Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neomonachus_20schauinslandi_20[genbank_20GCA_5F002201575.1_202017- 06-20] 7,872 sequences; 2,400,917,536 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq7767 340 2e-88 seq7820 269 4e-67 seq7870 123 3e-23 seq7842 116 5e-21 seq7786 93.3 6e-14 >seq7767 Length=50048226 Score = 340 bits (376), Expect = 2e-88 Identities = 641/937 (68%), Gaps = 12/937 (1%) Strand=Plus/Minus Query 47791 TTCT-TTAAAAGTCAACATCTAAAGAAAAATGATTATCTTCT-TGAGACATAACTCCCAT 47848 |||| ||| |||||| |||| || | |||| ||| | || | ||||| |||||||| Sbjct 16036806 TTCTCTTAGAAGTCAGCATCCAAGGTAAAAGAATTCTGTTGGATTTGACATCACTCCCAT 16036747 Query 47849 TTTTTGATATTCACCCACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATT 47908 | ||||| ||||| || | ||||| || || || | ||||||| ||| ||||| Sbjct 16036746 CCTCTGATACTCACCTACTCTCTTCTCAAAGAAGTT-----TCCCTTCCAGTGAAATATT 16036692 Query 47909 TTCCATAAAATCAAATGGATTAACTGCATTATAAAtttttttAAATCCTAATTCTGAAAT 47968 ||||| || ||||||||||| || | | ||| || ||| |||| || || Sbjct 16036691 CTCCATGAAGTCAAATGGATTTTCTACTCTGAAAACCTTGCCAAAACCTAGCTCCAGCAT 16036632 Query 47969 CAGTCTATCTGCAACGAATTCTATATATCTTTTCATCATTTCACAATTCATTCCTATAAG 48028 |||| | ||| || || || ||| | ||||| | |||||||| || || || Sbjct 16036631 AAGTCGGTGTGCCACAAACTCAATACACTGCTTCATTAACGTGCAATTCATCCCAATGAG 16036572 Query 48029 TTTAACTGGTAGAGCCTCCGTAAGAAACTCTTGTTCGATAGTGACAGCATCCACTATTAT 48088 || | || | | |||||| || ||| | || || || || |||| | ||||| Sbjct 16036571 CTTCAGGGGCAAGGTCTCCGTGAGGAACCCCTGCTCTATCCGAACGGCATTAATAATTAT 16036512 Query 48089 CGATGTTACCGTTTCCTCACTTGGTGGATACAACAAATGTTTAAACATTAAACATGCAAA 48148 | || | | || ||| | | || ||||| ||||| | || ||||| Sbjct 16036511 TTCCTTCACTCTCTGCTTGGAAGGTTTGTGGACCAGGTGTTTGAACATCAGGCAGGCAAA 16036452 Query 48149 ATCACAATGAAGACCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGACCGGGCAT 48208 ||||| || | ||| |||||||| ||||| | ||| || ||||| || | || ||||| Sbjct 16036451 GTCACAGTGTAAACCCTCATCTCTGCTAATAAGTTCATTGGAAAACATGGGGCCAGGCAT 16036392 Query 48209 TAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAATATGCCTTC 48268 || ||||||| |||||||| ||||| | ||| ||||| ||||||||||| || ||||| Sbjct 16036391 CAGGTCACGTTTCTTGAGCCAGAATATCGTCGCAAAAGAACCAGAAAAGAAGATTCCTTC 16036332 Query 48269 TACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAACTGGCTTCGTTGTGTA---TCCACCG 48325 || || ||||| | || | || ||||| | || || |||| |||| | Sbjct 16036331 CACAGCAGCAAAGTCCACAACCCGTTCCCCGTAGGTAGCCTCTTTGTCCCCAGTCCAATG 16036272 Query 48326 TTGTGCCCAATCAGCCTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGAAA 48385 ||||| || |||||||||||||||||||||||||| || | || || |||||||| Sbjct 16036271 CAAGGCCCAGTCTGCCTTCTTCTTTACACAAGGCATTGTCTCGAGGGCGTTGAAGAGAAA 16036212 Query 48386 GtttttttCATTGCTATCTTTAACGTAAGTATCTATTAAAAGACTATACATTTCGGAGTG 48445 | |||| ||| ||||||||| ||||| || || | ||||| ||||| || || || Sbjct 16036211 TTCCCTTTCTTTGGAATCTTTAACATAAGTGTCAATGAGGAGACTGTACATCTCAGAATG 16036152 Query 48446 AATATTTTCAATTGCCATCTGAAATCCGTAAAAACATCTCGCTTCTGTGATCTGTACCTC 48505 || ||||| || || || | || || || ||||| | |||||||| ||||| || || Sbjct 16036151 GATGTTTTCCATGGCAATTCGGAAGCCATAGAAACAGCGGGCTTCTGTAATCTGAACTTC 16036092 Query 48506 CGTACAAAATCGTTCAGCCAAATTCTCATTTACTATTCCATCACTAGCAGCAAAAAATGC 48565 | ||| || || |||| || ||||||||||| |||||||| | ||||| || || Sbjct 16036091 TTGGCTAAACCGCTCCACCAAGTTTTCATTTACTATGCCATCACTCGGCGCAAAGAAAGC 16036032 Query 48566 TAATACATGTTTAATAAAATATTTTTCGTTGGAAGTCAGTTTATTCC-AGTCATTGATAT 48624 | || || | ||| ||| | || | | |||| ||||| || | || | Sbjct 16036031 CAGAACGTGGGATAGAAAGTATCTCTCCTCAGGCTTCAG-GGATTCCTGGTGCTGAATGT 16035973 Query 48625 CTTTTGATATATCTACTTCTTCAGCTGTCCAAAATGATGCCTCTGCTTTTTTATACATAT 48684 | || || | ||| || ||||||||||||||||| || ||||| ||||| | |||||| | Sbjct 16035972 CCTTGGAAAGATCCACCTCTTCAGCTGTCCAAAAGGAAGCCTCAGCTTTCTCATACATCT 16035913 Query 48685 TCCATATATCACTGTATTGGATTGGGAAAATAACAAA 48721 ||| |||||| ||| || ||||| || ||||| Sbjct 16035912 GCCAAATATCATGGTACCCGACAGGGAAGATGACAAA 16035876 >seq7820 Length=31847680 Score = 269 bits (298), Expect = 4e-67 Identities = 602/898 (67%), Gaps = 12/898 (1%) Strand=Plus/Minus Query 47835 GACATAACTCCCATTTTTTGATATTCACCCACACGTTTCTCGAAAAAATTAGTTTTGCCT 47894 ||||| ||||| || | ||||| | || | | ||||| || || ||||| || ||| Sbjct 14843959 GACATCACTCCTATCCTCTGATACTGGCCTCCTCTCTTCTCAAAGAAGTTAGTCTTCCCT 14843900 Query 47895 TCCAATGATATATTTTCCATAAAATCAAATGGATTAACTGCATTATAAAtttttttAAAT 47954 |||| ||| ||||| ||| ||| ||||||||||| || | | ||| || |||| Sbjct 14843899 TCCAGTGAAATATTCTCCCTAAGGTCAAATGGATTTTCTACTCTGGAAACCTTGCTAAAA 14843840 Query 47955 CCTAATTCTGAAATCAGTCTATCTGCAACGAATTCTATATA-TCTTTTCATCATTTCACA 48013 |||| ||| | | |||| ||||| | |||||| ||||| | ||| | | | || Sbjct 14843839 CCTAGTTCCTACCTAAGTCAGTCTGCCATGAATTCAATATACTGCTTTACTAACGTG-CA 14843781 Query 48014 ATTCATTCCTATAAGTTTAACTGGTAGAGCCTCCGTAAGAAACTCTTGTTCGATAGTGAC 48073 ||||| || || || || | || | ||||| | || ||||| || || || | || Sbjct 14843780 GTTCATCCCAATGAGCTTCGCGGGCAAGGCCTCTGGGAGGAACTCCTGGTCTATCCTAAC 14843721 Query 48074 AGCATCCACTATTATCGATGTTACCGTTTCCTCACTTGGTGGATACAACAAATGTTTAAA 48133 |||| | ||||| | || | | ||| ||| || | || ||||| || Sbjct 14843720 GGCATTGATAATTATTTCCTTCACTCTCTGCTCTGAAGGTTTATGGACCAGGTGTTTGAA 14843661 Query 48134 CATTAAACATGCAAAATCACAATGAAGACCTTCATCTCTACTAATTAATTCGTTAGAAAA 48193 ||| | || ||||| | || | ||| |||||||| ||||| | || || ||||| Sbjct 14843660 CATCAGGCAGGCAAAGTTGTGGTGTAAACCCTCATCTCTGCTAATAAGCTCATTGGAAAA 14843601 Query 48194 T-GTGAGACCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGATCCAG 48252 | ||| || ||||| || | | ||| |||||||| ||||| | ||| |||| ||| Sbjct 14843600 CCGCGAGGCCAGGCATCAGGCTGCATTTCTTGAGCCAGAATATCGACGCAGAAGAACCAA 14843541 Query 48253 AAAAGAATATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAACTGGCTTCGT 48312 ||||| | || ||||| ||| ||||| | | | || ||||| | || || | Sbjct 14843540 AAAAGGAGATTCCTTCCGTGGCAGCAAAGTCCACATCCCATTCCCCGTAGGTAGCCTCTT 14843481 Query 48313 TGTGT---ATCCACCGTTGTGCCCAATCAGCCTTCTTCTTTACACAAGGCATTGTTTCTA 48369 ||| | ||| || ||||| || ||||||||| || ||||||||||||| || | Sbjct 14843480 TGTCCCCAACCCAACGCAAGGCCCAGTCTGCCTTCTTCCTTCCACAAGGCATTGTCTCGA 14843421 Query 48370 TAGCATTAAAGAGAAAGtttttttCATTGCTATCTTTAACGTAAGTATCTATTAAAAGAC 48429 | | || |||||||| | | | || ||| |||||||| ||||| || | | |||| Sbjct 14843420 TGGTGTTGAAGAGAAATTCTGTCTCTTTGGAATCTTTAATATAAGTGTCAGTGAGGAGAC 14843361 Query 48430 TATACATTTCGGAGTGAATATTTTCAATTGCCATCTGAAATCCGTAAAAACATCTCGCTT 48489 || |||| || || || || ||||| || || || || || || || ||||| | |||| Sbjct 14843360 TACACATCTCAGAATGGATGTTTTCCATGGCAATTTGGAAGCCATAGAAACAGCAGGCTT 14843301 Query 48490 CTGTGATCTGTACCTCCGTACAAAATCGTTCAGCCAAATTCTCATTTACTATTCCATCAC 48549 |||| |||| || || | | | || || |||| || ||||||||||| ||| ||| Sbjct 14843300 CTGTCATCTCAACTTCTTGGCCACACCGCTCCACCAAGTTTTCATTTACTATGCCAACAC 14843241 Query 48550 TAGCAGCAAAAAATGC--TAAT----ACATGTTTAATAAAATATTTTTCGTTGGAAGTCA 48603 | || ||||| || || ||| || || ||||||| | | || | | ||| Sbjct 14843240 TCGCCGCAAAGAAAGCCAGAATGTGAACGTGGGGTATAAAATCTCTCTCCTCAGGCTTCA 14843181 Query 48604 GTTTATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAATGATG 48663 | | ||||| | || || || || | || || ||||||||||||||||| || | Sbjct 14843180 GCGATTCCCAGTGTTGAATGTCCTTGGAAAGATTCACCTCTTCAGCTGTCCAAAAGGAAG 14843121 Query 48664 CCTCTGCTTTTTTATACATATTCCATATATCACTGTATTGGATTGGGAAAATAACAAA 48721 |||| ||||| ||| | || | ||| | |||| ||| | || ||||| || ||||| Sbjct 14843120 CCTCAGCTTTCTTACATATCTGCCAAAGATCATGGTACTTCATAGGGAAGATGACAAA 14843063 >seq7870 Length=10551609 Score = 123 bits (136), Expect = 3e-23 Identities = 107/133 (80%), Gaps = 0/133 (0%) Strand=Plus/Minus Query 77127 TGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGAT 77186 ||||||||||| ||||| ||||| ||||| || || || |||||||| ||||| | || Sbjct 10335165 TGAAATTCTCCTGACAAGACTCTGCGAGTATAGATGTTGCTGGTATAAGGTTCAATGGAC 