Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Neomonachus_20schauinslandi_20[genbank_20GCA_5F002201575.1_202017-
06-20] 7,872 sequences; 2,400,917,536 total letters
Query= NC_031033.1
Length=217124
Score E
Sequences producing significant alignments: (Bits) Value
seq7767 340 2e-88
seq7820 269 4e-67
seq7870 123 3e-23
seq7842 116 5e-21
seq7786 93.3 6e-14
>seq7767
Length=50048226
Score = 340 bits (376), Expect = 2e-88
Identities = 641/937 (68%), Gaps = 12/937 (1%)
Strand=Plus/Minus
Query 47791 TTCT-TTAAAAGTCAACATCTAAAGAAAAATGATTATCTTCT-TGAGACATAACTCCCAT 47848
|||| ||| |||||| |||| || | |||| ||| | || | ||||| ||||||||
Sbjct 16036806 TTCTCTTAGAAGTCAGCATCCAAGGTAAAAGAATTCTGTTGGATTTGACATCACTCCCAT 16036747
Query 47849 TTTTTGATATTCACCCACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATT 47908
| ||||| ||||| || | ||||| || || || | ||||||| ||| |||||
Sbjct 16036746 CCTCTGATACTCACCTACTCTCTTCTCAAAGAAGTT-----TCCCTTCCAGTGAAATATT 16036692
Query 47909 TTCCATAAAATCAAATGGATTAACTGCATTATAAAtttttttAAATCCTAATTCTGAAAT 47968
||||| || ||||||||||| || | | ||| || ||| |||| || ||
Sbjct 16036691 CTCCATGAAGTCAAATGGATTTTCTACTCTGAAAACCTTGCCAAAACCTAGCTCCAGCAT 16036632
Query 47969 CAGTCTATCTGCAACGAATTCTATATATCTTTTCATCATTTCACAATTCATTCCTATAAG 48028
|||| | ||| || || || ||| | ||||| | |||||||| || || ||
Sbjct 16036631 AAGTCGGTGTGCCACAAACTCAATACACTGCTTCATTAACGTGCAATTCATCCCAATGAG 16036572
Query 48029 TTTAACTGGTAGAGCCTCCGTAAGAAACTCTTGTTCGATAGTGACAGCATCCACTATTAT 48088
|| | || | | |||||| || ||| | || || || || |||| | |||||
Sbjct 16036571 CTTCAGGGGCAAGGTCTCCGTGAGGAACCCCTGCTCTATCCGAACGGCATTAATAATTAT 16036512
Query 48089 CGATGTTACCGTTTCCTCACTTGGTGGATACAACAAATGTTTAAACATTAAACATGCAAA 48148
| || | | || ||| | | || ||||| ||||| | || |||||
Sbjct 16036511 TTCCTTCACTCTCTGCTTGGAAGGTTTGTGGACCAGGTGTTTGAACATCAGGCAGGCAAA 16036452
Query 48149 ATCACAATGAAGACCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGACCGGGCAT 48208
||||| || | ||| |||||||| ||||| | ||| || ||||| || | || |||||
Sbjct 16036451 GTCACAGTGTAAACCCTCATCTCTGCTAATAAGTTCATTGGAAAACATGGGGCCAGGCAT 16036392
Query 48209 TAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAATATGCCTTC 48268
|| ||||||| |||||||| ||||| | ||| ||||| ||||||||||| || |||||
Sbjct 16036391 CAGGTCACGTTTCTTGAGCCAGAATATCGTCGCAAAAGAACCAGAAAAGAAGATTCCTTC 16036332
Query 48269 TACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAACTGGCTTCGTTGTGTA---TCCACCG 48325
|| || ||||| | || | || ||||| | || || |||| |||| |
Sbjct 16036331 CACAGCAGCAAAGTCCACAACCCGTTCCCCGTAGGTAGCCTCTTTGTCCCCAGTCCAATG 16036272
Query 48326 TTGTGCCCAATCAGCCTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGAAA 48385
||||| || |||||||||||||||||||||||||| || | || || ||||||||
Sbjct 16036271 CAAGGCCCAGTCTGCCTTCTTCTTTACACAAGGCATTGTCTCGAGGGCGTTGAAGAGAAA 16036212
Query 48386 GtttttttCATTGCTATCTTTAACGTAAGTATCTATTAAAAGACTATACATTTCGGAGTG 48445
| |||| ||| ||||||||| ||||| || || | ||||| ||||| || || ||
Sbjct 16036211 TTCCCTTTCTTTGGAATCTTTAACATAAGTGTCAATGAGGAGACTGTACATCTCAGAATG 16036152
Query 48446 AATATTTTCAATTGCCATCTGAAATCCGTAAAAACATCTCGCTTCTGTGATCTGTACCTC 48505
|| ||||| || || || | || || || ||||| | |||||||| ||||| || ||
Sbjct 16036151 GATGTTTTCCATGGCAATTCGGAAGCCATAGAAACAGCGGGCTTCTGTAATCTGAACTTC 16036092
Query 48506 CGTACAAAATCGTTCAGCCAAATTCTCATTTACTATTCCATCACTAGCAGCAAAAAATGC 48565
| ||| || || |||| || ||||||||||| |||||||| | ||||| || ||
Sbjct 16036091 TTGGCTAAACCGCTCCACCAAGTTTTCATTTACTATGCCATCACTCGGCGCAAAGAAAGC 16036032
Query 48566 TAATACATGTTTAATAAAATATTTTTCGTTGGAAGTCAGTTTATTCC-AGTCATTGATAT 48624
| || || | ||| ||| | || | | |||| ||||| || | || |
Sbjct 16036031 CAGAACGTGGGATAGAAAGTATCTCTCCTCAGGCTTCAG-GGATTCCTGGTGCTGAATGT 16035973
Query 48625 CTTTTGATATATCTACTTCTTCAGCTGTCCAAAATGATGCCTCTGCTTTTTTATACATAT 48684
| || || | ||| || ||||||||||||||||| || ||||| ||||| | |||||| |
Sbjct 16035972 CCTTGGAAAGATCCACCTCTTCAGCTGTCCAAAAGGAAGCCTCAGCTTTCTCATACATCT 16035913
Query 48685 TCCATATATCACTGTATTGGATTGGGAAAATAACAAA 48721
||| |||||| ||| || ||||| || |||||
Sbjct 16035912 GCCAAATATCATGGTACCCGACAGGGAAGATGACAAA 16035876
>seq7820
Length=31847680
Score = 269 bits (298), Expect = 4e-67
Identities = 602/898 (67%), Gaps = 12/898 (1%)
Strand=Plus/Minus
Query 47835 GACATAACTCCCATTTTTTGATATTCACCCACACGTTTCTCGAAAAAATTAGTTTTGCCT 47894
||||| ||||| || | ||||| | || | | ||||| || || ||||| || |||
Sbjct 14843959 GACATCACTCCTATCCTCTGATACTGGCCTCCTCTCTTCTCAAAGAAGTTAGTCTTCCCT 14843900
Query 47895 TCCAATGATATATTTTCCATAAAATCAAATGGATTAACTGCATTATAAAtttttttAAAT 47954
|||| ||| ||||| ||| ||| ||||||||||| || | | ||| || ||||
Sbjct 14843899 TCCAGTGAAATATTCTCCCTAAGGTCAAATGGATTTTCTACTCTGGAAACCTTGCTAAAA 14843840
Query 47955 CCTAATTCTGAAATCAGTCTATCTGCAACGAATTCTATATA-TCTTTTCATCATTTCACA 48013
|||| ||| | | |||| ||||| | |||||| ||||| | ||| | | | ||
Sbjct 14843839 CCTAGTTCCTACCTAAGTCAGTCTGCCATGAATTCAATATACTGCTTTACTAACGTG-CA 14843781
Query 48014 ATTCATTCCTATAAGTTTAACTGGTAGAGCCTCCGTAAGAAACTCTTGTTCGATAGTGAC 48073
||||| || || || || | || | ||||| | || ||||| || || || | ||
Sbjct 14843780 GTTCATCCCAATGAGCTTCGCGGGCAAGGCCTCTGGGAGGAACTCCTGGTCTATCCTAAC 14843721
Query 48074 AGCATCCACTATTATCGATGTTACCGTTTCCTCACTTGGTGGATACAACAAATGTTTAAA 48133
|||| | ||||| | || | | ||| ||| || | || ||||| ||
Sbjct 14843720 GGCATTGATAATTATTTCCTTCACTCTCTGCTCTGAAGGTTTATGGACCAGGTGTTTGAA 14843661
Query 48134 CATTAAACATGCAAAATCACAATGAAGACCTTCATCTCTACTAATTAATTCGTTAGAAAA 48193
||| | || ||||| | || | ||| |||||||| ||||| | || || |||||
Sbjct 14843660 CATCAGGCAGGCAAAGTTGTGGTGTAAACCCTCATCTCTGCTAATAAGCTCATTGGAAAA 14843601
Query 48194 T-GTGAGACCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGATCCAG 48252
| ||| || ||||| || | | ||| |||||||| ||||| | ||| |||| |||
Sbjct 14843600 CCGCGAGGCCAGGCATCAGGCTGCATTTCTTGAGCCAGAATATCGACGCAGAAGAACCAA 14843541
Query 48253 AAAAGAATATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAACTGGCTTCGT 48312
||||| | || ||||| ||| ||||| | | | || ||||| | || || |
Sbjct 14843540 AAAAGGAGATTCCTTCCGTGGCAGCAAAGTCCACATCCCATTCCCCGTAGGTAGCCTCTT 14843481
Query 48313 TGTGT---ATCCACCGTTGTGCCCAATCAGCCTTCTTCTTTACACAAGGCATTGTTTCTA 48369
||| | ||| || ||||| || ||||||||| || ||||||||||||| || |
Sbjct 14843480 TGTCCCCAACCCAACGCAAGGCCCAGTCTGCCTTCTTCCTTCCACAAGGCATTGTCTCGA 14843421
Query 48370 TAGCATTAAAGAGAAAGtttttttCATTGCTATCTTTAACGTAAGTATCTATTAAAAGAC 48429
| | || |||||||| | | | || ||| |||||||| ||||| || | | ||||
Sbjct 14843420 TGGTGTTGAAGAGAAATTCTGTCTCTTTGGAATCTTTAATATAAGTGTCAGTGAGGAGAC 14843361
Query 48430 TATACATTTCGGAGTGAATATTTTCAATTGCCATCTGAAATCCGTAAAAACATCTCGCTT 48489
|| |||| || || || || ||||| || || || || || || || ||||| | ||||
Sbjct 14843360 TACACATCTCAGAATGGATGTTTTCCATGGCAATTTGGAAGCCATAGAAACAGCAGGCTT 14843301
Query 48490 CTGTGATCTGTACCTCCGTACAAAATCGTTCAGCCAAATTCTCATTTACTATTCCATCAC 48549
|||| |||| || || | | | || || |||| || ||||||||||| ||| |||
Sbjct 14843300 CTGTCATCTCAACTTCTTGGCCACACCGCTCCACCAAGTTTTCATTTACTATGCCAACAC 14843241
Query 48550 TAGCAGCAAAAAATGC--TAAT----ACATGTTTAATAAAATATTTTTCGTTGGAAGTCA 48603
| || ||||| || || ||| || || ||||||| | | || | | |||
Sbjct 14843240 TCGCCGCAAAGAAAGCCAGAATGTGAACGTGGGGTATAAAATCTCTCTCCTCAGGCTTCA 14843181
Query 48604 GTTTATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAATGATG 48663
| | ||||| | || || || || | || || ||||||||||||||||| || |
Sbjct 14843180 GCGATTCCCAGTGTTGAATGTCCTTGGAAAGATTCACCTCTTCAGCTGTCCAAAAGGAAG 14843121
Query 48664 CCTCTGCTTTTTTATACATATTCCATATATCACTGTATTGGATTGGGAAAATAACAAA 48721
|||| ||||| ||| | || | ||| | |||| ||| | || ||||| || |||||
Sbjct 14843120 CCTCAGCTTTCTTACATATCTGCCAAAGATCATGGTACTTCATAGGGAAGATGACAAA 14843063
>seq7870
Length=10551609
Score = 123 bits (136), Expect = 3e-23
Identities = 107/133 (80%), Gaps = 0/133 (0%)
Strand=Plus/Minus
Query 77127 TGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGAT 77186
||||||||||| ||||| ||||| ||||| || || || |||||||| ||||| | ||
Sbjct 10335165 TGAAATTCTCCTGACAAGACTCTGCGAGTATAGATGTTGCTGGTATAAGGTTCAATGGAC 10335106
Query 77187 TCATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAATAAACTA 77246
||||| ||||||| ||| |||||||| |||||||| ||||| || || | | ||||||
Sbjct 10335105 TCATTATTTCCCAGAATCTGAGCAGTTGAAGCAGTAGGCATCGGGGCAATAAGTAAACTG 10335046
Query 77247 TTTCTGAGACCAT 77259
||||| | |||||
Sbjct 10335045 TTTCTTATACCAT 10335033
Score = 123 bits (136), Expect = 3e-23
Identities = 130/171 (76%), Gaps = 0/171 (0%)
Strand=Plus/Minus
Query 76849 TCCATCCGTAGAAATGCATGCTTGTCAGTTTGGAATAACTAGGATCGGCTATATGAATAT 76908
|||| |||||||||||||| || || |||||| ||| |||| || || || || || |
Sbjct 10337845 TCCAGCCGTAGAAATGCATACTGGTGAGTTTGCCATAGTTAGGCTCAGCAATGTGGATGT 10337786
Query 76909 TCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATAATGGTCT 76968
||| || || |||||||| |||||||| ||||| ||||| ||||| || | || ||| |
Sbjct 10337785 TCAAAGATTGGCTTTGATCAATGAAAGCACCTCTTTCAGCTGCCATCTTAAGAACGGTTT 10337726
Query 76969 TTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCATCTGGAA 77019
| || | ||||||||| | ||| || ||| ||| || | ||||| ||||
Sbjct 10337725 TCTGTGAAATTTCCCACACAGTCTTATAAAGTTGCTTCAGGTCATCAGGAA 10337675
Score = 102 bits (112), Expect = 1e-16
Identities = 112/149 (75%), Gaps = 0/149 (0%)
Strand=Plus/Minus
Query 78003 ACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGT 78062
||||||||||| |||||||| || ||||| || |||| || || || | || | |||
Sbjct 10325155 ACTCGTTTCATGAAGAGATCTGGAATCCAAAGGGCAAAGAAAAGGTCCCTGGCACGCTGT 10325096
Query 78063 TCTTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGT 78122
||||| |||||||| ||||| || | ||| |||||||| | ||| || ||||||| ||
Sbjct 10325095 TCTTCCTTTCCTGTGTTCTTCTTTAAATCCAGAAACTCAAAAATGTCTAAATGCCAAGGC 10325036
Query 78123 TCTAGATATATTGCCATAACTCCAGGTCG 78151
|| || || || || | | ||||||||
Sbjct 10325035 TCCAGGTAAATAGCAAATGCCCCAGGTCG 10325007
Score = 98.7 bits (108), Expect = 1e-15
Identities = 104/137 (76%), Gaps = 0/137 (0%)
Strand=Plus/Minus
Query 78399 GTTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAACCATTTTTCAGAAAGTAGATTG 78458
|| || ||||| || | || ||||| ||||| |||||||| || |||||||| || |||
Sbjct 10316807 GTACCAGCATTGAAGAGAGTGGGAGAGGCATGGGTAAACCACTTCTCAGAAAGAAGGTTG 10316748
Query 78459 TATGTTTCAATAGCTGATTCTATGTCCCATTGATGAATTCCTACCGCTACACGCATCAAC 78518
|||||||||||||| | || || || | ||||| || || | || | |||||||
Sbjct 10316747 TATGTTTCAATAGCAGCATCAATATCTTCTGCGTGAATCCCCACAGACACCCTCATCAAC 10316688
Query 78519 ATATGCTGAGGTCTTTC 78535
||||| || ||||||||
Sbjct 10316687 ATATGTTGTGGTCTTTC 10316671
Score = 86.0 bits (94), Expect = 9e-12
Identities = 64/75 (85%), Gaps = 0/75 (0%)
Strand=Plus/Minus
Query 77915 ATATAGCCGTTCAAATTCATCTCCCCAAACATCATCCAATCCAGGGCATTCATTTGGGCA 77974
||||||| |||||||| ||||||||||| ||||||| ||||| ||||||||||| ||
Sbjct 10325829 ATATAGCTTCTCAAATTCCTCTCCCCAAACCTCATCCAGACCAGGACATTCATTTGGACA 10325770
Query 77975 CATCAATGACCAGTC 77989
|| ||| ||||||||
Sbjct 10325769 CAACAAAGACCAGTC 10325755
>seq7842
Length=42459490
Score = 116 bits (128), Expect = 5e-21
Identities = 97/119 (82%), Gaps = 0/119 (0%)
Strand=Plus/Minus
Query 48165 TCATCTCTACTAATTAATTCGTTAGAAAATGTGAGACCGGGCATTAGTCCACGTTTTTTG 48224
|||||||| ||||| | ||| || ||||| ||||| || ||||| || || ||||| |||
Sbjct 7548463 TCATCTCTGCTAATAAGTTCATTGGAAAACGTGAGGCCAGGCATCAGGCCGCGTTTCTTG 7548404
Query 48225 AGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACGGCCGCAAATGC 48283
||||| ||||||| ||| ||||| ||||||||||| || ||||| || || ||||| ||
Sbjct 7548403 AGCCAGAATATTGACGCAAAAGAACCAGAAAAGAAGATTCCTTCCACAGCAGCAAAAGC 7548345
Score = 100 bits (110), Expect = 4e-16
Identities = 109/143 (76%), Gaps = 4/143 (3%)
Strand=Plus/Minus
Query 47791 TTCT-TTAAAAGTCAACATCTAAAGAAAAATGATTATCTTCTTGA---GACATAACTCCC 47846
|||| ||| |||||| |||| || | |||| ||| ||| | || ||||| ||||||
Sbjct 7549972 TTCTCTTAGAAGTCAGCATCCAAGGTAAAAGAATTCTCTGTTGGACTTGACATCACTCCC 7549913
Query 47847 ATTTTTTGATATTCACCCACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATA 47906
|| | ||||| || || || | ||||| || || ||||| || ||||||| ||| |||
Sbjct 7549912 ATCCTCTGATACTCGCCTACTCTCTTCTCAAAGAAGTTAGTCTTCCCTTCCAGTGAAATA 7549853
Query 47907 TTTTCCATAAAATCAAATGGATT 47929
|| |||||||| |||||||||||
Sbjct 7549852 TTCTCCATAAAGTCAAATGGATT 7549830
Score = 89.7 bits (98), Expect = 7e-13
Identities = 70/84 (83%), Gaps = 0/84 (0%)
Strand=Plus/Minus
Query 48638 TACTTCTTCAGCTGTCCAAAATGATGCCTCTGCTTTTTTATACATATTCCATATATCACT 48697
||| ||||||||||||||||| || ||||| ||||| |||||||| | ||| ||||||
Sbjct 7545341 TACCTCTTCAGCTGTCCAAAAGGAAGCCTCAGCTTTCTTATACATCTGCCAAATATCATG 7545282
Query 48698 GTATTGGATTGGGAAAATAACAAA 48721
||||| ||| ||||| || |||||
Sbjct 7545281 GTATTCGATAGGGAAGATGACAAA 7545258
>seq7786
Length=83011774
Score = 93.3 bits (102), Expect = 6e-14
Identities = 72/86 (84%), Gaps = 0/86 (0%)
Strand=Plus/Plus
Query 48638 TACTTCTTCAGCTGTCCAAAATGATGCCTCTGCTTTTTTATACATATTCCATATATCACT 48697
||| ||||| || ||||| || ||||||| ||| | ||||||||| ||||| ||||||
Sbjct 48132203 TACCTCTTCGGCCGTCCAGAAGGATGCCTGTGCCTGTTTATACATTTTCCAAATATCAGG 48132262
Query 48698 GTATTGGATTGGGAAAATAACAAATC 48723
||||||||||||||| || |||||||
Sbjct 48132263 GTATTGGATTGGGAAGATGACAAATC 48132288
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 694600444590080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |