Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neomonachus_20schauinslandi_20[genbank_20GCA_5F002201575.1_202017- 06-20] 7,872 sequences; 2,400,917,536 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq7767 334 1e-86 seq7820 257 2e-63 seq7870 127 3e-24 seq7842 116 5e-21 seq7786 105 1e-17 >seq7767 Length=50048226 Score = 334 bits (370), Expect = 1e-86 Identities = 640/937 (68%), Gaps = 12/937 (1%) Strand=Plus/Minus Query 46280 TTCT-TTAAAAGTCGACATCTAAAGAAAAATGATTATCTTCT-TGTGACATAACTCCCAT 46337 |||| ||| ||||| |||| || | |||| ||| | || | |||||| |||||||| Sbjct 16036806 TTCTCTTAGAAGTCAGCATCCAAGGTAAAAGAATTCTGTTGGATTTGACATCACTCCCAT 16036747 Query 46338 TTTTTGGTATTCACCTACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATT 46397 | || || |||||||| | ||||| || || || | ||||||| ||| ||||| Sbjct 16036746 CCTCTGATACTCACCTACTCTCTTCTCAAAGAAGTT-----TCCCTTCCAGTGAAATATT 16036692 Query 46398 TTCCATAAAATCAAACGGATTAGTAACATTATAAAtttttttAAATCCTAATTCTGAAAT 46457 ||||| || ||||| ||||| || | ||| || ||| |||| || || Sbjct 16036691 CTCCATGAAGTCAAATGGATTTTCTACTCTGAAAACCTTGCCAAAACCTAGCTCCAGCAT 16036632 Query 46458 CAGTCTATCTGCAACGAATTCTATATACGTTTTCATCATTTCACAATTCATTCCTATGAG 46517 |||| | ||| || || || ||| || ||||| | |||||||| || ||||| Sbjct 16036631 AAGTCGGTGTGCCACAAACTCAATACACTGCTTCATTAACGTGCAATTCATCCCAATGAG 16036572 Query 46518 TTTGACCGGTAGAGCCTCCGTAAGAAACTCTTGTTCAATAGTGACAGCATCCGATATTAT 46577 || | || | | |||||| || ||| | || || || || |||| ||||| Sbjct 16036571 CTTCAGGGGCAAGGTCTCCGTGAGGAACCCCTGCTCTATCCGAACGGCATTAATAATTAT 16036512 Query 46578 CGATGTTACTGTTTCCTCACTTGGTGGATGCATCAAATGTTTAAACATTAAACATGCAAA 46637 | ||| | | || ||| || | || ||||| ||||| | || ||||| Sbjct 16036511 TTCCTTCACTCTCTGCTTGGAAGGTTTGTGGACCAGGTGTTTGAACATCAGGCAGGCAAA 16036452 Query 46638 ATCACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGGCAT 46697 ||||| || | || |||||||| ||||| | ||| || ||||| || | |||||||| Sbjct 16036451 GTCACAGTGTAAACCCTCATCTCTGCTAATAAGTTCATTGGAAAACATGGGGCCAGGCAT 16036392 Query 46698 TAGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGCCTTC 46757 || |||| || |||||||| ||||| | ||| ||||| ||||||||||| || ||||| Sbjct 16036391 CAGGTCACGTTTCTTGAGCCAGAATATCGTCGCAAAAGAACCAGAAAAGAAGATTCCTTC 16036332 Query 46758 TACAGCCGCGAATGCGACAAGTCTCTCTCCGTAACTGGCATCATTATG---AATCCACCT 46814 ||||| || || | |||| | || ||||| | || || || | | |||| Sbjct 16036331 CACAGCAGCAAAGTCCACAACCCGTTCCCCGTAGGTAGCCTCTTTGTCCCCAGTCCAATG 16036272 Query 46815 TTGAGCCCAATCAGCCTTTTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGAAA 46874 ||||| || ||||| |||||||||||||||||||| || | || || |||||||| Sbjct 16036271 CAAGGCCCAGTCTGCCTTCTTCTTTACACAAGGCATTGTCTCGAGGGCGTTGAAGAGAAA 16036212 Query 46875 GtttttttCATCACTATCTTTAACATATGTATCTATTAAAAGACTATACATTTCTGAATG 46934 | |||| | |||||||||||| || || || | ||||| ||||| || ||||| Sbjct 16036211 TTCCCTTTCTTTGGAATCTTTAACATAAGTGTCAATGAGGAGACTGTACATCTCAGAATG 16036152 Query 46935 AATGTTTTCAATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATCTGTACCTC 46994 |||||||| || || || | || || || ||||| | ||||| |||||||| || || Sbjct 16036151 GATGTTTTCCATGGCAATTCGGAAGCCATAGAAACAGCGGGCTTCTGTAATCTGAACTTC 16036092 Query 46995 TGTACAAAATCGTTCAGACAAATTCTCATTCACTATTCCATCACTAGCAGCAAAAAATGC 47054 | | ||| || || ||| || ||||| ||||| |||||||| | ||||| || || Sbjct 16036091 TTGGCTAAACCGCTCCACCAAGTTTTCATTTACTATGCCATCACTCGGCGCAAAGAAAGC 16036032 Query 47055 CAATACATGTTTAATAAAATATTTTTCATCGGTAGTCAGTTTATTCC-AGTCATTGATAT 47113 || || || | ||| ||| | || || | |||| ||||| || | || | Sbjct 16036031 CAGAACGTGGGATAGAAAGTATCTCTCCTCAGGCTTCAG-GGATTCCTGGTGCTGAATGT 16035973 Query 47114 CTTTTGATATATCTACTTCTTCAGCTGTCCAGAATGACGCCTCTGCTTTTTTATACATAT 47173 | || || | ||| || |||||||||||||| || || ||||| ||||| | |||||| | Sbjct 16035972 CCTTGGAAAGATCCACCTCTTCAGCTGTCCAAAAGGAAGCCTCAGCTTTCTCATACATCT 16035913 Query 47174 TCCATATATCACGATATTGGATCGGAAAAATAACAAA 47210 ||| |||||| | || || || || || ||||| Sbjct 16035912 GCCAAATATCATGGTACCCGACAGGGAAGATGACAAA 16035876 >seq7820 Length=31847680 Score = 257 bits (284), Expect = 2e-63 Identities = 616/923 (67%), Gaps = 14/923 (2%) Strand=Plus/Minus Query 46323 TGACATAACTCCCATTTTTTGGTATTCACCTACACGTTTCTCGAAAAAATTAGTTTTGCC 46382 |||||| ||||| || | || || | ||| | | ||||| || || ||||| || || Sbjct 14843960 TGACATCACTCCTATCCTCTGATACTGGCCTCCTCTCTTCTCAAAGAAGTTAGTCTTCCC 14843901 Query 46383 TTCCAATGATATATTTTCCATAAAATCAAACGGATTAGTAACATTATAAAtttttttAAA 46442 ||||| ||| ||||| ||| ||| ||||| ||||| || | ||| || |||| Sbjct 14843900 TTCCAGTGAAATATTCTCCCTAAGGTCAAATGGATTTTCTACTCTGGAAACCTTGCTAAA 14843841 Query 46443 TCCTAATTCTGAAATCAGTCTATCTGCAACGAATTCTATATAC-GTTTTCATCATTTCAC 46501 |||| ||| | | |||| ||||| | |||||| |||||| | ||| | | | | Sbjct 14843840 ACCTAGTTCCTACCTAAGTCAGTCTGCCATGAATTCAATATACTGCTTTACTAACGTG-C 14843782 Query 46502 AATTCATTCCTATGAGTTTGACCGGTAGAGCCTCCGTAAGAAACTCTTGTTCAATAGTGA 46561 | ||||| || ||||| || | || | ||||| | || ||||| || || || | | Sbjct 14843781 AGTTCATCCCAATGAGCTTCGCGGGCAAGGCCTCTGGGAGGAACTCCTGGTCTATCCTAA 14843722 Query 46562 CAGCATCCGATA-TTATCGATGTTACTGTTTCCTCACTTGGTGGATGCATCAAATGTTTA 46620 | |||| |||| |||| | ||| | | ||| ||| ||| | || ||||| Sbjct 14843721 CGGCATT-GATAATTATTTCCTTCACTCTCTGCTCTGAAGGTTTATGGACCAGGTGTTTG 14843663 Query 46621 AACATTAAACATGCAAAATCACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAA 46680 ||||| | || ||||| | || | || |||||||| ||||| | || || ||| Sbjct 14843662 AACATCAGGCAGGCAAAGTTGTGGTGTAAACCCTCATCTCTGCTAATAAGCTCATTGGAA 14843603 Query 46681 AAT-GTGAGCCCAGGCATTAGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCC 46739 || | ||| |||||||| || | | || |||||||| ||||| | ||| |||| || Sbjct 14843602 AACCGCGAGGCCAGGCATCAGGCTGCATTTCTTGAGCCAGAATATCGACGCAGAAGAACC 14843543 Query 46740 AGAAAAGAATATGCCTTCTACAGCCGCGAATGCGACAAGTCTCTCTCCGTAACTGGCATC 46799 | ||||| | || ||||| || || || | ||| | || ||||| | || || Sbjct 14843542 AAAAAAGGAGATTCCTTCCGTGGCAGCAAAGTCCACATCCCATTCCCCGTAGGTAGCCTC 14843483 Query 46800 ATTATG---AATCCACCTTTGAGCCCAATCAGCCTTTTTCTTTACACAAGGCATTGTTTC 46856 || | || ||| | ||||| || ||||| ||| || ||||||||||||| || Sbjct 14843482 TTTGTCCCCAACCCAACGCAAGGCCCAGTCTGCCTTCTTCCTTCCACAAGGCATTGTCTC 14843423 Query 46857 TATAGCATTAAAGAGAAAGtttttttCATCACTATCTTTAACATATGTATCTATTAAAAG 46916 || | || |||||||| | | | || | |||||||| ||| || || | | || Sbjct 14843422 GATGGTGTTGAAGAGAAATTCTGTCTCTTTGGAATCTTTAATATAAGTGTCAGTGAGGAG 14843363 Query 46917 ACTATACATTTCTGAATGAATGTTTTCAATAGCCATCTGAAATCCGTAAAAACATCTTGC 46976 |||| |||| || ||||| |||||||| || || || || || || || ||||| | || Sbjct 14843362 ACTACACATCTCAGAATGGATGTTTTCCATGGCAATTTGGAAGCCATAGAAACAGCAGGC 14843303 Query 46977 TTCAGTAATCTGTACCTCTGTACAAAATCGTTCAGACAAATTCTCATTCACTATTCCATC 47036 ||| || |||| || ||| | | | || || ||| || ||||| ||||| ||| | Sbjct 14843302 TTCTGTCATCTCAACTTCTTGGCCACACCGCTCCACCAAGTTTTCATTTACTATGCCAAC 14843243 Query 47037 ACTAGCAGCAAAAAATGCC--AAT----ACATGTTTAATAAAATATTTTTCATCGGTAGT 47090 ||| || ||||| || ||| ||| || || ||||||| | | || || | | Sbjct 14843242 ACTCGCCGCAAAGAAAGCCAGAATGTGAACGTGGGGTATAAAATCTCTCTCCTCAGGCTT 14843183 Query 47091 CAGTTTATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAGAATGA 47150 ||| | ||||| | || || || || | || || |||||||||||||| || || Sbjct 14843182 CAGCGATTCCCAGTGTTGAATGTCCTTGGAAAGATTCACCTCTTCAGCTGTCCAAAAGGA 14843123 Query 47151 CGCCTCTGCTTTTTTATACATATTCCATATATCACGATATTGGATCGGAAAAATAACAAA 47210 ||||| ||||| ||| | || | ||| | |||| | || | || || || || ||||| Sbjct 14843122 AGCCTCAGCTTTCTTACATATCTGCCAAAGATCATGGTACTTCATAGGGAAGATGACAAA 14843063 Query 47211 TCTATTTGGATTTTTTGCAAGTA 47233 | | || |||| || |||| Sbjct 14843062 GCGAAGAGGGTTTTCTGTCAGTA 14843040 >seq7870 Length=10551609 Score = 127 bits (140), Expect = 3e-24 Identities = 108/133 (81%), Gaps = 0/133 (0%) Strand=Plus/Minus Query 75722 TGAAATTCTCCAGACAATACTCTTCGAGTGTAAATATTACTGGTATATGGTTCCACAGAT 75781 ||||||||||| ||||| ||||| ||||| || || || |||||||| ||||| | || Sbjct 10335165 TGAAATTCTCCTGACAAGACTCTGCGAGTATAGATGTTGCTGGTATAAGGTTCAATGGAC 10335106 Query 75782 TCATTGTTTCCCAAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACCAATAAACTA 75841 ||||| ||||||| ||| ||||||||||||||||| ||||| || || | | |||||| Sbjct 10335105 TCATTATTTCCCAGAATCTGAGCAGTTGAAGCAGTAGGCATCGGGGCAATAAGTAAACTG 10335046 Query 75842 TTTCTGAGACCAT 75854 ||||| | ||||| Sbjct 10335045 TTTCTTATACCAT 10335033 Score = 120 bits (132), Expect = 4e-22 Identities = 129/171 (75%), Gaps = 0/171 (0%) Strand=Plus/Minus Query 75444 TCCATCCGTAGAAATGCATGCTTGTTAGTTTGGAATAACTCGGATCGGCTATATGAATAT 75503 |||| |||||||||||||| || || |||||| ||| | || || || || || || | Sbjct 10337845 TCCAGCCGTAGAAATGCATACTGGTGAGTTTGCCATAGTTAGGCTCAGCAATGTGGATGT 10337786 Query 75504 TCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATAATGGTCT 75563 ||| || || |||||||| |||||||| ||||| ||||| ||||| || | || ||| | Sbjct 10337785 TCAAAGATTGGCTTTGATCAATGAAAGCACCTCTTTCAGCTGCCATCTTAAGAACGGTTT 10337726 Query 75564 TTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCATCTGGAA 75614 | || | ||||||||| | ||| || ||| ||| || | ||||| |||| Sbjct 10337725 TCTGTGAAATTTCCCACACAGTCTTATAAAGTTGCTTCAGGTCATCAGGAA 10337675 Score = 105 bits (116), Expect = 1e-17 Identities = 123/166 (74%), Gaps = 0/166 (0%) Strand=Plus/Minus Query 77339 CTAAATAGtttttttGTTTCCTTGTGTAGATTCGATACGGCTATTCTAGCAGCTAGAATT 77398 || || | ||| |||||||| ||||| | || || ||||| || || || || || || Sbjct 10311656 CTGAACACTTTCTTTGTTTCTTTGTGCAAGTTGGAGACGGCAATCCTTGCTGCCAGGATG 10311597 Query 77399 GCATAGTCAGGATGTTGTGTAGTGCAGGTGGCTGCTATTTCTGCCGCTAAAGTATCTAAT 77458 |||||||||||||| | || || |||| || ||| | || || || |||||||||| | Sbjct 10311596 GCATAGTCAGGATGCTTAGTCGTCAAGGTCGCAGCTGTCTCAGCAGCCAAAGTATCTAGT 10311537 Query 77459 TCTATAGTAGTAACTCCGTTATATAGCCCTTGAATAACTTTCATGG 77504 || | ||| || || || | |||| ||||| || |||||||||| Sbjct 10311536 TCCACAGTGGTGACCCCACTGTATAAGCCTTGGATTACTTTCATGG 10311491 Score = 100 bits (110), Expect = 4e-16 Identities = 105/138 (76%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 76994 GTTCCTGCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATTG 77053 || || ||||| || | || ||||| ||||| || ||||| || |||||||| || ||| Sbjct 10316807 GTACCAGCATTGAAGAGAGTGGGAGAGGCATGGGTAAACCACTTCTCAGAAAGAAGGTTG 10316748 Query 77054 TATGTTTCAATAACTGCTTCTATATCCCATTGATGAATTCCTACAGCGACACGCATCAAC 77113 |||||||||||| | || || ||||| | ||||| || |||| || | ||||||| Sbjct 10316747 TATGTTTCAATAGCAGCATCAATATCTTCTGCGTGAATCCCCACAGACACCCTCATCAAC 10316688 Query 77114 ATATGCTGAGGTCGTTCT 77131 ||||| || |||| |||| Sbjct 10316687 ATATGTTGTGGTCTTTCT 10316670 Score = 95.1 bits (104), Expect = 2e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 75950 GATCCATTATATGTTTCGTAAGTCCCGTCCTTTTCAGCTAGTTCGCAACTCGCCTCTAAC 76009 || || | ||| ||||| || | || | || | || || || || || || || || Sbjct 10330162 GAGCCCTCATAGGTTTCATATGGGCCATGCTCCTTGGCCAGGTCACAGCTGGCTTCCAAG 10330103 Query 76010 GCACCGTAATAAATTGTTTCGAAAATCTTCTTATTAAGATCTTGCGCTTCAAGACTATCA 76069 || || |||||||| ||||| || |||| |||||| || || ||||| |||| ||| Sbjct 10330102 GCTCCATAATAAATGGTTTCAAAGATCTGCTTATTCAGTAGCTGGGCTTCTGGACTCTCA 10330043 Query 76070 AAAGGATAATGTAAAAGAATAAATGCATCTGCTAGTCCCTGAACTCCAATACCAATAGGT 76129 |||||||| | |||||||| |||||||| || || || || || || ||||| || Sbjct 10330042 AAAGGATACCTCATCAGAATAAAAGCATCTGCCAGACCTTGTACCCCGATTCCAATGGGG 10329983 Query 76130 CTATGTCTCTTATTGGA 76146 | ||| | ||||| || Sbjct 10329982 CGATGGCATTTATTTGA 10329966 Score = 86.0 bits (94), Expect = 9e-12 Identities = 58/65 (89%), Gaps = 0/65 (0%) Strand=Plus/Minus Query 76520 TCAAATTCATCTCCCCAAACATCATCCAAACCAGGACATTCATTCGGACACATCAATGAC 76579 |||||||| ||||||||||| ||||||| ||||||||||||||| ||||||| ||| ||| Sbjct 10325819 TCAAATTCCTCTCCCCAAACCTCATCCAGACCAGGACATTCATTTGGACACAACAAAGAC 10325760 Query 76580 CACTC 76584 || || Sbjct 10325759 CAGTC 10325755 >seq7842 Length=42459490 Score = 116 bits (128), Expect = 5e-21 Identities = 100/124 (81%), Gaps = 0/124 (0%) Strand=Plus/Minus Query 46654 TCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGGCATTAGTCCACGCTTTTTG 46713 |||||||| ||||| | ||| || ||||| ||||| |||||||| || || || || ||| Sbjct 7548463 TCATCTCTGCTAATAAGTTCATTGGAAAACGTGAGGCCAGGCATCAGGCCGCGTTTCTTG 7548404 Query 46714 AGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACAGCCGCGAATGCG 46773 ||||| ||||| | ||| ||||| ||||||||||| || ||||| ||||| || || || Sbjct 7548403 AGCCAGAATATTGACGCAAAAGAACCAGAAAAGAAGATTCCTTCCACAGCAGCAAAAGCC 7548344 Query 46774 ACAA 46777 |||| Sbjct 7548343 ACAA 7548340 >seq7786 Length=83011774 Score = 105 bits (116), Expect = 1e-17 Identities = 105/136 (77%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 46652 CTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGGCATTAGTCCACGCTTTT 46711 |||||||||| || || | ||| || ||||| ||||| || ||||| || || | || | Sbjct 48121150 CTTCATCTCTGCTGATGAGTTCATTGGAAAACGTGAGTCCGGGCATGAGACCTCTTTTCT 48121209 Query 46712 TGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACAGCCGCGAATG 46771 | ||||| |||||||| || |||||||| || ||||| || ||||||||||| || || | Sbjct 48121210 TTAGCCAGAATATAGCAGCAAAAGATCCCGAGAAGAAAATCCCTTCTACAGCAGCAAAAG 48121269 Query 46772 CGACAAGTCTCTCTCC 46787 | || | ||| || || Sbjct 48121270 CCACCACTCTTTCCCC 48121285 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712864247255040