10335106 Query 77187 TCATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAATAAACTA 77246 ||||| ||||||| ||| |||||||| |||||||| ||||| || || | | |||||| Sbjct 10335105 TCATTATTTCCCAGAATCTGAGCAGTTGAAGCAGTAGGCATCGGGGCAATAAGTAAACTG 10335046 Query 77247 TTTCTGAGACCAT 77259 ||||| | ||||| Sbjct 10335045 TTTCTTATACCAT 10335033 Score = 123 bits (136), Expect = 3e-23 Identities = 130/171 (76%), Gaps = 0/171 (0%) Strand=Plus/Minus Query 76849 TCCATCCGTAGAAATGCATGCTTGTCAGTTTGGAATAACTAGGATCGGCTATATGAATAT 76908 |||| |||||||||||||| || || |||||| ||| |||| || || || || || | Sbjct 10337845 TCCAGCCGTAGAAATGCATACTGGTGAGTTTGCCATAGTTAGGCTCAGCAATGTGGATGT 10337786 Query 76909 TCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATAATGGTCT 76968 ||| || || |||||||| |||||||| ||||| ||||| ||||| || | || ||| | Sbjct 10337785 TCAAAGATTGGCTTTGATCAATGAAAGCACCTCTTTCAGCTGCCATCTTAAGAACGGTTT 10337726 Query 76969 TTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCATCTGGAA 77019 | || | ||||||||| | ||| || ||| ||| || | ||||| |||| Sbjct 10337725 TCTGTGAAATTTCCCACACAGTCTTATAAAGTTGCTTCAGGTCATCAGGAA 10337675 Score = 102 bits (112), Expect = 1e-16 Identities = 112/149 (75%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 78003 ACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGT 78062 ||||||||||| |||||||| || ||||| || |||| || || || | || | ||| Sbjct 10325155 ACTCGTTTCATGAAGAGATCTGGAATCCAAAGGGCAAAGAAAAGGTCCCTGGCACGCTGT 10325096 Query 78063 TCTTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGT 78122 ||||| |||||||| ||||| || | ||| |||||||| | ||| || ||||||| || Sbjct 10325095 TCTTCCTTTCCTGTGTTCTTCTTTAAATCCAGAAACTCAAAAATGTCTAAATGCCAAGGC 10325036 Query 78123 TCTAGATATATTGCCATAACTCCAGGTCG 78151 || || || || || | | |||||||| Sbjct 10325035 TCCAGGTAAATAGCAAATGCCCCAGGTCG 10325007 Score = 98.7 bits (108), Expect = 1e-15 Identities = 104/137 (76%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 78399 GTTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAACCATTTTTCAGAAAGTAGATTG 78458 || || ||||| || | || ||||| ||||| |||||||| || |||||||| || ||| Sbjct 10316807 GTACCAGCATTGAAGAGAGTGGGAGAGGCATGGGTAAACCACTTCTCAGAAAGAAGGTTG 10316748 Query 78459 TATGTTTCAATAGCTGATTCTATGTCCCATTGATGAATTCCTACCGCTACACGCATCAAC 78518 |||||||||||||| | || || || | ||||| || || | || | ||||||| Sbjct 10316747 TATGTTTCAATAGCAGCATCAATATCTTCTGCGTGAATCCCCACAGACACCCTCATCAAC 10316688 Query 78519 ATATGCTGAGGTCTTTC 78535 ||||| || |||||||| Sbjct 10316687 ATATGTTGTGGTCTTTC 10316671 Score = 86.0 bits (94), Expect = 9e-12 Identities = 64/75 (85%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 77915 ATATAGCCGTTCAAATTCATCTCCCCAAACATCATCCAATCCAGGGCATTCATTTGGGCA 77974 ||||||| |||||||| ||||||||||| ||||||| ||||| ||||||||||| || Sbjct 10325829 ATATAGCTTCTCAAATTCCTCTCCCCAAACCTCATCCAGACCAGGACATTCATTTGGACA 10325770 Query 77975 CATCAATGACCAGTC 77989 || ||| |||||||| Sbjct 10325769 CAACAAAGACCAGTC 10325755 >seq7842 Length=42459490 Score = 116 bits (128), Expect = 5e-21 Identities = 97/119 (82%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 48165 TCATCTCTACTAATTAATTCGTTAGAAAATGTGAGACCGGGCATTAGTCCACGTTTTTTG 48224 |||||||| ||||| | ||| || ||||| ||||| || ||||| || || ||||| ||| Sbjct 7548463 TCATCTCTGCTAATAAGTTCATTGGAAAACGTGAGGCCAGGCATCAGGCCGCGTTTCTTG 7548404 Query 48225 AGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACGGCCGCAAATGC 48283 ||||| ||||||| ||| ||||| ||||||||||| || ||||| || || ||||| || Sbjct 7548403 AGCCAGAATATTGACGCAAAAGAACCAGAAAAGAAGATTCCTTCCACAGCAGCAAAAGC 7548345 Score = 100 bits (110), Expect = 4e-16 Identities = 109/143 (76%), Gaps = 4/143 (3%) Strand=Plus/Minus Query 47791 TTCT-TTAAAAGTCAACATCTAAAGAAAAATGATTATCTTCTTGA---GACATAACTCCC 47846 |||| ||| |||||| |||| || | |||| ||| ||| | || ||||| |||||| Sbjct 7549972 TTCTCTTAGAAGTCAGCATCCAAGGTAAAAGAATTCTCTGTTGGACTTGACATCACTCCC 7549913 Query 47847 ATTTTTTGATATTCACCCACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATA 47906 || | ||||| || || || | ||||| || || ||||| || ||||||| ||| ||| Sbjct 7549912 ATCCTCTGATACTCGCCTACTCTCTTCTCAAAGAAGTTAGTCTTCCCTTCCAGTGAAATA 7549853 Query 47907 TTTTCCATAAAATCAAATGGATT 47929 || |||||||| ||||||||||| Sbjct 7549852 TTCTCCATAAAGTCAAATGGATT 7549830 Score = 89.7 bits (98), Expect = 7e-13 Identities = 70/84 (83%), Gaps = 0/84 (0%) Strand=Plus/Minus Query 48638 TACTTCTTCAGCTGTCCAAAATGATGCCTCTGCTTTTTTATACATATTCCATATATCACT 48697 ||| ||||||||||||||||| || ||||| ||||| |||||||| | ||| |||||| Sbjct 7545341 TACCTCTTCAGCTGTCCAAAAGGAAGCCTCAGCTTTCTTATACATCTGCCAAATATCATG 7545282 Query 48698 GTATTGGATTGGGAAAATAACAAA 48721 ||||| ||| ||||| || ||||| Sbjct 7545281 GTATTCGATAGGGAAGATGACAAA 7545258 >seq7786 Length=83011774 Score = 93.3 bits (102), Expect = 6e-14 Identities = 72/86 (84%), Gaps = 0/86 (0%) Strand=Plus/Plus Query 48638 TACTTCTTCAGCTGTCCAAAATGATGCCTCTGCTTTTTTATACATATTCCATATATCACT 48697 ||| ||||| || ||||| || ||||||| ||| | ||||||||| ||||| |||||| Sbjct 48132203 TACCTCTTCGGCCGTCCAGAAGGATGCCTGTGCCTGTTTATACATTTTCCAAATATCAGG 48132262 Query 48698 GTATTGGATTGGGAAAATAACAAATC 48723 ||||||||||||||| || ||||||| Sbjct 48132263 GTATTGGATTGGGAAGATGACAAATC 48132288 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694600444590080