCTTC 7629565 Query 34685 AACATTGCTAGTTACGCTCTGCTCACGTACATGATCGCTCA 34725 ||||| || || ||||| |||||||| ||||||||||| || Sbjct 7629564 AACATCGCCAGCTACGCCCTGCTCACCTACATGATCGCACA 7629524 Score = 93.3 bits (102), Expect = 4e-14 Identities = 114/153 (75%), Gaps = 2/153 (1%) Strand=Plus/Plus Query 6899 TACTCCGCCCCAAAGTGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTCCTCC 6958 || || |||||||| || |||||||| || || || || ||||| || || ||||| || Sbjct 7632052 TATTCTGCCCCAAAATGCCTCCACTGAAAGCCATAAACTGGGCCTAAATCCCCCTCTTCT 7632111 Query 6959 CGAGATGG-GAACCCCCGCTTGTCCAGAAAGTCTCGAGACCCGTGAGCGTCCCAGATCTT 7017 | | ||| ||| ||| | |||||| |||||||||||||| | || |||||||| || Sbjct 7632112 CT-GTTGGAGAATCCCAGGCTGTCCAAGAAGTCTCGAGACCCATTGGCATCCCAGATTTT 7632170 Query 7018 CACCCCCCGGGACGAGAGCTCCTTGGTGTTCGT 7050 ||| ||| || || || ||||| | ||| || Sbjct 7632171 CACTCCCTTTGAAGACAGTTCCTTAGCGTTTGT 7632203 Score = 93.3 bits (102), Expect = 4e-14 Identities = 114/153 (75%), Gaps = 2/153 (1%) Strand=Plus/Minus Query 34295 ACGAACACCAAGGAGCTCTCGTCCCGGGGGGTGAAGATCTGGGACGCTCACGGGTCTCGA 34354 || ||| | ||||| || || || ||| ||||| |||||||| || | ||||||||| Sbjct 7632203 ACAAACGCTAAGGAACTGTCTTCAAAGGGAGTGAAAATCTGGGATGCCAATGGGTCTCGA 7632144 Query 34355 GACTTTCTGGACAAGCGGGGGTTC-CCATCTCGGGAGGAGGGCGACTTGGGCCCGGTCTA 34413 ||||| |||||| | ||| ||| ||| | | || ||||| || || ||||| || || Sbjct 7632143 GACTTCTTGGACAGCCTGGGATTCTCCAAC-AGAGAAGAGGGGGATTTAGGCCCAGTTTA 7632085 Query 34414 CGGGTTCCAGTGGAGACACTTTGGGGCGGAGTA 34446 || || |||||||| || |||||||| || || Sbjct 7632084 TGGCTTTCAGTGGAGGCATTTTGGGGCAGAATA 7632052 >seq7792 Length=42198347 Score = 138 bits (152), Expect = 1e-27 Identities = 460/712 (65%), Gaps = 24/712 (3%) Strand=Plus/Plus Query 34220 TTTCCGCTGCTGACGACGAAACGTGTGTACTGGAAGGGCGTGGTCGAGGAGCTGCTGTGG 34279 ||||| ||| |||| |||| | ||| | ||| ||||| || | |||||| || ||||| Sbjct 19339987 TTTCCTCTGTTGACAACGACATGTGAATTCTGAAAGGGTGTTTTGGAGGAGTTGTTGTGG 19340046 Query 34280 TTCGTGAGGGGGGCCACGAACACCAAGGAGCTCTCGTCCCGGGGGGTGAAGATCTGGGAC 34339 || | | ||| | | ||| | || | || | || ||| |||| |||||||| Sbjct 19340047 TTTATCAAGGGATCTAAAAACGCTGAGAAACTGCCTTCTAAGGGAGTGACAATCTGGGAT 19340106 Query 34340 GCTCACGGGTCTCGAGACTTTCTGGACAAGCGGGGGTTC-CCATCTCGGGAGGAGGGCGA 34398 | | | || ||||||| ||||| | ||| ||| ||| | || || || || Sbjct 19340107 ACCAATGCCTCCTGAGACTTCTCGGACAGTCTGGGATTCTCCAACA---GAAGAAGGGGA 19340163 Query 34399 CTTGGGCCCGGTCTACGGGTTCCAGTGGAGA--CACTTTGGGGCGGAGTATCGGGGGAGC 34456 || ||||| || || || | ||||||||| || || ||||| || | | | Sbjct 19340164 TTTAGGCCCAGTTTATGGCTCTCAGTGGAGAGGCATTTGGGGGCAGAATTCAAAGACAAA 19340223 Query 34457 GAAGCGGACTATTCGGGACAGGGAGCGGACCAGCTGCAGTACGTGATCGACACCT-TGAA 34515 || | || ||||| || || |||| ||||| | ||| | ||| | | ||| |||| Sbjct 19340224 GATTCAGATTATTCAGGTCAAGGAGTAGACCAACCGCAAAAGGTGTTTGGCACAACTGAA 19340283 Query 34516 GCGGAACCCTGATGACAGAAGGATCGTGATGTGCGCGTGGAACCCGAAGGATCTCCCTCT 34575 | ||||| | |||||||| ||| | ||| | ||||| || || | || | ||| Sbjct 19340284 ACCAAACCCA-AGGACAGAAGAATCATCCTGTATGGTTGGAATCCAAAAGCACTTCGTCT 19340342 Query 34576 GATGGCGCTCCCCCCGTGCCACACCCTCTGCCAATTCTACGTCGCGAATGGGGAGCTGTC 34635 |||| || || | ||||| |||| ||||| ||| ||| | || ||| ||||||| Sbjct 19340343 CCTGGCCCTACCTCTCTGCCATGCCCTTTGCCAGATCTCCGTGGTGACTGGTAAGCTGTC 19340402 Query 34636 CTGCCAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGT---------------GCC 34680 ||||||||| | | | ||||||||||| || | || ||| Sbjct 19340403 CTGCCAGCTGGACTGGAGGGCAGGAGACATGGGCTTGGCTGTCTCTTGCCCTCAATGGCC 19340462 Query 34681 GTTCAACATTGCTAGTTACGCTCTGCTCACGTACATGATCGCTCATGTCGTGGGGTTGGT 34740 |||||||| || | ||| |||||||| ||||||||||| || || || | | Sbjct 19340463 CTTCAACATGGCCCGCCTCGCGCTGCTCACCTACATGATCGCACACATCACAGGCTGGAA 19340522 Query 34741 TCCTGGGGAGCTGGTGCATACGTTGGGGGATGCGCATATCTACCTGAACCACATCGAGCG 34800 || || | | || ||||| || | ||||| ||||| |||||||| ||||| || Sbjct 19340523 GCCAGGCAACTTAGTACATAC-TTTGAAGATGCACATATTTACCTGAATCACATTGAATC 19340581 Query 34801 GCTCCGGATCCAGCTGCAACGAGAGCCCCGACCGTTCCCCCAGCTCAAAATTATTCGAGC 34860 || || ||||| || ||||| || | || |||| |||||||||| ||| | Sbjct 19340582 TCTGAAAATGCAGCTTCAGCGAGAACCAAGGCCTTTCCTGAAGCTCAAAATCCTTCAAAA 19340641 Query 34861 CGTCACCTCAATCGATGACTTTAGGAGCGAGGACTTCGTGTTGGAAGGGTAC 34912 || ||||| ||||||| | | || ||||| | | |||||||| Sbjct 19340642 AGTTGAGACAATCCATGACTTCAAGGCTGAAGACTTTCAGATCCAAGGGTAC 19340693 Score = 138 bits (152), Expect = 1e-27 Identities = 460/712 (65%), Gaps = 24/712 (3%) Strand=Plus/Minus Query 6433 GTACCCTTCCAACACGAAGTCCTCGCTCCTAAAGTCATCGATTGAGGTGACGGCTCGAAT 6492 |||||||| | | ||||| || | | ||||||| ||||| || | ||| Sbjct 19340693 GTACCCTTGGATCTGAAAGTCTTCAGCCTTGAAGTCATGGATTGTCTCAACTTTTTGAAG 19340634 Query 6493 AATTTTGAGCTGGGGGAACGGTCGGGGCTCTCGTTGCAGCTGGATCCGGAGCCGCTCGAT 6552 |||||||||| |||| || | || ||||| || ||||| || || || || Sbjct 19340633 GATTTTGAGCTTCAGGAAAGGCCTTGGTTCTCGCTGAAGCTGCATTTTCAGAGATTCAAT 19340574 Query 6553 GTGGTTCAGGTAGATATGCGCATCCCCCAACGTATGCACCAGCTCCCCAGGAACCAACCC 6612 ||| |||||||| ||||| ||||| | || ||||| || | | || || | | || Sbjct 19340573 GTGATTCAGGTAAATATGTGCATCTTCAAA-GTATGTACTAAGTTGCCTGGCTTCCAGCC 19340515 Query 6613 CACGACATGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGC----- 6667 || || ||||||||||| |||||||| ||| | || |||||||| ||| Sbjct 19340514 TGTGATGTGTGCGATCATGTAGGTGAGCAGCGCGAGGCGGGCCATGTTGAAGGGCCATTG 19340455 Query 6668 ----------ACCCCTAACCCCATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTC 6717 || | || ||||||||||| | | | |||||||||||||||| Sbjct 19340454 AGGGCAAGAGACAGCCAAGCCCATGTCTCCTGCCCTCCAGTCCAGCTGGCAGGACAGCTT 19340395 Query 6718 CCCATTCGCGACGTAGAATTGGCAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAG 6777 ||| || | ||| ||| ||||| |||| ||||| | || || |||| ||| | || Sbjct 19340394 ACCAGTCACCACGGAGATCTGGCAAAGGGCATGGCAGAGAGGTAGGGCCAGGAGACGAAG 19340335 Query 6778 ATCCTTCGGGTTCCACGCGCACATCACGATCCTTCTGTCATCAGGGTTCCGCTTCA-AGG 6836 | || || ||||| | ||| | ||| |||||||| | ||||| | |||| | Sbjct 19340334 TGCTTTTGGATTCCAACCATACAGGATGATTCTTCTGTCCT-TGGGTTTGGTTTCAGTTG 19340276 Query 6837 TGTCGATCACGTACTGCAGCTGGTCCGCTCCCTGTCCCGAATAGTCCGCTTCGCTCCCCC 6896 || | | ||| | ||| | ||||| |||| || || ||||| || | || | | Sbjct 19340275 TGCCAAACACCTTTTGCGGTTGGTCTACTCCTTGACCTGAATAATCTGAATCTTTGTCTT 19340216 Query 6897 GATACTCCGCCCCAAAGTG--TCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTC 6954 | || ||||| || || ||||||||| | || || || ||||| || || || || Sbjct 19340215 TGAATTCTGCCCCCAAATGCCTCTCCACTGAGAGCCATAAACTGGGCCTAAATCCCCTTC 19340156 Query 6955 CTCCCGAGATGG-GAACCCCCGCTTGTCCAGAAAGTCTCGAGACCCGTGAGCGTCCCAGA 7013 || | ||| ||| ||| | ||||| ||||||| || | | | ||||||| Sbjct 19340155 TTC---TGTTGGAGAATCCCAGACTGTCCGAGAAGTCTCAGGAGGCATTGGTATCCCAGA 19340099 Query 7014 TCTTCACCCCCCGGGACGAGAGCTCCTTGGTGTTCGTGGCCCCCCTCACGAACCACAGCA 7073 | |||| ||| || | || | || | ||| | | ||| | | ||||||| || Sbjct 19340098 TTGTCACTCCCTTAGAAGGCAGTTTCTCAGCGTTTTTAGATCCCTTGATAAACCACAACA 19340039 Query 7074 GCTCCTCGACCACGCCCTTCCAGTACACACGTTTCGTCGTCAGCAGCGGAAA 7125 |||||| | || ||||| ||| | ||| | |||| |||| ||| ||||| Sbjct 19340038 ACTCCTCCAAAACACCCTTTCAGAATTCACATGTCGTTGTCAACAGAGGAAA 19339987 >seq7785 Length=4775541 Score = 107 bits (118), Expect = 2e-18 Identities = 195/284 (69%), Gaps = 1/284 (0%) Strand=Plus/Plus Query 6543 GCCGCTCGATGTGGTTCAGGTAGATATGCGCATCCCCCAACGTATGCACCAGCTCCCCAG 6602 || ||| |||||| |||||||| ||||| || || ||||| ||| | | | | | Sbjct 3441718 GCAGCTTGATGTGATTCAGGTAAATATGTGCCTCTCCCAAAGTAATTATGAAGTTAGCTG 3441777 Query 6603 GAACCAACCCCACGACATGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAA-TGTTG 6661 | || || || || | || |||| |||||||| || || ||| || || Sbjct 3441778 GCTTCAGGCCTGTGATGTGTGAGACTGTGTAGGTGAGCAGGGCCTACACAGCTGGTGATG 3441837 Query 6662 AACGGCACCCCTAACCCCATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCA 6721 || ||||| || | |||||| || ||| | || | | ||||||||||||||| ||| Sbjct 3441838 AAGGGCACACCCAGGCCCATGGCTTGCGACCTGTGGCAAACCTGGCAGGACAGCTCACCA 3441897 Query 6722 TTCGCGACGTAGAATTGGCAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATCC 6781 ||| | | ||||| |||| |||| |||| || || || | || ||||| ||| || Sbjct 3441898 TTCACCGCATAGAACCGGCACAGGGCGTGGTGTGGAGGCAGGGTCAGGAGAGGAAGAGCC 3441957 Query 6782 TTCGGGTTCCACGCGCACATCACGATCCTTCTGTCATCAGGGTT 6825 || || ||||| | |||| | ||| ||||||||| ||||||| Sbjct 3441958 TTTGGATTCCAACCACACAGGATGATTCTTCTGTCACCAGGGTT 3442001 Score = 107 bits (118), Expect = 2e-18 Identities = 195/284 (69%), Gaps = 1/284 (0%) Strand=Plus/Minus Query 34520 AACCCTGATGACAGAAGGATCGTGATGTGCGCGTGGAACCCGAAGGATCTCCCTCTGATG 34579 ||||||| ||||||||| ||| | |||| | ||||| || |||| ||| ||||| || Sbjct 3442001 AACCCTGGTGACAGAAGAATCATCCTGTGTGGTTGGAATCCAAAGGCTCTTCCTCTCCTG 3441942 Query 34580 GCGCTCCCCCCGTGCCACACCCTCTGCCAATTCTACGTCGCGAATGGGGAGCTGTCCTGC 34639 | || || || |||| |||| |||| ||||| | | |||||| |||||||||||| Sbjct 3441941 ACCCTGCCTCCACACCACGCCCTGTGCCGGTTCTATGCGGTGAATGGTGAGCTGTCCTGC 3441882 Query 34640 CAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTCAACA-TTGCTAGTTA 34698 ||| | | || | ||| || |||||| | || ||||| |||| || ||| || Sbjct 3441881 CAGGTTTGCCACAGGTCGCAAGCCATGGGCCTGGGTGTGCCCTTCATCACCAGCTGTGTA 3441822 Query 34699 CGCTCTGCTCACGTACATGATCGCTCATGTCGTGGGGTTGGTTCCTGGGGAGCTGGTGCA 34758 || |||||||| |||| || | || || || || || | | | | Sbjct 3441821 GGCCCTGCTCACCTACACAGTCTCACACATCACAGGCCTGAAGCCAGCTAACTTCATAAT 3441762 Query 34759 TACGTTGGGGGATGCGCATATCTACCTGAACCACATCGAGCGGC 34802 ||| ||||| || || ||||| |||||||| |||||| ||| || Sbjct 3441761 TACTTTGGGAGAGGCACATATTTACCTGAATCACATCAAGCTGC 3441718 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448218290979840