Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Neomonachus_20schauinslandi_20[genbank_20GCA_5F002201575.1_202017-
06-20] 7,872 sequences; 2,400,917,536 total letters
Query= NC_030656.1
Length=133492
Score E
Sequences producing significant alignments: (Bits) Value
seq7767 268 8e-67
seq7820 183 3e-41
seq7842 89.7 4e-13
seq7786 89.7 4e-13
>seq7767
Length=50048226
Score = 268 bits (296), Expect = 8e-67
Identities = 584/867 (67%), Gaps = 17/867 (2%)
Strand=Plus/Minus
Query 4271 TACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAACGAAATATTTTCCATAAAATCAAA 4330
||||| ||| || ||||| || | ||||| | |||||||| ||||| || |||||
Sbjct 16036731 TACTCTCTTCTCAAAGAAGTT-----TCCCTTCCAGTGAAATATTCTCCATGAAGTCAAA 16036677
Query 4331 CGGATTAGTTGCGTTGTAATGTTTTTCACACTTTAGAGCTACAAGCAATCGGTCAGCTAC 4390
||||| | | || || || || | ||| | | | | ||||| || ||
Sbjct 16036676 TGGATTTTCTACTCTGAAAACCTTGCCAAAACCTAGCTCCAGCATAAGTCGGTGTGCCAC 16036617
Query 4391 AAATTCTATATACTGGCTCATGAGTTCGCAGTTAATTCCAATTAATCTCACAGGTAGCGC 4450
||| || ||| |||| |||| | ||| || || ||||| | ||| || | |
Sbjct 16036616 AAACTCAATACACTGCTTCATTAACGTGCAATTCATCCCAATGAGCTTCAGGGGCAAGGT 16036557
Query 4451 GTATGTCAAAAACTCTTGTTCTATAGTTACGGCTTCTGTGATTATATCTTTTATTTTATC 4510
| || | ||| | || ||||| ||||| | | ||||| || || | | | |
Sbjct 16036556 CTCCGTGAGGAACCCCTGCTCTATCCGAACGGCATTAATAATTATTTCCTTCACTCTCTG 16036497
Query 4511 TTTAGATGGTTTATTTACTAAGTATCCAAACAATAAACACGCAAAATCACAATGCAAACC 4570
|| || ||||| | || | || | |||| | || ||||| ||||| || |||||
Sbjct 16036496 CTTGGAAGGTTTGTGGACCAGGTGTTTGAACATCAGGCAGGCAAAGTCACAGTGTAAACC 16036437
Query 4571 TTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGGGCATTAAACCTCTCTTTTT 4630
|| ||||||||||| ||||| || |||||| | || ||||| | | | || ||
Sbjct 16036436 CTCATCTCTGCTAATAAGTTCATTGGAAAACATGGGGCCAGGCATCAGGTCACGTTTCTT 16036377
Query 4631 AAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCCTTCTACGGCGGCAAACGC 4690
||||| ||||| | ||||| || ||||||||||| || ||||| || || ||||| |
Sbjct 16036376 GAGCCAGAATATCGTCGCAAAAGAACCAGAAAAGAAGATTCCTTCCACAGCAGCAAAGTC 16036317
Query 4691 TACTAATCGGGACCCGAACG-AGCTGGCTTTGTCTTTAATCCATTTTAATGCCCAGTTAG 4749
|| | || |||| | | ||| ||||||| | |||| | || ||||||| |
Sbjct 16036316 CACAACCCGTTCCCCGTAGGTAGC-CTCTTTGTCCCCAGTCCAATGCAAGGCCCAGTCTG 16036258
Query 4750 CTTTTTTCTTAACGCACGGAATTGTGTATATAGCGTTAAA---TAATTTACTTTTTTCAA 4806
| || ||||| || || || ||||| | | ||||| || |||| |||| ||
Sbjct 16036257 CCTTCTTCTTTACACAAGGCATTGTCTCGAGGGCGTTGAAGAGAAATTCCCTTTCTT--- 16036201
Query 4807 ATGG-GTCTTGAATATAAGTGTCTATTAGTAGGCTATACATTTCAGAATGTATATTTTCT 4865
||| |||| || ||||||||| || || || || ||||| |||||||| || |||||
Sbjct 16036200 -TGGAATCTTTAACATAAGTGTCAATGAGGAGACTGTACATCTCAGAATGGATGTTTTCC 16036142
Query 4866 ATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTCTGTTACTTGAACTTCGTTACAAAAT 4925
|| ||||| | || || || || || | |||||||| | |||||||| | | |||
Sbjct 16036141 ATGGCAATTCGGAAGCCATAGAAACAGCGGGCTTCTGTAATCTGAACTTCTTGGCTAAAC 16036082
Query 4926 CTTTCTACTAAGTTTTCGTTTACTATACCGTCACTGGCTGCAAAAAACGCCAAAACATGA 4985
| || || |||||||| |||||||| || ||||| | ||||| || |||| ||| ||
Sbjct 16036081 CGCTCCACCAAGTTTTCATTTACTATGCCATCACTCGGCGCAAAGAAAGCCAGAACGTGG 16036022
Query 4986 GATATAAAGTACTGTTCGTCAGGCTTAAGTTTTTTCCAGTGGGGCAAATCTTTAGTTAAA 5045
|||| |||||| || |||||||| || || | ||| | | || || | | |
Sbjct 16036021 GATAGAAAGTATCTCTCCTCAGGCTTCAGGGATTCCTGGTGCTGAATGTCCTTGGAAAGA 16035962
Query 5046 TCAACTTCTTCAACAGTCCAAAACGACGCTTCCGCTTTTTTGTACATAGACCAAATATCA 5105
|| || |||||| | |||||||| || || || ||||| | ||||| ||||||||||
Sbjct 16035961 TCCACCTCTTCAGCTGTCCAAAAGGAAGCCTCAGCTTTCTCATACATCTGCCAAATATCA 16035902
Query 5106 GGATA-CTGAATCGGAAGTATGACAAA 5131
| || | || ||||| ||||||||
Sbjct 16035901 TGGTACCCGACAGGGAAG-ATGACAAA 16035876
>seq7820
Length=31847680
Score = 183 bits (202), Expect = 3e-41
Identities = 571/873 (65%), Gaps = 21/873 (2%)
Strand=Plus/Minus
Query 4273 CTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAACGAAATATTTTCCATAAAATCAAACG 4332
||| ||| || ||||| ||||| || ||||| | |||||||| ||| ||| ||||| |
Sbjct 14843928 CTCTCTTCTCAAAGAAGTTAGTCTTCCCTTCCAGTGAAATATTCTCCCTAAGGTCAAATG 14843869
Query 4333 GATTAGTTGCGTTGTAATGTTTTTCACACTTTAGAGC-TAC--AAGCAATCGGTCAGCTA 4389
|||| | | || || || | | ||| | ||| ||| || ||| || |
Sbjct 14843868 GATTTTCTACTCTGGAAACCTTGCTAAAACCTAGTTCCTACCTAAG---TCAGTCTGCCA 14843812
Query 4390 CAAATTCTATATACTGGCTCATGAGTTCGCAGTTAATTCCAATTAATCTCACAGGTAGCG 4449
||||| |||||||| | | | |||||| || ||||| | || | || | |
Sbjct 14843811 TGAATTCAATATACTGCTTTACTAACGTGCAGTTCATCCCAATGAGCTTCGCGGGCAAGG 14843752
Query 4450 CGTATGTCAAAAACTCTTGTTCTATAGTTACGGCTTCTGTGATTATATCTTTTATTTTAT 4509
| | || | ||||| || ||||| | ||||| | | ||||| || || | | | |
Sbjct 14843751 CCTCTGGGAGGAACTCCTGGTCTATCCTAACGGCATTGATAATTATTTCCTTCACTCTCT 14843692
Query 4510 CTTTAGATGGTTTATTTACTAAGTATCCAAACAATAAACACGCAAAATCACAATGCAAAC 4569
| || ||||||| || | || | |||| | || ||||| | || ||||
Sbjct 14843691 GCTCTGAAGGTTTATGGACCAGGTGTTTGAACATCAGGCAGGCAAAGTTGTGGTGTAAAC 14843632
Query 4570 CTTCGTCTCTGCTAATCAGTTCGTTAGAAAAC-GTTAATCCGGGCATTAAACCTCTCTTT 4628
| || ||||||||||| || || || |||||| | | || ||||| | | | ||
Sbjct 14843631 CCTCATCTCTGCTAATAAGCTCATTGGAAAACCGCGAGGCCAGGCATCAGGCTGCATTTC 14843572
Query 4629 TTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCCTTCTACGGCGGCAAAC 4688
|| ||||| ||||| | ||| | || ||| ||||| | || ||||| ||| |||||
Sbjct 14843571 TTGAGCCAGAATATCGACGCAGAAGAACCAAAAAAGGAGATTCCTTCCGTGGCAGCAAAG 14843512
Query 4689 GCTACTAATCGGGACCCGAACG-AGCTGGCTTTGTCTTTAATCCATTTTAATGCCCAGTT 4747
| || | |||| | | ||| ||||||| || ||| || |||||||
Sbjct 14843511 TCCACATCCCATTCCCCGTAGGTAGCCT-CTTTGTCCCCAACCCAACGCAAGGCCCAGTC 14843453
Query 4748 AGCTTTTTTCTTAACGCACGGAATTGTGTATATAGCGTTAAATAATTTACTTTTTTCAAA 4807
|| || ||| | | || || ||||| | || | ||| || | | || | ||
Sbjct 14843452 TGCCTTCTTCCTTCCACAAGGCATTGTCTCGATGGTGTTGAAGAGA--AATTCTGTCTCT 14843395
Query 4808 TGGG--TCTTGAATATAAGTGTCTATTAGTAGGCTATACATTTCAGAATGTATATTTTCT 4865
| || |||| |||||||||||| | || || ||| |||| |||||||| || |||||
Sbjct 14843394 TTGGAATCTTTAATATAAGTGTCAGTGAGGAGACTACACATCTCAGAATGGATGTTTTCC 14843335
Query 4866 ATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTCTGTTACTTGAACTTCGTTACAAAAT 4925
|| ||||| || || || || || || | |||||||| | | |||||| | | | |
Sbjct 14843334 ATGGCAATTTGGAAGCCATAGAAACAGCAGGCTTCTGTCATCTCAACTTCTTGGCCACAC 14843275
Query 4926 CTTTCTACTAAGTTTTCGTTTACTATACCGTCACTGGCTGCAAAAAACGCCA------AA 4979
| || || |||||||| |||||||| || |||| || ||||| || |||| |
Sbjct 14843274 CGCTCCACCAAGTTTTCATTTACTATGCCAACACTCGCCGCAAAGAAAGCCAGAATGTGA 14843215
Query 4980 ACATGAGATATAAAGTACTGT-TCGTCAGGCTTAAGTTTTTTCCAGTGGGGCAAATCTTT 5038
|| || | |||||| | || | || |||||||| || || |||||| | | || ||
Sbjct 14843214 ACGTGGGGTATAAAAT-CTCTCTCCTCAGGCTTCAGCGATTCCCAGTGTTGAATGTCCTT 14843156
Query 5039 AGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCTTCCGCTTTTTTGTACATAGACCA 5098
| | || || |||||| | |||||||| || || || ||||| || | || |||
Sbjct 14843155 GGAAAGATTCACCTCTTCAGCTGTCCAAAAGGAAGCCTCAGCTTTCTTACATATCTGCCA 14843096
Query 5099 AATATCAGGATACTGAATCGGAAGTATGACAAA 5131
|| |||| | |||| || || | ||||||||
Sbjct 14843095 AAGATCATGGTACTTCATAGGGAAGATGACAAA 14843063
>seq7842
Length=42459490
Score = 89.7 bits (98), Expect = 4e-13
Identities = 93/122 (76%), Gaps = 0/122 (0%)
Strand=Plus/Minus
Query 4572 TCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGGGCATTAAACCTCTCTTTTTA 4631
|| ||||||||||| ||||| || |||||||| | || ||||| | || | || ||
Sbjct 7548463 TCATCTCTGCTAATAAGTTCATTGGAAAACGTGAGGCCAGGCATCAGGCCGCGTTTCTTG 7548404
Query 4632 AGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCCTTCTACGGCGGCAAACGCT 4691
||||| ||||| | ||||| || ||||||||||| || ||||| || || ||||| ||
Sbjct 7548403 AGCCAGAATATTGACGCAAAAGAACCAGAAAAGAAGATTCCTTCCACAGCAGCAAAAGCC 7548344
Query 4692 AC 4693
||
Sbjct 7548343 AC 7548342
>seq7786
Length=83011774
Score = 89.7 bits (98), Expect = 4e-13
Identities = 98/130 (75%), Gaps = 3/130 (2%)
Strand=Plus/Plus
Query 4921 AAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTGGCTGCAAAAAACGCCAAAA 4980
|||||||| || || ||||| || || || || ||||||||||||||||| || || |
Sbjct 48126727 AAAATCTT---ACCAAATTTTCATTCACAATTCCATCACTGGCTGCAAAAAAGGCTAATA 48126783
Query 4981 CATGAGATATAAAGTACTGTTCGTCAGGCTTAAGTTTTTTCCAGTGGGGCAAATCTTTAG 5040
||||| ||||| |||| || || | ||||| || |||||||| || | ||| || |
Sbjct 48126784 TGTGAGAGATAAAATACTTCTCATCCGATTTAAGCTTGTTCCAGTGAGGGAGATCCTTTG 48126843
Query 5041 TTAAATCAAC 5050
||| |||||
Sbjct 48126844 ATAAGTCAAC 48126853
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 427008628861376
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |