Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neomonachus_20schauinslandi_20[genbank_20GCA_5F002201575.1_202017- 06-20] 7,872 sequences; 2,400,917,536 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq7767 170 2e-37 seq7820 93.3 4e-14 seq7753 86.0 7e-12 seq7736 86.0 7e-12 seq7580 86.0 7e-12 seq7867 84.2 2e-11 >seq7767 Length=50048226 Score = 170 bits (188), Expect = 2e-37 Identities = 373/559 (67%), Gaps = 0/559 (0%) Strand=Plus/Minus Query 23509 CATGCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAAAATGTTAAT 23568 || ||||| ||||| |||| || ||||| || ||||| | |||||| ||||| | Sbjct 16036459 CAGGCAAAGTCACAGTGTAAACCCTCATCTCTGCTAATAAGTTCATTGGAAAACATGGGG 16036400 Query 23569 CCTGGCATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAATGATCCGGAAAAGAAA 23628 || ||||| | | ||||| || | ||| ||||| | ||||| || || |||||||| Sbjct 16036399 CCAGGCATCAGGTCACGTTTCTTGAGCCAGAATATCGTCGCAAAAGAACCAGAAAAGAAG 16036340 Query 23629 ATACCCTCAACAGCCGCAAAGGCCACAAGACGTGTACCAAATGTTGCATTATAATCAGAA 23688 || || || ||||| |||||| |||||| ||| || | || || | | || | Sbjct 16036339 ATTCCTTCCACAGCAGCAAAGTCCACAACCCGTTCCCCGTAGGTAGCCTCTTTGTCCCCA 16036280 Query 23689 ATCCAtttttttGTCCAATTAGCCTTCAATTTTACACACTCAATTGTTTCAATTGCTTTT 23748 |||| | | ||| | |||||| |||||||| ||||| || | || || Sbjct 16036279 GTCCAATGCAAGGCCCAGTCTGCCTTCTTCTTTACACAAGGCATTGTCTCGAGGGCGTTG 16036220 Query 23749 AAGAGAAAAGTTTTTTCTTCATTATCTGTTATATATGTATCAATTAGTAAACTATACATT 23808 |||||||| |||||| |||| | | ||| || ||||| || | ||| ||||| Sbjct 16036219 AAGAGAAATTCCCTTTCTTTGGAATCTTTAACATAAGTGTCAATGAGGAGACTGTACATC 16036160 Query 23809 TCAGAATGAATATTTTCAATAGCAATCTGAAACCCATAAAAACATCTAGCTTCAGACAAT 23868 |||||||| || ||||| || ||||| | || ||||| ||||| | ||||| | | Sbjct 16036159 TCAGAATGGATGTTTTCCATGGCAATTCGGAAGCCATAGAAACAGCGGGCTTCTGTAATC 16036100 Query 23869 TGAACATCATTAAAAAATCTTTTAGCTAAATTTTCGTTAACAATACCATCACTAGCAGCA 23928 ||||| || | ||| | | | || ||||| || || || |||||||| | ||| Sbjct 16036099 TGAACTTCTTGGCTAAACCGCTCCACCAAGTTTTCATTTACTATGCCATCACTCGGCGCA 16036040 Query 23929 AAGAAAGCAAGAACATATTTTATAAAATGTCTTTCATCAGTTGATAATTTTTTCCAATCA 23988 |||||||| ||||| | || ||| | ||| || |||| | || | | Sbjct 16036039 AAGAAAGCCAGAACGTGGGATAGAAAGTATCTCTCCTCAGGCTTCAGGGATTCCTGGTGC 16035980 Query 23989 TTAATATCTTTTGATAAATCAACTTCATCAACTGTCCAAAAACTTGCCAAGGCACGCTTA 24048 | ||| || || || | ||| || || ||| |||||||||| ||| || || | Sbjct 16035979 TGAATGTCCTTGGAAAGATCCACCTCTTCAGCTGTCCAAAAGGAAGCCTCAGCTTTCTCA 16035920 Query 24049 TACATTAGCCAAATATCAT 24067 ||||| |||||||||||| Sbjct 16035919 TACATCTGCCAAATATCAT 16035901 >seq7820 Length=31847680 Score = 93.3 bits (102), Expect = 4e-14 Identities = 147/211 (70%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 23731 ATTGTTTCAATTGCTTTTAAGAGAAAAGTTTTTTCTTCATTATCTGTTATATATGTATCA 23790 ||||| || || | || |||||||| | | |||| |||| | ||||| || ||| Sbjct 14843430 ATTGTCTCGATGGTGTTGAAGAGAAATTCTGTCTCTTTGGAATCTTTAATATAAGTGTCA 14843371 Query 23791 ATTAGTAAACTATACATTTCAGAATGAATATTTTCAATAGCAATCTGAAACCCATAAAAA 23850 | || | |||| |||| |||||||| || ||||| || ||||| || || ||||| ||| Sbjct 14843370 GTGAGGAGACTACACATCTCAGAATGGATGTTTTCCATGGCAATTTGGAAGCCATAGAAA 14843311 Query 23851 CATCTAGCTTCAGACAATTGAACATCATTAAAAAATCTTTTAGCTAAATTTTCGTTAACA 23910 || | ||||| | || | ||| || | | | | | | || ||||| || || Sbjct 14843310 CAGCAGGCTTCTGTCATCTCAACTTCTTGGCCACACCGCTCCACCAAGTTTTCATTTACT 14843251 Query 23911 ATACCATCACTAGCAGCAAAGAAAGCAAGAA 23941 || ||| |||| || ||||||||||| |||| Sbjct 14843250 ATGCCAACACTCGCCGCAAAGAAAGCCAGAA 14843220 >seq7753 Length=9543811 Score = 86.0 bits (94), Expect = 7e-12 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 8405 CTCCCGGGTTCAAGCTATTCTCCTGCCTCAGCCTCCAGAGTAGCTGGGATTACAGGCAAA 8464 |||| ||| ||||| || ||||||||||||||||| |||||||||||| |||||||| | Sbjct 1992833 CTCCTGGGCGCAAGCGATCCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCACA 1992774 Query 8465 AGCCACCACGCC 8476 |||||| |||| Sbjct 1992773 TGCCACCGCGCC 1992762 >seq7736 Length=31055087 Score = 86.0 bits (94), Expect = 7e-12 Identities = 73/90 (81%), Gaps = 0/90 (0%) Strand=Plus/Minus Query 8387 GCTCACTGCAACCTCCGCCTCCCGGGTTCAAGCTATTCTCCTGCCTCAGCCTCCAGAGTA 8446 || |||| || ||| | |||| ||| |||||| || ||||||||||||||||| ||||| Sbjct 11719454 GCGCACTACAGCCTAGGACTCCTGGGCTCAAGCGATCCTCCTGCCTCAGCCTCCCGAGTA 11719395 Query 8447 GCTGGGATTACAGGCAAAAGCCACCACGCC 8476 ||||||| ||||||| || |||||||| Sbjct 11719394 GCTGGGACTACAGGCGCGCGCTACCACGCC 11719365 >seq7580 Length=1266 Score = 86.0 bits (94), Expect = 7e-12 Identities = 73/90 (81%), Gaps = 0/90 (0%) Strand=Plus/Minus Query 8387 GCTCACTGCAACCTCCGCCTCCCGGGTTCAAGCTATTCTCCTGCCTCAGCCTCCAGAGTA 8446 || |||| || ||| |||| ||| |||||| || ||||||| ||||||||| ||||| Sbjct 707 GCGCACTACAGCCTAGAACTCCTGGGCTCAAGCAATCCTCCTGCTTCAGCCTCCCGAGTA 648 Query 8447 GCTGGGATTACAGGCAAAAGCCACCACGCC 8476 ||||||| |||||||| | ||||||| ||| Sbjct 647 GCTGGGACTACAGGCACACGCCACCATGCC 618 >seq7867 Length=15105129 Score = 84.2 bits (92), Expect = 2e-11 Identities = 69/84 (82%), Gaps = 0/84 (0%) Strand=Plus/Plus Query 8405 CTCCCGGGTTCAAGCTATTCTCCTGCCTCAGCCTCCAGAGTAGCTGGGATTACAGGCAAA 8464 |||| ||| |||||| || ||||||||||||||||| |||||||||||| ||||||| Sbjct 11599285 CTCCTGGGCTCAAGCGATCCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCG 11599344 Query 8465 AGCCACCACGCCAAGCTAATTTTT 8488 |||||| |||| || |||||| Sbjct 11599345 CGCCACCGCGCCCGGCATATTTTT 11599368 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521436685580800