Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neomonachus_20schauinslandi_20[genbank_20GCA_5F002201575.1_202017- 06-20] 7,872 sequences; 2,400,917,536 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq7767 268 8e-67 seq7820 183 3e-41 seq7842 89.7 4e-13 seq7786 89.7 4e-13 >seq7767 Length=50048226 Score = 268 bits (296), Expect = 8e-67 Identities = 584/867 (67%), Gaps = 17/867 (2%) Strand=Plus/Minus Query 4271 TACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAACGAAATATTTTCCATAAAATCAAA 4330 ||||| ||| || ||||| || | ||||| | |||||||| ||||| || ||||| Sbjct 16036731 TACTCTCTTCTCAAAGAAGTT-----TCCCTTCCAGTGAAATATTCTCCATGAAGTCAAA 16036677 Query 4331 CGGATTAGTTGCGTTGTAATGTTTTTCACACTTTAGAGCTACAAGCAATCGGTCAGCTAC 4390 ||||| | | || || || || | ||| | | | | ||||| || || Sbjct 16036676 TGGATTTTCTACTCTGAAAACCTTGCCAAAACCTAGCTCCAGCATAAGTCGGTGTGCCAC 16036617 Query 4391 AAATTCTATATACTGGCTCATGAGTTCGCAGTTAATTCCAATTAATCTCACAGGTAGCGC 4450 ||| || ||| |||| |||| | ||| || || ||||| | ||| || | | Sbjct 16036616 AAACTCAATACACTGCTTCATTAACGTGCAATTCATCCCAATGAGCTTCAGGGGCAAGGT 16036557 Query 4451 GTATGTCAAAAACTCTTGTTCTATAGTTACGGCTTCTGTGATTATATCTTTTATTTTATC 4510 | || | ||| | || ||||| ||||| | | ||||| || || | | | | Sbjct 16036556 CTCCGTGAGGAACCCCTGCTCTATCCGAACGGCATTAATAATTATTTCCTTCACTCTCTG 16036497 Query 4511 TTTAGATGGTTTATTTACTAAGTATCCAAACAATAAACACGCAAAATCACAATGCAAACC 4570 || || ||||| | || | || | |||| | || ||||| ||||| || ||||| Sbjct 16036496 CTTGGAAGGTTTGTGGACCAGGTGTTTGAACATCAGGCAGGCAAAGTCACAGTGTAAACC 16036437 Query 4571 TTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGGGCATTAAACCTCTCTTTTT 4630 || ||||||||||| ||||| || |||||| | || ||||| | | | || || Sbjct 16036436 CTCATCTCTGCTAATAAGTTCATTGGAAAACATGGGGCCAGGCATCAGGTCACGTTTCTT 16036377 Query 4631 AAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCCTTCTACGGCGGCAAACGC 4690 ||||| ||||| | ||||| || ||||||||||| || ||||| || || ||||| | Sbjct 16036376 GAGCCAGAATATCGTCGCAAAAGAACCAGAAAAGAAGATTCCTTCCACAGCAGCAAAGTC 16036317 Query 4691 TACTAATCGGGACCCGAACG-AGCTGGCTTTGTCTTTAATCCATTTTAATGCCCAGTTAG 4749 || | || |||| | | ||| ||||||| | |||| | || ||||||| | Sbjct 16036316 CACAACCCGTTCCCCGTAGGTAGC-CTCTTTGTCCCCAGTCCAATGCAAGGCCCAGTCTG 16036258 Query 4750 CTTTTTTCTTAACGCACGGAATTGTGTATATAGCGTTAAA---TAATTTACTTTTTTCAA 4806 | || ||||| || || || ||||| | | ||||| || |||| |||| || Sbjct 16036257 CCTTCTTCTTTACACAAGGCATTGTCTCGAGGGCGTTGAAGAGAAATTCCCTTTCTT--- 16036201 Query 4807 ATGG-GTCTTGAATATAAGTGTCTATTAGTAGGCTATACATTTCAGAATGTATATTTTCT 4865 ||| |||| || ||||||||| || || || || ||||| |||||||| || ||||| Sbjct 16036200 -TGGAATCTTTAACATAAGTGTCAATGAGGAGACTGTACATCTCAGAATGGATGTTTTCC 16036142 Query 4866 ATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTCTGTTACTTGAACTTCGTTACAAAAT 4925 || ||||| | || || || || || | |||||||| | |||||||| | | ||| Sbjct 16036141 ATGGCAATTCGGAAGCCATAGAAACAGCGGGCTTCTGTAATCTGAACTTCTTGGCTAAAC 16036082 Query 4926 CTTTCTACTAAGTTTTCGTTTACTATACCGTCACTGGCTGCAAAAAACGCCAAAACATGA 4985 | || || |||||||| |||||||| || ||||| | ||||| || |||| ||| || Sbjct 16036081 CGCTCCACCAAGTTTTCATTTACTATGCCATCACTCGGCGCAAAGAAAGCCAGAACGTGG 16036022 Query 4986 GATATAAAGTACTGTTCGTCAGGCTTAAGTTTTTTCCAGTGGGGCAAATCTTTAGTTAAA 5045 |||| |||||| || |||||||| || || | ||| | | || || | | | Sbjct 16036021 GATAGAAAGTATCTCTCCTCAGGCTTCAGGGATTCCTGGTGCTGAATGTCCTTGGAAAGA 16035962 Query 5046 TCAACTTCTTCAACAGTCCAAAACGACGCTTCCGCTTTTTTGTACATAGACCAAATATCA 5105 || || |||||| | |||||||| || || || ||||| | ||||| |||||||||| Sbjct 16035961 TCCACCTCTTCAGCTGTCCAAAAGGAAGCCTCAGCTTTCTCATACATCTGCCAAATATCA 16035902 Query 5106 GGATA-CTGAATCGGAAGTATGACAAA 5131 | || | || ||||| |||||||| Sbjct 16035901 TGGTACCCGACAGGGAAG-ATGACAAA 16035876 >seq7820 Length=31847680 Score = 183 bits (202), Expect = 3e-41 Identities = 571/873 (65%), Gaps = 21/873 (2%) Strand=Plus/Minus Query 4273 CTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAACGAAATATTTTCCATAAAATCAAACG 4332 ||| ||| || ||||| ||||| || ||||| | |||||||| ||| ||| ||||| | Sbjct 14843928 CTCTCTTCTCAAAGAAGTTAGTCTTCCCTTCCAGTGAAATATTCTCCCTAAGGTCAAATG 14843869 Query 4333 GATTAGTTGCGTTGTAATGTTTTTCACACTTTAGAGC-TAC--AAGCAATCGGTCAGCTA 4389 |||| | | || || || | | ||| | ||| ||| || ||| || | Sbjct 14843868 GATTTTCTACTCTGGAAACCTTGCTAAAACCTAGTTCCTACCTAAG---TCAGTCTGCCA 14843812 Query 4390 CAAATTCTATATACTGGCTCATGAGTTCGCAGTTAATTCCAATTAATCTCACAGGTAGCG 4449 ||||| |||||||| | | | |||||| || ||||| | || | || | | Sbjct 14843811 TGAATTCAATATACTGCTTTACTAACGTGCAGTTCATCCCAATGAGCTTCGCGGGCAAGG 14843752 Query 4450 CGTATGTCAAAAACTCTTGTTCTATAGTTACGGCTTCTGTGATTATATCTTTTATTTTAT 4509 | | || | ||||| || ||||| | ||||| | | ||||| || || | | | | Sbjct 14843751 CCTCTGGGAGGAACTCCTGGTCTATCCTAACGGCATTGATAATTATTTCCTTCACTCTCT 14843692 Query 4510 CTTTAGATGGTTTATTTACTAAGTATCCAAACAATAAACACGCAAAATCACAATGCAAAC 4569 | || ||||||| || | || | |||| | || ||||| | || |||| Sbjct 14843691 GCTCTGAAGGTTTATGGACCAGGTGTTTGAACATCAGGCAGGCAAAGTTGTGGTGTAAAC 14843632 Query 4570 CTTCGTCTCTGCTAATCAGTTCGTTAGAAAAC-GTTAATCCGGGCATTAAACCTCTCTTT 4628 | || ||||||||||| || || || |||||| | | || ||||| | | | || Sbjct 14843631 CCTCATCTCTGCTAATAAGCTCATTGGAAAACCGCGAGGCCAGGCATCAGGCTGCATTTC 14843572 Query 4629 TTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCCTTCTACGGCGGCAAAC 4688 || ||||| ||||| | ||| | || ||| ||||| | || ||||| ||| ||||| Sbjct 14843571 TTGAGCCAGAATATCGACGCAGAAGAACCAAAAAAGGAGATTCCTTCCGTGGCAGCAAAG 14843512 Query 4689 GCTACTAATCGGGACCCGAACG-AGCTGGCTTTGTCTTTAATCCATTTTAATGCCCAGTT 4747 | || | |||| | | ||| ||||||| || ||| || ||||||| Sbjct 14843511 TCCACATCCCATTCCCCGTAGGTAGCCT-CTTTGTCCCCAACCCAACGCAAGGCCCAGTC 14843453 Query 4748 AGCTTTTTTCTTAACGCACGGAATTGTGTATATAGCGTTAAATAATTTACTTTTTTCAAA 4807 || || ||| | | || || ||||| | || | ||| || | | || | || Sbjct 14843452 TGCCTTCTTCCTTCCACAAGGCATTGTCTCGATGGTGTTGAAGAGA--AATTCTGTCTCT 14843395 Query 4808 TGGG--TCTTGAATATAAGTGTCTATTAGTAGGCTATACATTTCAGAATGTATATTTTCT 4865 | || |||| |||||||||||| | || || ||| |||| |||||||| || ||||| Sbjct 14843394 TTGGAATCTTTAATATAAGTGTCAGTGAGGAGACTACACATCTCAGAATGGATGTTTTCC 14843335 Query 4866 ATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTCTGTTACTTGAACTTCGTTACAAAAT 4925 || ||||| || || || || || || | |||||||| | | |||||| | | | | Sbjct 14843334 ATGGCAATTTGGAAGCCATAGAAACAGCAGGCTTCTGTCATCTCAACTTCTTGGCCACAC 14843275 Query 4926 CTTTCTACTAAGTTTTCGTTTACTATACCGTCACTGGCTGCAAAAAACGCCA------AA 4979 | || || |||||||| |||||||| || |||| || ||||| || |||| | Sbjct 14843274 CGCTCCACCAAGTTTTCATTTACTATGCCAACACTCGCCGCAAAGAAAGCCAGAATGTGA 14843215 Query 4980 ACATGAGATATAAAGTACTGT-TCGTCAGGCTTAAGTTTTTTCCAGTGGGGCAAATCTTT 5038 || || | |||||| | || | || |||||||| || || |||||| | | || || Sbjct 14843214 ACGTGGGGTATAAAAT-CTCTCTCCTCAGGCTTCAGCGATTCCCAGTGTTGAATGTCCTT 14843156 Query 5039 AGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCTTCCGCTTTTTTGTACATAGACCA 5098 | | || || |||||| | |||||||| || || || ||||| || | || ||| Sbjct 14843155 GGAAAGATTCACCTCTTCAGCTGTCCAAAAGGAAGCCTCAGCTTTCTTACATATCTGCCA 14843096 Query 5099 AATATCAGGATACTGAATCGGAAGTATGACAAA 5131 || |||| | |||| || || | |||||||| Sbjct 14843095 AAGATCATGGTACTTCATAGGGAAGATGACAAA 14843063 >seq7842 Length=42459490 Score = 89.7 bits (98), Expect = 4e-13 Identities = 93/122 (76%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 4572 TCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGGGCATTAAACCTCTCTTTTTA 4631 || ||||||||||| ||||| || |||||||| | || ||||| | || | || || Sbjct 7548463 TCATCTCTGCTAATAAGTTCATTGGAAAACGTGAGGCCAGGCATCAGGCCGCGTTTCTTG 7548404 Query 4632 AGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCCTTCTACGGCGGCAAACGCT 4691 ||||| ||||| | ||||| || ||||||||||| || ||||| || || ||||| || Sbjct 7548403 AGCCAGAATATTGACGCAAAAGAACCAGAAAAGAAGATTCCTTCCACAGCAGCAAAAGCC 7548344 Query 4692 AC 4693 || Sbjct 7548343 AC 7548342 >seq7786 Length=83011774 Score = 89.7 bits (98), Expect = 4e-13 Identities = 98/130 (75%), Gaps = 3/130 (2%) Strand=Plus/Plus Query 4921 AAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTGGCTGCAAAAAACGCCAAAA 4980 |||||||| || || ||||| || || || || ||||||||||||||||| || || | Sbjct 48126727 AAAATCTT---ACCAAATTTTCATTCACAATTCCATCACTGGCTGCAAAAAAGGCTAATA 48126783 Query 4981 CATGAGATATAAAGTACTGTTCGTCAGGCTTAAGTTTTTTCCAGTGGGGCAAATCTTTAG 5040 ||||| ||||| |||| || || | ||||| || |||||||| || | ||| || | Sbjct 48126784 TGTGAGAGATAAAATACTTCTCATCCGATTTAAGCTTGTTCCAGTGAGGGAGATCCTTTG 48126843 Query 5041 TTAAATCAAC 5050 ||| ||||| Sbjct 48126844 ATAAGTCAAC 48126853 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427008628861376