Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neomonachus_20schauinslandi_20[genbank_20GCA_5F002201575.1_202017- 06-20] 7,872 sequences; 2,400,917,536 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq7846 138 8e-28 seq7828 132 3e-26 seq7857 118 8e-22 seq7823 114 9e-21 seq7818 111 1e-19 seq7858 105 5e-18 seq7764 96.9 2e-15 seq7865 84.2 2e-11 seq9 82.4 5e-11 >seq7846 Length=12828309 Score = 138 bits (152), Expect = 8e-28 Identities = 169/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170 || || |||| | || |||| ||| || ||| |||||| ||||||||||| || | Sbjct 9163009 CCTCCCCTCAAGCGCAGGACCAAGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCTGAC 9163068 Query 44171 AGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGC 44230 || |||| |||| |||||||| ||||||||||||||||| | |||||| || | || Sbjct 9163069 AGGGTGCGCCCGTCCTCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCGGGGGGG 9163128 Query 44231 ACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCAC 44289 | || || || ||| |||||| || | | |||| | |||||||| || ||||| Sbjct 9163129 ATGCCCTCTTTGTCCTGGATCTTC-GCCTTGACGTTCTCGATGGTGTCACTGGGCTCCAC 9163187 Query 44290 CTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||||| || || ||||| || || | ||||||||||||||| ||||| Sbjct 9163188 CTCCAGGGTGATGGTCTTACCGGTCAAGGTCTTCACGAAGATCTGCAT 9163235 >seq7828 Length=21597463 Score = 132 bits (146), Expect = 3e-26 Identities = 160/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 44120 AGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGC 44179 ||||||||||| || ||||| ||| ||||||||| |||||||| || | | | || Sbjct 14213369 AGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGGACGT 14213428 Query 44180 TCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCC 44239 | || ||||| ||||| || |||||||||| | ||||||||| | ||| | |||||| Sbjct 14213429 CCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTCTGCTGATCAGGAGGAATTCCTTCC 14213488 Query 44240 TTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTA 44299 || | | ||||| ||| | || |||| || || | || ||| ||||| | || Sbjct 14213489 TTATTCTGAATCTTGGCCTTTATATTTTCTATTGTATCCGAGGGTTCAACCTCGAGAGTG 14213548 Query 44300 ATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || ||||| ||||| ||||| |||||||| || ||||| Sbjct 14213549 ATGGTCTTCCCCGTAAGGGTTTTCACGAAAATCTGCAT 14213586 >seq7857 Length=43258702 Score = 118 bits (130), Expect = 8e-22 Identities = 157/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 44120 AGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGC 44179 ||||| ||||| || ||||| ||| ||||||||| ||||||| || | || ||| Sbjct 24178172 AGTCTTAACACAAGATGAAGAGTGGACTCCTTTTGAGTGTTGTAGTCAGACAGAGTGCGT 24178113 Query 44180 TCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCC 44239 | || ||||| ||||| || ||||||||||| | ||||||||| | ||| | |||||| Sbjct 24178112 CCATCTTCCAGTTGCTTGCCAGCAAAGATCAATCTCTGCTGATCAGGAGGAATTCCTTCC 24178053 Query 44240 TTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTA 44299 || ||| ||||| ||| | || ||| || || | || ||| |||| | || Sbjct 24178052 TTATCCTGAATCTTGGCCTTTACATTTTGTATTGTATCCGAGGGTTCAGCCTCGAGAGTG 24177993 Query 44300 ATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || ||||| ||| | || || |||||||| || ||||| Sbjct 24177992 ATGGTCTTCCCCATAAGAGTTTTCACGAAAATCTGCAT 24177955 Score = 105 bits (116), Expect = 5e-18 Identities = 162/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || |||||||| || |||||||| || || ||| || |||||||| ||||| Sbjct 31543669 CATGCCACCTCTCAGGTGCAGAACCAGGTGCAGGGTCGACTCTTTCTGGATGTTATAATC 31543728 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 | || ||| | || ||||||||||| || ||||| || | | |||||| || | Sbjct 31543729 AGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAAATGAGCCTCTGCTGGTCAGG 31543788 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286 || | || || || || ||||| ||||| || | ||| |||| || || Sbjct 31543789 GGGGATGCCCTCTTTATCTTGGATCTTGGCCTTCACATTTTCGATGATGTCACTGGGCTC 31543848 Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 |||||||| | || ||||| || || ||||||||||||||||| ||||| Sbjct 31543849 CACCTCCAGGGGGATGGTCTTGCCGGTTAGGGTCTTCACGAAGATCTGCAT 31543899 Score = 104 bits (114), Expect = 2e-17 Identities = 149/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 |||||||| || || ||| || ||||| |||||||| | || ||| | || ||| Sbjct 31543463 ACCAGGTGGAGAGTTGACTCTTTCTGGATATTGTAATCAGAAAGAGTGCGGCCATCTTCC 31543522 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 | |||||| | ||||||||| | | |||||| || | || | || || || | Sbjct 31543523 ATCTGCTTGCTGGCAAAGATAAGCCTCTGCTGGTCAGGGGGGATGCCCTCTTTATATTGG 31543582 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 || ||| ||||| || | |||||||| || |||||||||| || || ||||| Sbjct 31543583 ATATTCGCCTTCACATTTTCAATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTG 31543642 Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 || || ||||||||||||||||| |||||| Sbjct 31543643 CCGGTTAGGGTCTTCACGAAGATCTGCATG 31543672 >seq7823 Length=12955506 Score = 114 bits (126), Expect = 9e-21 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170 || || ||||| | | |||||||| || || ||| || |||||||||||||| | Sbjct 3355552 CCACCCCTCAGACGGAGAACCAGGTGGAGAGTTGACTCTTTCTGGATGTTGTAATCAGAA 3355493 Query 44171 AGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGC 44230 || ||| | || ||||||||||| || ||||| || | | |||||| || | || Sbjct 3355492 AGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAAATGAGCCTCTGCTGGTCAGGGGGG 3355433 Query 44231 ACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACC 44290 | || || || || ||||| ||||| || | |||||||| || |||||| Sbjct 3355432 ATGCCCTCTTTATCTTGGATCTTGGCCTTCACGTTTTCGATGGTGTCACTGGGCTCCACC 3355373 Query 44291 TCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 |||| || || ||||| || || ||||||||||||||||| |||||| Sbjct 3355372 TCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCATG 3355325 Score = 98.7 bits (108), Expect = 7e-16 Identities = 165/241 (68%), Gaps = 10/241 (4%) Strand=Plus/Minus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || || ||||| | || |||||||| || || ||| || |||||||||||||| Sbjct 3355328 CATGCCACCCCTCAGGCGCAGGACCAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAATC 3355269 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226 | || ||| | || ||||||||||| || |||||||| | | |||||| || | Sbjct 3355268 AGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGG 3355209 Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286 || | || || || || ||||| ||||| || | |||||||| || || Sbjct 3355208 GGGGATGCCCTCTTTATCTTGGATCTTGGCCTTCACATTTTCGATGGTGTCACTGGGCTC 3355149 Query 44287 CACCTCCACCGTAATCGTCTTTCCC----------GTGAGGGTCTTCACGAAGATTTGCA 44336 |||||||| || || ||||| || || | ||||||||||||||| |||| Sbjct 3355148 CACCTCCAGGGTGATGGTCTTGCCNNNNNNNNNNAGTCAAGGTCTTCACGAAGATCTGCA 3355089 Query 44337 T 44337 | Sbjct 3355088 T 3355088 >seq7818 Length=84771923 Score = 111 bits (122), Expect = 1e-19 Identities = 160/221 (72%), Gaps = 6/221 (3%) Strand=Plus/Minus Query 44120 AGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA-ATCGGCGAGTTGGCG 44178 ||||||||||| || ||||| ||| ||||||||| |||||||| || | | | | || Sbjct 26785806 AGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGATGGACAAAGT-ACG 26785748 Query 44179 CTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTC 44238 || || |||| ||||| || |||||||||| | ||||||||| |||| | |||| Sbjct 26785747 TTCATCTCCCAGTTGCTTGCCAGCAAAGATCAGTCTCTGCTGATCACAAGGAATTTCTTC 26785688 Query 44239 CTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACC 44296 ||| ||| ||||| ||| || ||| || | || | | || ||| ||||| | Sbjct 26785687 CTTATCCTGAATCTTGACCTTTGCATTGT--CTGTTGTAGCCGAGGGTTCAACCTCAAGA 26785630 Query 44297 GTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || ||||| || || ||||| |||||||| || ||||| Sbjct 26785629 GTGATAGTCTTCCCGGTAAGGGTTTTCACGAAAATCTGCAT 26785589 >seq7858 Length=29646629 Score = 105 bits (116), Expect = 5e-18 Identities = 151/210 (72%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 ||||||||| | || ||| || |||||||||||||| | || ||| | || ||| Sbjct 23743194 ACCAGGTGA-GAGTCGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTCC 23743252 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTT-TCCGT 44247 |||||||| | ||||||||| | | || ||| || | || | || |||||| ||| Sbjct 23743253 AGCTGCTTGCTGGCAAAGATGAGCCTCTCCTGGTCAGGGGGGATGCCCTCCTTTATCCTG 23743312 Query 44248 TATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307 ||||| ||||| || | |||||||| || |||||||||| || || ||||| Sbjct 23743313 GATCTTGGCCTTCACATTTTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTT 23743372 Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 | || |||||||||| |||||| ||||| Sbjct 23743373 GCTGGTCAGGGTCTTCATGAAGATCTGCAT 23743402 Score = 104 bits (114), Expect = 2e-17 Identities = 153/217 (71%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 44120 AGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGC 44179 ||||||||||| || ||||| || ||||||||| |||||||| || | | || Sbjct 12424744 AGTCTCAACACAAGATGAAGAGTAGACTCCTTTTGAATGTTGTAGTCAGACAAAGTGCAT 12424803 Query 44180 TCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCC 44239 | | ||||| ||||| || |||| ||||| | ||||||||| | ||| | |||||| Sbjct 12424804 CCATTTTCCAGTTGCTTGCCAGCAACGATCAGTCTCTGCTGATCAGGAGGAATTCCTTCC 12424863 Query 44240 TTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTA 44299 || ||| ||||| || | || |||| || || | || ||| ||| | || Sbjct 12424864 TTATCCTGAATCTTGGCCTGTACATTTTCTATTGTATCCGAGGGTTCAGGCTCGAGGGTG 12424923 Query 44300 ATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCA 44336 || ||||| ||||||||||| |||| ||| || |||| Sbjct 12424924 ATGGTCTTCCCCGTGAGGGTTTTCAGGAAAATCTGCA 12424960 >seq7764 Length=47977530 Score = 96.9 bits (106), Expect = 2e-15 Identities = 156/220 (71%), Gaps = 6/220 (3%) Strand=Plus/Plus Query 44120 AGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAAT--CGGCGAGTTGGC 44177 ||||||||||| || ||||| ||| ||||||||| ||| |||| | | |||| | Sbjct 26988208 AGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGCTGTAGTCACACAAAGTTTG- 26988266 Query 44178 GCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTT 44237 || ||| ||||| ||||| || | |||||| | ||||||||| | ||| | |||| Sbjct 26988267 TCT-GTCTTCCAGTTGCTTGCCAGTGAAGATC--AGTCTGCTGATCAGGAGGAATTCCTT 26988323 Query 44238 CCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCG 44297 |||| ||| ||||| ||| | || ||| || | | |||||| ||||| | | Sbjct 26988324 CCTTATCCTGGATCTTGGCCTTTACATTTTCTACTGTACCTGAGGATTCAACCTCGAGAG 26988383 Query 44298 TAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 | || ||||| ||| | ||||| ||||| || || ||||| Sbjct 26988384 TGATGGTCTTCCCCATAAGGGTTTTCACAAAAATCTGCAT 26988423 >seq7865 Length=68117122 Score = 84.2 bits (92), Expect = 2e-11 Identities = 149/211 (71%), Gaps = 6/211 (3%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 |||||||| || ||| | | || |||||||||||||| | | || || | || ||| Sbjct 16996664 ACCAGGTGCAGAGTGGACCCTTTCTGGATGTTGTAATCAGAAAAGTGAGGC-CATCTTCC 16996606 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCAC-ACCTTCCTTTTCCGT 44247 |||||||| || |||||||| | | |||||| || || || || ||||| || || Sbjct 16996605 AGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGAGGGTACTGCCTTCTTTATCTTG 16996546 Query 44248 TATCTTCTGCTTCAATGTTCCT-ATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306 ||||| |||| | ||| | |||||||| || ||||||||| | || || |||| Sbjct 16996545 GATCTTAGCCTTC-ACATTCTTGATGGTGTCAATGGGTTCCACCTCTAGAGTGATAGTCT 16996487 Query 44307 TTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 | | || | ||| |||| || || ||||| Sbjct 16996486 TGCTGGTCA--GTCCTCACAAACATCTGCAT 16996458 >seq9 Length=2205763 Score = 82.4 bits (90), Expect = 5e-11 Identities = 148/213 (69%), Gaps = 4/213 (2%) Strand=Plus/Plus Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187 ||||| ||| || ||| ||| || ||||| || || || | || || | || || Sbjct 1749342 CACCAAGTGCAGGGTGGACTCTTTCTGGATATTATAGTCTGACAGAGTACGGCCATCTTC 1749401 Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247 |||||| || || ||||| | || ||||||||| || | || | || ||||| || Sbjct 1749402 CAGCTGTTTGCCCGCAAAAACCAGACGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCTTG 1749461 Query 44248 TATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTC--CACCTCCACCGTAATCGT 44304 || || |||| | ||| | |||||||| || || |||||| | || || || Sbjct 1749462 GATTTTG-GCTTTGACATTCTCAATGGTGTCACTGGGCTCGACACCTCAAGGGTGATGGT 1749520 Query 44305 CTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||| ||||| ||||||||||| ||||| ||||| Sbjct 1749521 CTTGCCCGTCAGGGTCTTCACAAAGATCTGCAT 1749553 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359955862521024