Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neomonachus_20schauinslandi_20[genbank_20GCA_5F002201575.1_202017- 06-20] 7,872 sequences; 2,400,917,536 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq7771 172 4e-38 >seq7771 Length=57971676 Score = 172 bits (190), Expect = 4e-38 Identities = 137/165 (83%), Gaps = 0/165 (0%) Strand=Plus/Plus Query 29714 AGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGC 29773 || || |||| ||| || |||||||| ||||| || | ||||||||||||||| |||||| Sbjct 7629512 AGGCCTGTGATGTGTGCGATCATGTAGGTGAGCAGGGCGTAGCTGGCGATGTTGAAGGGC 7629571 Query 29774 ACCCCGAGCCCCATGTCCCCTGACCTCTGGTAGAGCTGGCACGAGAGCTCTCCGTCGCTC 29833 || || || ||||||||||||||||||||||| ||||| || || ||||| |||| | Sbjct 7629572 ACACCCAGGCCCATGTCCCCTGACCTCTGGTACAGCTGACAGGACAGCTCGCCGTTCACC 7629631 Query 29834 ACGTAAAACTGACACATGGCATGGCACGGAGGAAGGGCCATGAGA 29878 ||||| ||||| || | ||||||||||||||| |||||||| ||| Sbjct 7629632 ACGTAGAACTGGCAGAGGGCATGGCACGGAGGGAGGGCCATCAGA 7629676 Score = 84.2 bits (92), Expect = 2e-11 Identities = 106/146 (73%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 30017 AAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAG 30076 |||||||||||||| || || || || || || | || |||||||| |||| ||| Sbjct 7632064 AAATGCCTCCACTGAAAGCCATAAACTGGGCCTAAATCCCCCTCTTCTCTGTTGGAGAAT 7632123 Query 30077 CCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCG 30136 ||| ||||||| ||||||| || || ||||| |||||||| || || ||||| Sbjct 7632124 CCCAGGCTGTCCAAGAAGTCTCGAGACCCATTGGCATCCCAGATTTTCACTCCCTTTGAA 7632183 Query 30137 GAGAGCTCTTTGGAGTTTGTGGACCC 30162 || || || || | |||||| || || Sbjct 7632184 GACAGTTCCTTAGCGTTTGTAGATCC 7632209 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406124232702592