Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Neomonachus_20schauinslandi_20[genbank_20GCA_5F002201575.1_202017-
06-20] 7,872 sequences; 2,400,917,536 total letters
Query= NC_032255.1
Length=112536
Score E
Sequences producing significant alignments: (Bits) Value
seq7846 138 8e-28
seq7828 132 3e-26
seq7857 118 8e-22
seq7823 114 9e-21
seq7818 111 1e-19
seq7858 105 5e-18
seq7764 96.9 2e-15
seq7865 84.2 2e-11
seq9 82.4 5e-11
>seq7846
Length=12828309
Score = 138 bits (152), Expect = 8e-28
Identities = 169/228 (74%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170
|| || |||| | || |||| ||| || ||| |||||| ||||||||||| || |
Sbjct 9163009 CCTCCCCTCAAGCGCAGGACCAAGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCTGAC 9163068
Query 44171 AGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGC 44230
|| |||| |||| |||||||| ||||||||||||||||| | |||||| || | ||
Sbjct 9163069 AGGGTGCGCCCGTCCTCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCGGGGGGG 9163128
Query 44231 ACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCAC 44289
| || || || ||| |||||| || | | |||| | |||||||| || |||||
Sbjct 9163129 ATGCCCTCTTTGTCCTGGATCTTC-GCCTTGACGTTCTCGATGGTGTCACTGGGCTCCAC 9163187
Query 44290 CTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
||||| || || ||||| || || | ||||||||||||||| |||||
Sbjct 9163188 CTCCAGGGTGATGGTCTTACCGGTCAAGGTCTTCACGAAGATCTGCAT 9163235
>seq7828
Length=21597463
Score = 132 bits (146), Expect = 3e-26
Identities = 160/218 (73%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 44120 AGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGC 44179
||||||||||| || ||||| ||| ||||||||| |||||||| || | | | ||
Sbjct 14213369 AGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGGACGT 14213428
Query 44180 TCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCC 44239
| || ||||| ||||| || |||||||||| | ||||||||| | ||| | ||||||
Sbjct 14213429 CCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTCTGCTGATCAGGAGGAATTCCTTCC 14213488
Query 44240 TTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTA 44299
|| | | ||||| ||| | || |||| || || | || ||| ||||| | ||
Sbjct 14213489 TTATTCTGAATCTTGGCCTTTATATTTTCTATTGTATCCGAGGGTTCAACCTCGAGAGTG 14213548
Query 44300 ATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| ||||| ||||| ||||| |||||||| || |||||
Sbjct 14213549 ATGGTCTTCCCCGTAAGGGTTTTCACGAAAATCTGCAT 14213586
>seq7857
Length=43258702
Score = 118 bits (130), Expect = 8e-22
Identities = 157/218 (72%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 44120 AGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGC 44179
||||| ||||| || ||||| ||| ||||||||| ||||||| || | || |||
Sbjct 24178172 AGTCTTAACACAAGATGAAGAGTGGACTCCTTTTGAGTGTTGTAGTCAGACAGAGTGCGT 24178113
Query 44180 TCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCC 44239
| || ||||| ||||| || ||||||||||| | ||||||||| | ||| | ||||||
Sbjct 24178112 CCATCTTCCAGTTGCTTGCCAGCAAAGATCAATCTCTGCTGATCAGGAGGAATTCCTTCC 24178053
Query 44240 TTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTA 44299
|| ||| ||||| ||| | || ||| || || | || ||| |||| | ||
Sbjct 24178052 TTATCCTGAATCTTGGCCTTTACATTTTGTATTGTATCCGAGGGTTCAGCCTCGAGAGTG 24177993
Query 44300 ATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| ||||| ||| | || || |||||||| || |||||
Sbjct 24177992 ATGGTCTTCCCCATAAGAGTTTTCACGAAAATCTGCAT 24177955
Score = 105 bits (116), Expect = 5e-18
Identities = 162/231 (70%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| || |||||||| || |||||||| || || ||| || |||||||| |||||
Sbjct 31543669 CATGCCACCTCTCAGGTGCAGAACCAGGTGCAGGGTCGACTCTTTCTGGATGTTATAATC 31543728
Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
| || ||| | || ||||||||||| || ||||| || | | |||||| || |
Sbjct 31543729 AGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAAATGAGCCTCTGCTGGTCAGG 31543788
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286
|| | || || || || ||||| ||||| || | ||| |||| || ||
Sbjct 31543789 GGGGATGCCCTCTTTATCTTGGATCTTGGCCTTCACATTTTCGATGATGTCACTGGGCTC 31543848
Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|||||||| | || ||||| || || ||||||||||||||||| |||||
Sbjct 31543849 CACCTCCAGGGGGATGGTCTTGCCGGTTAGGGTCTTCACGAAGATCTGCAT 31543899
Score = 104 bits (114), Expect = 2e-17
Identities = 149/210 (71%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|||||||| || || ||| || ||||| |||||||| | || ||| | || |||
Sbjct 31543463 ACCAGGTGGAGAGTTGACTCTTTCTGGATATTGTAATCAGAAAGAGTGCGGCCATCTTCC 31543522
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
| |||||| | ||||||||| | | |||||| || | || | || || || |
Sbjct 31543523 ATCTGCTTGCTGGCAAAGATAAGCCTCTGCTGGTCAGGGGGGATGCCCTCTTTATATTGG 31543582
Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308
|| ||| ||||| || | |||||||| || |||||||||| || || |||||
Sbjct 31543583 ATATTCGCCTTCACATTTTCAATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTG 31543642
Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCATG 44338
|| || ||||||||||||||||| ||||||
Sbjct 31543643 CCGGTTAGGGTCTTCACGAAGATCTGCATG 31543672
>seq7823
Length=12955506
Score = 114 bits (126), Expect = 9e-21
Identities = 162/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170
|| || ||||| | | |||||||| || || ||| || |||||||||||||| |
Sbjct 3355552 CCACCCCTCAGACGGAGAACCAGGTGGAGAGTTGACTCTTTCTGGATGTTGTAATCAGAA 3355493
Query 44171 AGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGC 44230
|| ||| | || ||||||||||| || ||||| || | | |||||| || | ||
Sbjct 3355492 AGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAAATGAGCCTCTGCTGGTCAGGGGGG 3355433
Query 44231 ACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACC 44290
| || || || || ||||| ||||| || | |||||||| || ||||||
Sbjct 3355432 ATGCCCTCTTTATCTTGGATCTTGGCCTTCACGTTTTCGATGGTGTCACTGGGCTCCACC 3355373
Query 44291 TCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338
|||| || || ||||| || || ||||||||||||||||| ||||||
Sbjct 3355372 TCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCATG 3355325
Score = 98.7 bits (108), Expect = 7e-16
Identities = 165/241 (68%), Gaps = 10/241 (4%)
Strand=Plus/Minus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| || || ||||| | || |||||||| || || ||| || ||||||||||||||
Sbjct 3355328 CATGCCACCCCTCAGGCGCAGGACCAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAATC 3355269
Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
| || ||| | || ||||||||||| || |||||||| | | |||||| || |
Sbjct 3355268 AGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGG 3355209
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286
|| | || || || || ||||| ||||| || | |||||||| || ||
Sbjct 3355208 GGGGATGCCCTCTTTATCTTGGATCTTGGCCTTCACATTTTCGATGGTGTCACTGGGCTC 3355149
Query 44287 CACCTCCACCGTAATCGTCTTTCCC----------GTGAGGGTCTTCACGAAGATTTGCA 44336
|||||||| || || ||||| || || | ||||||||||||||| ||||
Sbjct 3355148 CACCTCCAGGGTGATGGTCTTGCCNNNNNNNNNNAGTCAAGGTCTTCACGAAGATCTGCA 3355089
Query 44337 T 44337
|
Sbjct 3355088 T 3355088
>seq7818
Length=84771923
Score = 111 bits (122), Expect = 1e-19
Identities = 160/221 (72%), Gaps = 6/221 (3%)
Strand=Plus/Minus
Query 44120 AGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA-ATCGGCGAGTTGGCG 44178
||||||||||| || ||||| ||| ||||||||| |||||||| || | | | | ||
Sbjct 26785806 AGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGATGGACAAAGT-ACG 26785748
Query 44179 CTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTC 44238
|| || |||| ||||| || |||||||||| | ||||||||| |||| | ||||
Sbjct 26785747 TTCATCTCCCAGTTGCTTGCCAGCAAAGATCAGTCTCTGCTGATCACAAGGAATTTCTTC 26785688
Query 44239 CTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACC 44296
||| ||| ||||| ||| || ||| || | || | | || ||| ||||| |
Sbjct 26785687 CTTATCCTGAATCTTGACCTTTGCATTGT--CTGTTGTAGCCGAGGGTTCAACCTCAAGA 26785630
Query 44297 GTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| || ||||| || || ||||| |||||||| || |||||
Sbjct 26785629 GTGATAGTCTTCCCGGTAAGGGTTTTCACGAAAATCTGCAT 26785589
>seq7858
Length=29646629
Score = 105 bits (116), Expect = 5e-18
Identities = 151/210 (72%), Gaps = 2/210 (1%)
Strand=Plus/Plus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
||||||||| | || ||| || |||||||||||||| | || ||| | || |||
Sbjct 23743194 ACCAGGTGA-GAGTCGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTCC 23743252
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTT-TCCGT 44247
|||||||| | ||||||||| | | || ||| || | || | || |||||| |||
Sbjct 23743253 AGCTGCTTGCTGGCAAAGATGAGCCTCTCCTGGTCAGGGGGGATGCCCTCCTTTATCCTG 23743312
Query 44248 TATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307
||||| ||||| || | |||||||| || |||||||||| || || |||||
Sbjct 23743313 GATCTTGGCCTTCACATTTTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTT 23743372
Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
| || |||||||||| |||||| |||||
Sbjct 23743373 GCTGGTCAGGGTCTTCATGAAGATCTGCAT 23743402
Score = 104 bits (114), Expect = 2e-17
Identities = 153/217 (71%), Gaps = 0/217 (0%)
Strand=Plus/Plus
Query 44120 AGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGC 44179
||||||||||| || ||||| || ||||||||| |||||||| || | | ||
Sbjct 12424744 AGTCTCAACACAAGATGAAGAGTAGACTCCTTTTGAATGTTGTAGTCAGACAAAGTGCAT 12424803
Query 44180 TCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCC 44239
| | ||||| ||||| || |||| ||||| | ||||||||| | ||| | ||||||
Sbjct 12424804 CCATTTTCCAGTTGCTTGCCAGCAACGATCAGTCTCTGCTGATCAGGAGGAATTCCTTCC 12424863
Query 44240 TTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTA 44299
|| ||| ||||| || | || |||| || || | || ||| ||| | ||
Sbjct 12424864 TTATCCTGAATCTTGGCCTGTACATTTTCTATTGTATCCGAGGGTTCAGGCTCGAGGGTG 12424923
Query 44300 ATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCA 44336
|| ||||| ||||||||||| |||| ||| || ||||
Sbjct 12424924 ATGGTCTTCCCCGTGAGGGTTTTCAGGAAAATCTGCA 12424960
>seq7764
Length=47977530
Score = 96.9 bits (106), Expect = 2e-15
Identities = 156/220 (71%), Gaps = 6/220 (3%)
Strand=Plus/Plus
Query 44120 AGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAAT--CGGCGAGTTGGC 44177
||||||||||| || ||||| ||| ||||||||| ||| |||| | | |||| |
Sbjct 26988208 AGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGCTGTAGTCACACAAAGTTTG- 26988266
Query 44178 GCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTT 44237
|| ||| ||||| ||||| || | |||||| | ||||||||| | ||| | ||||
Sbjct 26988267 TCT-GTCTTCCAGTTGCTTGCCAGTGAAGATC--AGTCTGCTGATCAGGAGGAATTCCTT 26988323
Query 44238 CCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCG 44297
|||| ||| ||||| ||| | || ||| || | | |||||| ||||| | |
Sbjct 26988324 CCTTATCCTGGATCTTGGCCTTTACATTTTCTACTGTACCTGAGGATTCAACCTCGAGAG 26988383
Query 44298 TAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
| || ||||| ||| | ||||| ||||| || || |||||
Sbjct 26988384 TGATGGTCTTCCCCATAAGGGTTTTCACAAAAATCTGCAT 26988423
>seq7865
Length=68117122
Score = 84.2 bits (92), Expect = 2e-11
Identities = 149/211 (71%), Gaps = 6/211 (3%)
Strand=Plus/Minus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|||||||| || ||| | | || |||||||||||||| | | || || | || |||
Sbjct 16996664 ACCAGGTGCAGAGTGGACCCTTTCTGGATGTTGTAATCAGAAAAGTGAGGC-CATCTTCC 16996606
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCAC-ACCTTCCTTTTCCGT 44247
|||||||| || |||||||| | | |||||| || || || || ||||| || ||
Sbjct 16996605 AGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGAGGGTACTGCCTTCTTTATCTTG 16996546
Query 44248 TATCTTCTGCTTCAATGTTCCT-ATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306
||||| |||| | ||| | |||||||| || ||||||||| | || || ||||
Sbjct 16996545 GATCTTAGCCTTC-ACATTCTTGATGGTGTCAATGGGTTCCACCTCTAGAGTGATAGTCT 16996487
Query 44307 TTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
| | || | ||| |||| || || |||||
Sbjct 16996486 TGCTGGTCA--GTCCTCACAAACATCTGCAT 16996458
>seq9
Length=2205763
Score = 82.4 bits (90), Expect = 5e-11
Identities = 148/213 (69%), Gaps = 4/213 (2%)
Strand=Plus/Plus
Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187
||||| ||| || ||| ||| || ||||| || || || | || || | || ||
Sbjct 1749342 CACCAAGTGCAGGGTGGACTCTTTCTGGATATTATAGTCTGACAGAGTACGGCCATCTTC 1749401
Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247
|||||| || || ||||| | || ||||||||| || | || | || ||||| ||
Sbjct 1749402 CAGCTGTTTGCCCGCAAAAACCAGACGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCTTG 1749461
Query 44248 TATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTC--CACCTCCACCGTAATCGT 44304
|| || |||| | ||| | |||||||| || || |||||| | || || ||
Sbjct 1749462 GATTTTG-GCTTTGACATTCTCAATGGTGTCACTGGGCTCGACACCTCAAGGGTGATGGT 1749520
Query 44305 CTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
||| ||||| ||||||||||| ||||| |||||
Sbjct 1749521 CTTGCCCGTCAGGGTCTTCACAAAGATCTGCAT 1749553
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 359955862521024
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |