Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neomonachus_20schauinslandi_20[genbank_20GCA_5F002201575.1_202017- 06-20] 7,872 sequences; 2,400,917,536 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq7767 122 2e-22 seq7823 114 3e-20 seq7857 111 4e-19 seq7828 111 4e-19 seq7858 107 4e-18 seq7846 100 7e-16 seq7818 100 7e-16 seq7764 89.7 1e-12 seq7865 84.2 5e-11 >seq7767 Length=50048226 Score = 122 bits (134), Expect = 2e-22 Identities = 154/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 151896 ACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCT 151955 |||||||||||||||||||| ||||| |||||||| || | ||||| | |||||||| Sbjct 33066748 ACAAGATGAAGAGTAGACTCCTTTTGAATGTTGTAGTCAGACAAAGTGCGTCCATCTTCC 33066807 Query 151956 AGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGA 152015 || || || || ||||| || |||||||| || | | ||||||||||| || ||| Sbjct 33066808 AGTTGCTTGCCAGCAAAGATCAGTCTCTGCTGATCAGGAGGAATTCCTTCCTTATCCTGA 33066867 Query 152016 ATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTG 152075 || || || ||| | |||| | || || || || || || || || || || Sbjct 33066868 ATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGATCAACCTCGAGGGTGATGGTCTTC 33066927 Query 152076 CCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107 ||||| || || |||||||| | |||||| || Sbjct 33066928 CCCGTAAGGGTTTTCACGAAAATCTGCATCTT 33066959 >seq7823 Length=12955506 Score = 114 bits (126), Expect = 3e-20 Identities = 161/225 (72%), Gaps = 6/225 (3%) Strand=Plus/Minus Query 151883 CCTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGT 151942 ||| || | ||| || || || ||||| |||||||| |||||||||||||| | | ||| Sbjct 3355547 CCTCAGACGGAGAACCAGGTGGAGAGTTGACTCTTTCTGGATGTTGTAATCAGAAAGAGT 3355488 Query 151943 TCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCC 152002 | |||||||| || || || || || || |||||||||||||| | | ||| || Sbjct 3355487 GCGGCCATCTTCCAGCTGCTTGCCTGCAAAAATGAGCCTCTGCTGGTCAGGGGGGATGCC 3355428 Query 152003 TTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTC 152059 || || ||||| || || || || | || | | |||| ||| ||| || || Sbjct 3355427 CTCTTTATCTTGGATCTTGGCCTTCACGTTTTCGATGGTGTC---ACTGGGCTCCACCTC 3355371 Query 152060 AAGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || || || ||||| || || ||||||||||||| |||||| Sbjct 3355370 CAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 3355326 Score = 98.7 bits (108), Expect = 2e-15 Identities = 158/228 (69%), Gaps = 16/228 (7%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 ||||| || || || || |||||||| |||||||||||||| | | ||| | |||||| Sbjct 3355309 AGGACCAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCT 3355250 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || || || || ||||| |||||||||||||| | | ||| || || || ||| Sbjct 3355249 TCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGGGGGGATGCCCTCTTTATCT 3355190 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCAAGAGTAATA 152069 || || || || ||| | || | | |||| ||| ||| || || || || || Sbjct 3355189 TGGATCTTGGCCTTCACATTTTCGATGGTGTC---ACTGGGCTCCACCTCCAGGGTGATG 3355133 Query 152070 GTTTTGCCC----------GTGAGAGTCTTCACGAAGACCTGCATTTT 152107 || ||||| || | ||||||||||||| ||||||||| Sbjct 3355132 GTCTTGCCNNNNNNNNNNAGTCAAGGTCTTCACGAAGATCTGCATTTT 3355085 >seq7857 Length=43258702 Score = 111 bits (122), Expect = 4e-19 Identities = 155/216 (72%), Gaps = 6/216 (3%) Strand=Plus/Plus Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951 ||| || || || ||||| |||||||| ||||| |||||||| | | ||| | ||||| Sbjct 31543459 GAGAACCAGGTGGAGAGTTGACTCTTTCTGGATATTGTAATCAGAAAGAGTGCGGCCATC 31543518 Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011 ||| | || | ||| |||||||||||||||||||| | | ||| || || || | Sbjct 31543519 TTCCATCTGCTTGCTGGCAAAGATAAGCCTCTGCTGGTCAGGGGGGATGCCCTCTTTATA 31543578 Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCAAGAGTAAT 152068 ||| || || || ||| | || | | |||| ||| ||| || || || || || Sbjct 31543579 TTGGATATTCGCCTTCACATTTTCAATGGTGTC---ACTGGGCTCCACCTCCAGGGTGAT 31543635 Query 152069 AGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || ||||| || || ||||||||||||| |||||| Sbjct 31543636 GGTCTTGCCGGTTAGGGTCTTCACGAAGATCTGCAT 31543671 Score = 105 bits (116), Expect = 2e-17 Identities = 155/218 (71%), Gaps = 6/218 (3%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || || || || || || |||||||| |||||||| ||||| | | ||| | |||||| Sbjct 31543688 AGAACCAGGTGCAGGGTCGACTCTTTCTGGATGTTATAATCAGAAAGAGTGCGGCCATCT 31543747 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || || || || || || |||||||||||||| | | ||| || || || ||| Sbjct 31543748 TCCAGCTGCTTGCCTGCAAAAATGAGCCTCTGCTGGTCAGGGGGGATGCCCTCTTTATCT 31543807 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCAAGAGTAATA 152069 || || || || ||| | || | | |||| ||| ||| || || || | || Sbjct 31543808 TGGATCTTGGCCTTCACATTTTCGATGATGTC---ACTGGGCTCCACCTCCAGGGGGATG 31543864 Query 152070 GTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107 || ||||| || || ||||||||||||| ||||||||| Sbjct 31543865 GTCTTGCCGGTTAGGGTCTTCACGAAGATCTGCATTTT 31543902 Score = 102 bits (112), Expect = 2e-16 Identities = 155/221 (70%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 151887 AGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTC 151946 ||||| | |||||||||||||| ||||| ||||| ||||||| || | | ||| | Sbjct 24178172 AGTCTTAACACAAGATGAAGAGTGGACTCCTTTTGAGTGTTGTAGTCAGACAGAGTGCGT 24178113 Query 151947 CCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCC 152006 |||||||| || || || || ||||| | |||||||| || | | ||||||||| Sbjct 24178112 CCATCTTCCAGTTGCTTGCCAGCAAAGATCAATCTCTGCTGATCAGGAGGAATTCCTTCC 24178053 Query 152007 TTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTA 152066 || || ||||| || || ||| | | || | || || || | || ||||| Sbjct 24178052 TTATCCTGAATCTTGGCCTTTACATTTTGTATTGTATCCGAGGGTTCAGCCTCGAGAGTG 24177993 Query 152067 ATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107 || || || ||| | ||||| |||||||| | |||||| || Sbjct 24177992 ATGGTCTTCCCCATAAGAGTTTTCACGAAAATCTGCATCTT 24177952 >seq7828 Length=21597463 Score = 111 bits (122), Expect = 4e-19 Identities = 157/221 (71%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 151887 AGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTC 151946 ||||| | |||||||||||||| ||||| ||||| |||||||| || | |||| | Sbjct 14213369 AGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGGACGT 14213428 Query 151947 CCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCC 152006 |||||||| || || || || ||||| || |||||||| || | | ||||||||| Sbjct 14213429 CCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTCTGCTGATCAGGAGGAATTCCTTCC 14213488 Query 152007 TTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTA 152066 || | ||||| || || | | | |||| | || || || || || ||||| Sbjct 14213489 TTATTCTGAATCTTGGCCTTTATATTTTCTATTGTATCCGAGGGTTCAACCTCGAGAGTG 14213548 Query 152067 ATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107 || || || ||||| || || |||||||| | |||||| || Sbjct 14213549 ATGGTCTTCCCCGTAAGGGTTTTCACGAAAATCTGCATCTT 14213589 Score = 100 bits (110), Expect = 7e-16 Identities = 151/211 (72%), Gaps = 8/211 (4%) Strand=Plus/Minus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| || || || |||||||| ||||| || || || | | ||| | |||||||||| Sbjct 10995415 CAAG-TGCAGGGTGGACTCTTTCTGGATATTATAGTCTGACAGAGTACAGCCATCTTCTA 10995357 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 | ||| || || || | || | ||||||||| | || ||| || |||| ||||| | Sbjct 10995356 GCTATTTGCCCGCAAAAGTCAGACACTGCTGGTCAGGCGGGATGCCCTCCTGGTCTTGGA 10995297 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCAAGAGTAATAGTTT 152073 |||| ||||||| |||| | |||| ||| ||| || || || || || || | Sbjct 10995296 TTTTGGCTTTGACATTCTCAGTGGTGTC---ACTGGGCTCGACCTC-AGGGTGATGGTCT 10995241 Query 152074 TGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 |||| ||||| | |||||| |||| |||||| Sbjct 10995240 TGCCTGTGAGGGCCTTCACAAAGATCTGCAT 10995210 >seq7858 Length=29646629 Score = 107 bits (118), Expect = 4e-18 Identities = 161/225 (72%), Gaps = 8/225 (4%) Strand=Plus/Plus Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951 ||| || || ||| |||| |||||||| |||||||||||||| | | ||| | ||||| Sbjct 23743190 GAGAACCAGGTGA-GAGTCGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATC 23743248 Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTT-T 152010 ||| || || | ||| ||||| ||||||| |||||| | | ||| || |||||| | Sbjct 23743249 TTCCAGCTGCTTGCTGGCAAAGATGAGCCTCTCCTGGTCAGGGGGGATGCCCTCCTTTAT 23743308 Query 152011 CTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCAAGAGTAA 152067 | || || || || ||| | || | | |||| ||| ||| || || || || | Sbjct 23743309 CCTGGATCTTGGCCTTCACATTTTCGATGGTGTC---ACTGGGCTCCACCTCCAGGGTGA 23743365 Query 152068 TAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTTACCCT 152112 | || |||| || || ||||||| ||||| |||||||| | ||| Sbjct 23743366 TGGTCTTGCTGGTCAGGGTCTTCATGAAGATCTGCATTTCAACCT 23743410 Score = 98.7 bits (108), Expect = 2e-15 Identities = 152/217 (70%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 151887 AGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTC 151946 ||||| | |||||||||||||||||||| ||||| |||||||| || | ||||| | Sbjct 12424744 AGTCTCAACACAAGATGAAGAGTAGACTCCTTTTGAATGTTGTAGTCAGACAAAGTGCAT 12424803 Query 151947 CCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCC 152006 |||| ||| || || || || | ||| || |||||||| || | | ||||||||| Sbjct 12424804 CCATTTTCCAGTTGCTTGCCAGCAACGATCAGTCTCTGCTGATCAGGAGGAATTCCTTCC 12424863 Query 152007 TTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTA 152066 || || ||||| || | ||| | |||| | || || || || || || Sbjct 12424864 TTATCCTGAATCTTGGCCTGTACATTTTCTATTGTATCCGAGGGTTCAGGCTCGAGGGTG 12424923 Query 152067 ATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCA 152103 || || || |||||||| || |||| ||| | ||||| Sbjct 12424924 ATGGTCTTCCCCGTGAGGGTTTTCAGGAAAATCTGCA 12424960 >seq7846 Length=12828309 Score = 100 bits (110), Expect = 7e-16 Identities = 152/215 (71%), Gaps = 6/215 (3%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 ||||| | || ||||| ||||| || ||||||||||| || | | || | ||| || Sbjct 9163024 AGGACCAAGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCTGACAGGGTGCGCCCGTCC 9163083 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || ||||||||| ||||| | |||||||||||| | | ||| || || || || Sbjct 9163084 TCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCGGGGGGGATGCCCTCTTTGTCC 9163143 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCAAGAGTAATA 152069 || || || ||||| |||| | | |||| ||| ||| || || || || || Sbjct 9163144 TGGATCTTCGCCTTGACGTTCTCGATGGTGTC---ACTGGGCTCCACCTCCAGGGTGATG 9163200 Query 152070 GTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || || || | ||||||||||||| |||||| Sbjct 9163201 GTCTTACCGGTCAAGGTCTTCACGAAGATCTGCAT 9163235 >seq7818 Length=84771923 Score = 100 bits (110), Expect = 7e-16 Identities = 157/223 (70%), Gaps = 4/223 (2%) Strand=Plus/Minus Query 151887 AGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTC 151946 ||||| | |||||||||||||| ||||| ||||| |||||||| || ||||| | Sbjct 26785806 AGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGATGGACAAAGTACGT 26785747 Query 151947 CCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCC 152006 ||||| | || || || || ||||| || |||||||| || | ||| ||||| Sbjct 26785746 TCATCTCCCAGTTGCTTGCCAGCAAAGATCAGTCTCTGCTGATCACAAGGAATTTCTTCC 26785687 Query 152007 TTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGT--CTGAACTCTCTACTTCAAGAG 152064 || || ||||| || || || | ||| | ||| | || || || ||||||| Sbjct 26785686 TTATCCTGAATCTTGACCTTTGCATTGTCT--GTTGTAGCCGAGGGTTCAACCTCAAGAG 26785629 Query 152065 TAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107 | ||||| || || || || || |||||||| | ||||||||| Sbjct 26785628 TGATAGTCTTCCCGGTAAGGGTTTTCACGAAAATCTGCATTTT 26785586 >seq7764 Length=47977530 Score = 89.7 bits (98), Expect = 1e-12 Identities = 153/221 (69%), Gaps = 2/221 (1%) Strand=Plus/Plus Query 151887 AGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTC 151946 ||||| | |||||||||||||| ||||| ||||| ||| |||| || |||||| Sbjct 26988208 AGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGCTGTAGTCACACAAAGTTTGT 26988267 Query 151947 CCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCC 152006 | ||||| || || || | |||||| || ||||||| || | | ||||||||| Sbjct 26988268 CTGTCTTCCAGTTGCTTGCCAGTGAAGATCAG--TCTGCTGATCAGGAGGAATTCCTTCC 26988325 Query 152007 TTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTA 152066 || || || || || || ||| | ||||| | |||| || || || ||||| Sbjct 26988326 TTATCCTGGATCTTGGCCTTTACATTTTCTACTGTACCTGAGGATTCAACCTCGAGAGTG 26988385 Query 152067 ATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107 || || || ||| | || || ||||| || | |||||| || Sbjct 26988386 ATGGTCTTCCCCATAAGGGTTTTCACAAAAATCTGCATCTT 26988426 >seq7865 Length=68117122 Score = 84.2 bits (92), Expect = 5e-11 Identities = 149/214 (70%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951 ||| || || || ||||| ||| |||| |||||||||||||| | ||||| ||||| Sbjct 16996668 GAGAACCAGGTGCAGAGTGGACCCTTTCTGGATGTTGTAATCAG-AAAAGTGAGGCCATC 16996610 Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGA-TTCCTTCCTTTT 152010 ||| || || || || ||||| |||||||||||||| | | | | ||||| || | Sbjct 16996609 TTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGAGGGTACTGCCTTCTTTAT 16996550 Query 152011 CTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAG 152070 |||| || || || ||| ||| | | |||| || || || ||||| |||| Sbjct 16996549 CTTGGATCTTAGCCTTCACATTCTTGATGGTGTCAATGGGTTCCACCTCTAGAGTGATAG 16996490 Query 152071 TTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 | |||| || |||| |||| || | |||||| Sbjct 16996489 TCTTGCTGGT--CAGTCCTCACAAACATCTGCAT 16996458 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153704425634112