Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Neomonachus_20schauinslandi_20[genbank_20GCA_5F002201575.1_202017-
06-20] 7,872 sequences; 2,400,917,536 total letters
Query= NC_033176.1
Length=224064
Score E
Sequences producing significant alignments: (Bits) Value
seq7759 163 4e-35
seq7806 134 2e-26
>seq7759
Length=36627259
Score = 163 bits (180), Expect = 4e-35
Identities = 182/243 (75%), Gaps = 0/243 (0%)
Strand=Plus/Plus
Query 9244 ATGAGTCGAGTGGTCTGGAACAGTTGCTCGTCACTCCATTCTGGATGTTCTTGTTTCAGA 9303
||||||| | |||||||| || |||| ||| ||| |||||||| || ||||| ||
Sbjct 19738515 ATGAGTCTGCTCGTCTGGAATAGCCGCTCATCATCCCACTCTGGATGCTCCTGTTTAAGC 19738574
Query 9304 ACATCGCACACCCTGTTGTGTTCCCTGAGCCAGATAGTGGCGTACATCATGAGCCCAGGT 9363
||||| || || ||||||||||||| ||||| || |||||||||||||| || |||||
Sbjct 19738575 ACATCACAGACTCTGTTGTGTTCCCGTAGCCAAATTGTGGCGTACATCATCAGACCAGGC 19738634
Query 9364 ACCAGGCCAAAAGCCTCTTGACCGACAGCCAGACGCATGTTTTCGGGCACTTCGGGAGGA 9423
||||| || || | || || || ||||| | || | || ||| || | | ||| ||
Sbjct 19738635 ACCAGCCCGAAGACTTCCTGGCCCACAGCAAACCGTAGGTGTTCAGGAATATGGGGTGGG 19738694
Query 9424 TAGATCATGTGCACCTGGACGTCTTTGACCGAGGGGGGATACATTTCACCGTCAATCATC 9483
|||||||| | |||||| |||||||| | ||| ||||||| || || ||||| | |
Sbjct 19738695 TAGATCATCTCCACCTGAGTATCTTTGACTGTGGGAGGATACACCTCTCCATCAATTACC 19738754
Query 9484 TGA 9486
|||
Sbjct 19738755 TGA 19738757
Score = 161 bits (178), Expect = 1e-34
Identities = 218/304 (72%), Gaps = 0/304 (0%)
Strand=Plus/Plus
Query 8283 GAACTCGGAACGCGGCCAACGGACACCCCTTGACGTTGCTACAGACTAGAGACTGAATAG 8342
|||| | |||||| | || ||||| ||||| ||||| | |||| ||||||||||| |
Sbjct 19736886 GAACACTGAACGCAGTAAAAGGACAGCCCTTCACGTTATTGCAGATGAGAGACTGAATTG 19736945
Query 8343 TTGCGCTCTTGACGATCCCGAACCCCACGTCTCCGCCGAAGGTGCTGGGCTTCCAGTACC 8402
|| | |||| ||| || || || ||||| || || ||||| |||||||||||
Sbjct 19736946 AGGCAGTGTTGATGATTTTAAAGCCTACTTCTCCACCAAAAGTGCTAGGCTTCCAGTAGT 19737005
Query 8403 CCGGGGAGCAGATGACGTTCGCCATGAGGCCTTTGAGGGAGAACGGAGCCCCCAACTCGA 8462
| || || |||||| || |||| || ||||| | |||||| || || |||| || |
Sbjct 19737006 CAGGTGAACAGATGGGATTACCCATAAGTCCTTTCAAGGAGAATGGCGCTCCCATTTCTA 19737065
Query 8463 GAATGCTCTCACCGAAGATGGCGTTGGGACGGGGCTTTTCCACCAAGAATCCGGTGTACA 8522
||| ||||||| |||||||| | ||||| |||||||| | || || ||| ||||
Sbjct 19737066 CCATGGTCTCACCAAAGATGGCATCTGGACGAGGCTTTTCTAGCAGGAGGGCGGGATACA 19737125
Query 8523 GCTCCACAGCCTCGACGTCTCCGTAAAGGGCCCTGAGTTCGGCAGCGATCTCCTTTTCTC 8582
| |||| || || | || || ||||||||| | | ||||| || ||||| ||||
Sbjct 19737126 GTTCCATGGCATCAATATCACCATAAAGGGCCTCTAACCCCGCAGCCATTTCCTTCTCTC 19737185
Query 8583 CTGT 8586
||||
Sbjct 19737186 CTGT 19737189
Score = 134 bits (148), Expect = 2e-26
Identities = 151/202 (75%), Gaps = 0/202 (0%)
Strand=Plus/Plus
Query 9649 TCTTACCCCATGTCCCAGTCCTTTAGTGAAGGCCGGGCCTCGCGCCAAATCAGTCCTAAA 9708
|||||||||||| ||||||||||| ||||| || || |||||| ||| ||| | ||
Sbjct 19739569 TCTTACCCCATGGCCCAGTCCTTTGGTGAAAGCTGGCCCTCGCTTATGATCTGTCTTGAA 19739628
Query 9709 AAACTGGTGCGTGAAATGTTGGCCAAAAAAGGCAAACATTAAGTTGGTGCCCTGGGGATC 9768
|||||| || ||||| || ||| |||| || |||||||| | || ||||||||||||||
Sbjct 19739629 AAACTGATGGGTGAAGTGCTGGGCAAAGAATGCAAACATCATATTTGTGCCCTGGGGATC 19739688
Query 9769 GGGAGTGAAGGTCCTCCGAAGAAGAGTTTTTTCCACAACGTGTGCCGCATCCGGCAGCTT 9828
||| |||| | || | |||||| ||||||||||| | | | ||| || ||||
Sbjct 19739689 AGGAATGAACTTTCTTCTTAGAAGAAATTTTTCCACAATCTCTTTTGAATCGGGAAGCTC 19739748
Query 9829 TGTTTTACCTGGTGAACGAGAA 9850
| | || |||| || |||||
Sbjct 19739749 TTTCTTGCCTGAAAAATGAGAA 19739770
Score = 86.0 bits (94), Expect = 9e-12
Identities = 110/152 (72%), Gaps = 0/152 (0%)
Strand=Plus/Plus
Query 9908 TCACCTTTGACCCCAACAGGAGTTGGACAATCGTGAGGAACCGGAGGTAGAATCCTTGCG 9967
|||||||| || || | || |||||||| || | || || || || ||| || |
Sbjct 19740180 TCACCTTTCACACCCATGGGTGTTGGACAGTCATCAGCCACAGGGGGAAGAGCTCTGGTA 19740239
Query 9968 TAATAGGAGAGATTGGAGAAAGCTTCCCAGCTTGGGTATTCGTAGTCCGCGTTGTATATG 10027
|||||||||||||| || || |||||||||||| || | |||||| | ||||| |
Sbjct 19740240 TAATAGGAGAGATTAGAAAAGGCTTCCCAGCTTTTATAGCCATAGTCCACATTGTAAGTT 19740299
Query 10028 GGAGGGCTGTCAATCAAATCGGATCTACCTGA 10059
|| || || |||||||||| || || ||||
Sbjct 19740300 GGTGGACTCTCAATCAAATGTGACCTGGCTGA 19740331
>seq7806
Length=37070314
Score = 134 bits (148), Expect = 2e-26
Identities = 172/237 (73%), Gaps = 0/237 (0%)
Strand=Plus/Plus
Query 8349 TCTTGACGATCCCGAACCCCACGTCTCCGCCGAAGGTGCTGGGCTTCCAGTACCCCGGGG 8408
||||||| || ||| |||| || || ||||| ||||| |||||||||||| | || |
Sbjct 10371793 TCTTGACCATATTGAAACCCATCTCACCACCGAATGTGCTCGGCTTCCAGTACTCTGGAG 10371852
Query 8409 AGCAGATGACGTTCGCCATGAGGCCTTTGAGGGAGAACGGAGCCCCCAACTCGAGAATGC 8468
|||||||| ||| | | |||||| |||||||| || |||||||| | || | || |
Sbjct 10371853 AGCAGATGGGATTCCCTAGGAGGCCCTTGAGGGAAAAGGGAGCCCCAATTTCTATCATAC 10371912
Query 8469 TCTCACCGAAGATGGCGTTGGGACGGGGCTTTTCCACCAAGAATCCGGTGTACAGCTCCA 8528
|||| || ||||||| ||| ||| || ||| |||| | | || | ||| | |||||
Sbjct 10371913 TCTCCCCAAAGATGGAGTTTGGATGGCACTTCTCCAGAAGCAGCCCCGGGTAGAACTCCA 10371972
Query 8529 CAGCCTCGACGTCTCCGTAAAGGGCCCTGAGTTCGGCAGCGATCTCCTTTTCTCCTG 8585
|| |||| || ||| || || || | ||||| ||||||||||| || ||||
Sbjct 10371973 AGGCATCGATGTGTCCATACAGCTCCTCCAACTCGGCTGCGATCTCCTTCTCCCCTG 10372029
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 716806259322880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |