Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Neomonachus_20schauinslandi_20[genbank_20GCA_5F002201575.1_202017-
06-20] 7,872 sequences; 2,400,917,536 total letters
Query= NC_032111.1
Length=163005
Score E
Sequences producing significant alignments: (Bits) Value
seq7767 170 2e-37
seq7820 93.3 4e-14
seq7753 86.0 7e-12
seq7736 86.0 7e-12
seq7580 86.0 7e-12
seq7867 84.2 2e-11
>seq7767
Length=50048226
Score = 170 bits (188), Expect = 2e-37
Identities = 373/559 (67%), Gaps = 0/559 (0%)
Strand=Plus/Minus
Query 23509 CATGCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAAAATGTTAAT 23568
|| ||||| ||||| |||| || ||||| || ||||| | |||||| ||||| |
Sbjct 16036459 CAGGCAAAGTCACAGTGTAAACCCTCATCTCTGCTAATAAGTTCATTGGAAAACATGGGG 16036400
Query 23569 CCTGGCATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAATGATCCGGAAAAGAAA 23628
|| ||||| | | ||||| || | ||| ||||| | ||||| || || ||||||||
Sbjct 16036399 CCAGGCATCAGGTCACGTTTCTTGAGCCAGAATATCGTCGCAAAAGAACCAGAAAAGAAG 16036340
Query 23629 ATACCCTCAACAGCCGCAAAGGCCACAAGACGTGTACCAAATGTTGCATTATAATCAGAA 23688
|| || || ||||| |||||| |||||| ||| || | || || | | || |
Sbjct 16036339 ATTCCTTCCACAGCAGCAAAGTCCACAACCCGTTCCCCGTAGGTAGCCTCTTTGTCCCCA 16036280
Query 23689 ATCCAtttttttGTCCAATTAGCCTTCAATTTTACACACTCAATTGTTTCAATTGCTTTT 23748
|||| | | ||| | |||||| |||||||| ||||| || | || ||
Sbjct 16036279 GTCCAATGCAAGGCCCAGTCTGCCTTCTTCTTTACACAAGGCATTGTCTCGAGGGCGTTG 16036220
Query 23749 AAGAGAAAAGTTTTTTCTTCATTATCTGTTATATATGTATCAATTAGTAAACTATACATT 23808
|||||||| |||||| |||| | | ||| || ||||| || | ||| |||||
Sbjct 16036219 AAGAGAAATTCCCTTTCTTTGGAATCTTTAACATAAGTGTCAATGAGGAGACTGTACATC 16036160
Query 23809 TCAGAATGAATATTTTCAATAGCAATCTGAAACCCATAAAAACATCTAGCTTCAGACAAT 23868
|||||||| || ||||| || ||||| | || ||||| ||||| | ||||| | |
Sbjct 16036159 TCAGAATGGATGTTTTCCATGGCAATTCGGAAGCCATAGAAACAGCGGGCTTCTGTAATC 16036100
Query 23869 TGAACATCATTAAAAAATCTTTTAGCTAAATTTTCGTTAACAATACCATCACTAGCAGCA 23928
||||| || | ||| | | | || ||||| || || || |||||||| | |||
Sbjct 16036099 TGAACTTCTTGGCTAAACCGCTCCACCAAGTTTTCATTTACTATGCCATCACTCGGCGCA 16036040
Query 23929 AAGAAAGCAAGAACATATTTTATAAAATGTCTTTCATCAGTTGATAATTTTTTCCAATCA 23988
|||||||| ||||| | || ||| | ||| || |||| | || | |
Sbjct 16036039 AAGAAAGCCAGAACGTGGGATAGAAAGTATCTCTCCTCAGGCTTCAGGGATTCCTGGTGC 16035980
Query 23989 TTAATATCTTTTGATAAATCAACTTCATCAACTGTCCAAAAACTTGCCAAGGCACGCTTA 24048
| ||| || || || | ||| || || ||| |||||||||| ||| || || |
Sbjct 16035979 TGAATGTCCTTGGAAAGATCCACCTCTTCAGCTGTCCAAAAGGAAGCCTCAGCTTTCTCA 16035920
Query 24049 TACATTAGCCAAATATCAT 24067
||||| ||||||||||||
Sbjct 16035919 TACATCTGCCAAATATCAT 16035901
>seq7820
Length=31847680
Score = 93.3 bits (102), Expect = 4e-14
Identities = 147/211 (70%), Gaps = 0/211 (0%)
Strand=Plus/Minus
Query 23731 ATTGTTTCAATTGCTTTTAAGAGAAAAGTTTTTTCTTCATTATCTGTTATATATGTATCA 23790
||||| || || | || |||||||| | | |||| |||| | ||||| || |||
Sbjct 14843430 ATTGTCTCGATGGTGTTGAAGAGAAATTCTGTCTCTTTGGAATCTTTAATATAAGTGTCA 14843371
Query 23791 ATTAGTAAACTATACATTTCAGAATGAATATTTTCAATAGCAATCTGAAACCCATAAAAA 23850
| || | |||| |||| |||||||| || ||||| || ||||| || || ||||| |||
Sbjct 14843370 GTGAGGAGACTACACATCTCAGAATGGATGTTTTCCATGGCAATTTGGAAGCCATAGAAA 14843311
Query 23851 CATCTAGCTTCAGACAATTGAACATCATTAAAAAATCTTTTAGCTAAATTTTCGTTAACA 23910
|| | ||||| | || | ||| || | | | | | | || ||||| || ||
Sbjct 14843310 CAGCAGGCTTCTGTCATCTCAACTTCTTGGCCACACCGCTCCACCAAGTTTTCATTTACT 14843251
Query 23911 ATACCATCACTAGCAGCAAAGAAAGCAAGAA 23941
|| ||| |||| || ||||||||||| ||||
Sbjct 14843250 ATGCCAACACTCGCCGCAAAGAAAGCCAGAA 14843220
>seq7753
Length=9543811
Score = 86.0 bits (94), Expect = 7e-12
Identities = 62/72 (86%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 8405 CTCCCGGGTTCAAGCTATTCTCCTGCCTCAGCCTCCAGAGTAGCTGGGATTACAGGCAAA 8464
|||| ||| ||||| || ||||||||||||||||| |||||||||||| |||||||| |
Sbjct 1992833 CTCCTGGGCGCAAGCGATCCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCACA 1992774
Query 8465 AGCCACCACGCC 8476
|||||| ||||
Sbjct 1992773 TGCCACCGCGCC 1992762
>seq7736
Length=31055087
Score = 86.0 bits (94), Expect = 7e-12
Identities = 73/90 (81%), Gaps = 0/90 (0%)
Strand=Plus/Minus
Query 8387 GCTCACTGCAACCTCCGCCTCCCGGGTTCAAGCTATTCTCCTGCCTCAGCCTCCAGAGTA 8446
|| |||| || ||| | |||| ||| |||||| || ||||||||||||||||| |||||
Sbjct 11719454 GCGCACTACAGCCTAGGACTCCTGGGCTCAAGCGATCCTCCTGCCTCAGCCTCCCGAGTA 11719395
Query 8447 GCTGGGATTACAGGCAAAAGCCACCACGCC 8476
||||||| ||||||| || ||||||||
Sbjct 11719394 GCTGGGACTACAGGCGCGCGCTACCACGCC 11719365
>seq7580
Length=1266
Score = 86.0 bits (94), Expect = 7e-12
Identities = 73/90 (81%), Gaps = 0/90 (0%)
Strand=Plus/Minus
Query 8387 GCTCACTGCAACCTCCGCCTCCCGGGTTCAAGCTATTCTCCTGCCTCAGCCTCCAGAGTA 8446
|| |||| || ||| |||| ||| |||||| || ||||||| ||||||||| |||||
Sbjct 707 GCGCACTACAGCCTAGAACTCCTGGGCTCAAGCAATCCTCCTGCTTCAGCCTCCCGAGTA 648
Query 8447 GCTGGGATTACAGGCAAAAGCCACCACGCC 8476
||||||| |||||||| | ||||||| |||
Sbjct 647 GCTGGGACTACAGGCACACGCCACCATGCC 618
>seq7867
Length=15105129
Score = 84.2 bits (92), Expect = 2e-11
Identities = 69/84 (82%), Gaps = 0/84 (0%)
Strand=Plus/Plus
Query 8405 CTCCCGGGTTCAAGCTATTCTCCTGCCTCAGCCTCCAGAGTAGCTGGGATTACAGGCAAA 8464
|||| ||| |||||| || ||||||||||||||||| |||||||||||| |||||||
Sbjct 11599285 CTCCTGGGCTCAAGCGATCCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCG 11599344
Query 8465 AGCCACCACGCCAAGCTAATTTTT 8488
|||||| |||| || ||||||
Sbjct 11599345 CGCCACCGCGCCCGGCATATTTTT 11599368
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 521436685580800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |