Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Neomonachus_20schauinslandi_20[genbank_20GCA_5F002201575.1_202017-
06-20] 7,872 sequences; 2,400,917,536 total letters
Query= NC_029997.1
Length=105667
Score E
Sequences producing significant alignments: (Bits) Value
seq7767 131 1e-25
seq7828 127 1e-24
seq7857 123 2e-23
seq7858 102 6e-17
seq7764 102 6e-17
seq9 89.7 3e-13
seq7823 86.0 4e-12
>seq7767
Length=50048226
Score = 131 bits (144), Expect = 1e-25
Identities = 149/200 (75%), Gaps = 0/200 (0%)
Strand=Plus/Minus
Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667
|| |||||||||||||| |||||||| ||||| || || ||||| ||||| ||||| ||
Sbjct 33066959 AAGATGCAGATTTTCGTGAAAACCCTTACGGGGAAGACCATCACCCTCGAGGTTGATCCC 33066900
Query 23668 ACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGAT 23727
|||| || | |||| |||| || ||| || || ||||| | || || |||
Sbjct 33066899 TCGGATACAATAGAAAATGTAAAGGCCAAGATTCAGGATAAGGAAGGAATTCCTCCTGAT 33066840
Query 23728 CAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTAC 23787
|| ||| | | || ||||| ||||| ||||||||||| | ||||||||| || |||
Sbjct 33066839 CAGCAGAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGCACTTTGTCTGACTAC 33066780
Query 23788 AACATACAAAAAGAGTCCAC 23807
||||| ||||| ||||| ||
Sbjct 33066779 AACATTCAAAAGGAGTCTAC 33066760
>seq7828
Length=21597463
Score = 127 bits (140), Expect = 1e-24
Identities = 159/218 (73%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667
|| |||||||||||||| |||||||| ||||| || || ||||||||||| ||||| ||
Sbjct 14213589 AAGATGCAGATTTTCGTGAAAACCCTTACGGGGAAGACCATCACTCTCGAGGTTGAACCC 14213530
Query 23668 ACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGAT 23727
|||| || | |||| |||| || ||| | || ||||| | || || |||
Sbjct 14213529 TCGGATACAATAGAAAATATAAAGGCCAAGATTCAGAATAAGGAAGGAATTCCTCCTGAT 14213470
Query 23728 CAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTAC 23787
|| ||| | | || ||||| ||||| ||||||||||| | ||| |||| || |||
Sbjct 14213469 CAGCAGAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGTCCTTTGTCTGACTAC 14213410
Query 23788 AACATACAAAAAGAGTCCACATTACATTTAGTTTTAAG 23825
||||| ||||| |||||||| | ||| | || || ||
Sbjct 14213409 AACATTCAAAAGGAGTCCACTCTTCATCTTGTGTTGAG 14213372
>seq7857
Length=43258702
Score = 123 bits (136), Expect = 2e-23
Identities = 158/218 (72%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667
|| |||||||||||||| ||||| || | ||| || || ||||||||||| | ||| ||
Sbjct 24177952 AAGATGCAGATTTTCGTGAAAACTCTTATGGGGAAGACCATCACTCTCGAGGCTGAACCC 24178011
Query 23668 ACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGAT 23727
|||| || | ||| |||| || ||| || || ||||| | || || |||
Sbjct 24178012 TCGGATACAATACAAAATGTAAAGGCCAAGATTCAGGATAAGGAAGGAATTCCTCCTGAT 24178071
Query 23728 CAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTAC 23787
|| ||| | || || ||||| ||||| ||||||||||| | ||||||| | || |||
Sbjct 24178072 CAGCAGAGATTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGCACTCTGTCTGACTAC 24178131
Query 23788 AACATACAAAAAGAGTCCACATTACATTTAGTTTTAAG 23825
|||| ||||| |||||||| | ||| | || |||||
Sbjct 24178132 AACACTCAAAAGGAGTCCACTCTTCATCTTGTGTTAAG 24178169
>seq7858
Length=29646629
Score = 102 bits (112), Expect = 6e-17
Identities = 151/214 (71%), Gaps = 0/214 (0%)
Strand=Plus/Minus
Query 23612 TGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACGG 23671
||||||||||| | |||||||||||||| || || ||||| ||||| ||| || |||
Sbjct 12424960 TGCAGATTTTCCTGAAAACCCTCACGGGGAAGACCATCACCCTCGAGCCTGAACCCTCGG 12424901
Query 23672 ACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAAC 23731
| || | |||| || | || ||| || || ||||| | || || ||||| |
Sbjct 12424900 ATACAATAGAAAATGTACAGGCCAAGATTCAGGATAAGGAAGGAATTCCTCCTGATCAGC 12424841
Query 23732 AGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAACA 23791
|| | | || |||| ||||| ||||||||| | | | ||||||| || |||||||
Sbjct 12424840 AGAGACTGATCGTTGCTGGCAAGCAACTGGAAAATGGATGCACTTTGTCTGACTACAACA 12424781
Query 23792 TACAAAAAGAGTCCACATTACATTTAGTTTTAAG 23825
| ||||| ||||| || | ||| | || || ||
Sbjct 12424780 TTCAAAAGGAGTCTACTCTTCATCTTGTGTTGAG 12424747
>seq7764
Length=47977530
Score = 102 bits (112), Expect = 6e-17
Identities = 154/218 (71%), Gaps = 2/218 (1%)
Strand=Plus/Minus
Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667
|| ||||||||||| || |||||||| | ||| || || ||||||||||| ||||| |||
Sbjct 26988426 AAGATGCAGATTTTTGTGAAAACCCTTATGGGGAAGACCATCACTCTCGAGGTTGAATCC 26988367
Query 23668 ACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGAT 23727
| | || || |||| |||| || || || || ||||| | || || |||
Sbjct 26988366 TCAGGTACAGTAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGAT 26988307
Query 23728 CAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTAC 23787
|| || | | || || | ||||| |||||||||||| || ||||| | || |||
Sbjct 26988306 CAGCA--GACTGATCTTCACTGGCAAGCAACTGGAAGACAGACAAACTTTGTGTGACTAC 26988249
Query 23788 AACATACAAAAAGAGTCCACATTACATTTAGTTTTAAG 23825
| ||| ||||| |||||||| | ||| | || || ||
Sbjct 26988248 AGCATTCAAAAGGAGTCCACTCTTCATCTTGTGTTGAG 26988211
>seq9
Length=2205763
Score = 89.7 bits (98), Expect = 3e-13
Identities = 142/200 (71%), Gaps = 4/200 (2%)
Strand=Plus/Minus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTT--GACTCCA 23668
|||||||| || || || ||||| ||||| || || ||||| || || || || |||
Sbjct 1749553 ATGCAGATCTTTGTGAAGACCCTGACGGGCAAGACCATCACCCTTGAGGTGTCGAGCCCA 1749494
Query 23669 CGGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGAT 23727
||||| |||| ||| | ||| | |||| | ||||| || || | ||||| ||
Sbjct 1749493 GTGACACCATTGAGAATGTCAAAGCCAAAA-TCCAAGACAAGGAGGGCATCCCGCCTGAC 1749435
Query 23728 CAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTAC 23787
|| |||||| | | ||||| |||||||| |||||||| | || ||| | || ||
Sbjct 1749434 CAGCAGCGTCTGGTTTTTGCGGGCAAACAGCTGGAAGATGGCCGTACTCTGTCAGACTAT 1749375
Query 23788 AACATACAAAAAGAGTCCAC 23807
|| || || |||||||||||
Sbjct 1749374 AATATCCAGAAAGAGTCCAC 1749355
>seq7823
Length=12955506
Score = 86.0 bits (94), Expect = 4e-12
Identities = 137/197 (70%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||| ||||| || ||||| || || || || ||||| || || || || |||
Sbjct 3355326 ATGCAGATCTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTGGAGGTGGAGCCCAGT 3355385
Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730
||||| | |||| | || || || || ||||| || | || || || ||
Sbjct 3355386 GACACCATCGAAAACGTGAAGGCCAAGATCCAAGATAAAGAGGGCATCCCCCCTGACCAG 3355445
Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790
||| | | || ||||| ||||| || |||||||| | |||||| | |||||||||
Sbjct 3355446 CAGAGGCTCATTTTTGCAGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCTGATTACAAC 3355505
Query 23791 ATACAAAAAGAGTCCAC 23807
|| || |||||||| ||
Sbjct 3355506 ATCCAGAAAGAGTCAAC 3355522
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 337977171358976
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |