Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neomonachus_20schauinslandi_20[genbank_20GCA_5F002201575.1_202017- 06-20] 7,872 sequences; 2,400,917,536 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq7767 149 2e-30 seq7823 141 2e-28 seq7828 140 8e-28 seq7858 136 1e-26 seq7857 136 1e-26 seq7846 134 3e-26 seq7818 113 1e-19 seq7782 105 2e-17 seq7750 93.3 1e-13 seq7764 86.0 2e-11 >seq7767 Length=50048226 Score = 149 bits (164), Expect = 2e-30 Identities = 162/215 (75%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || |||||||||||||| || || || || || |||||||||||||| || ||| || Sbjct 33066953 CAGATTTTCGTGAAAACCCTTACGGGGAAGACCATCACCCTCGAGGTTGATCCCTCGGAT 33066894 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || || || ||||||||||| || |||||||| ||||| || ||||| Sbjct 33066893 ACAATAGAAAATGTAAAGGCCAAGATTCAGGATAAGGAAGGAATTCCTCCTGATCAGCAG 33066834 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 |||| ||||| || || || || || ||||||||| | ||| | | || || ||| | Sbjct 33066833 AGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGCACTTTGTCTGACTACAACATT 33066774 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACT 178138 ||||| || || || || |||||||| | |||||| Sbjct 33066773 CAAAAGGAGTCTACTCTTCATCTTGTGTGGAGACT 33066739 >seq7823 Length=12955506 Score = 141 bits (156), Expect = 2e-28 Identities = 158/209 (76%), Gaps = 4/209 (2%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981 || || |||||||| || || || || || || |||||||| |||||||| || ||| Sbjct 3355329 CAGATCTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTGGAGGTGGA--GCCCAGTG 3355386 Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041 |||||||||| ||||| || ||||| || || ||||| || ||||| || ||||||| Sbjct 3355387 ACACCATCGAAAACGTGAAGGCCAAGATCCAAGATAAAGAGGGCATCCCCCCTGACCAGC 3355446 Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101 | | || || || || || || ||||| |||||||| | |||||| | ||||| ||| Sbjct 3355447 AGAGGCTCATTTTTGCAGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCTGATTACAACA 3355506 Query 178102 TCCAAAAAGAATCAACACTGCATCTTGTT 178130 |||| ||||| ||||| || || || ||| Sbjct 3355507 TCCAGAAAGAGTCAACTCTCCACCTGGTT 3355535 Score = 123 bits (136), Expect = 6e-23 Identities = 139/184 (76%), Gaps = 4/184 (2%) Strand=Plus/Plus Query 177948 GGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG--ACACCATCGAGAACGTCAAACAAA 178005 || || || |||||||| |||||||| || ||| |||||||||| || || || | Sbjct 3355125 GGCAAGACCATCACCCTGGAGGTGGA--GCCCAGTGACACCATCGAAAATGTGAAGGCCA 3355182 Query 178006 AGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAAC 178065 |||| || || ||||| || ||||| || |||||||| | || ||||| || || || | Sbjct 3355183 AGATCCAAGATAAAGAGGGCATCCCCCCTGACCAGCAGAGGCTCATCTTTGCAGGCAAGC 3355242 Query 178066 AGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCATC 178125 |||| |||||||| | |||||| | ||||| ||| |||| ||||| || || ||||| | Sbjct 3355243 AGCTGGAAGATGGCCGCACTCTTTCTGATTACAACATCCAGAAAGAGTCGACCCTGCACC 3355302 Query 178126 TTGT 178129 | || Sbjct 3355303 TGGT 3355306 >seq7828 Length=21597463 Score = 140 bits (154), Expect = 8e-28 Identities = 160/215 (74%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || |||||||||||||| || || || || || ||||| |||||||| ||| ||| || Sbjct 14213583 CAGATTTTCGTGAAAACCCTTACGGGGAAGACCATCACTCTCGAGGTTGAACCCTCGGAT 14213524 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || | || ||||||||| | || |||||||| ||||| || ||||| Sbjct 14213523 ACAATAGAAAATATAAAGGCCAAGATTCAGAATAAGGAAGGAATTCCTCCTGATCAGCAG 14213464 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 |||| ||||| || || || || || ||||||||| | || | | || || ||| | Sbjct 14213463 AGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGTCCTTTGTCTGACTACAACATT 14213404 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACT 178138 ||||| || || || || |||||||| |||||||| Sbjct 14213403 CAAAAGGAGTCCACTCTTCATCTTGTGTTGAGACT 14213369 >seq7858 Length=29646629 Score = 136 bits (150), Expect = 1e-26 Identities = 159/215 (74%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || |||||| ||||||| ||||| || || || |||||||||||| ||| ||| || Sbjct 12424958 CAGATTTTCCTGAAAACCCTCACGGGGAAGACCATCACCCTCGAGCCTGAACCCTCGGAT 12424899 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || || | ||||||||||| || |||||||| ||||| || ||||| Sbjct 12424898 ACAATAGAAAATGTACAGGCCAAGATTCAGGATAAGGAAGGAATTCCTCCTGATCAGCAG 12424839 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 |||| ||| | || || || || || ||| ||||| | ||| | | || || ||| | Sbjct 12424838 AGACTGATCGTTGCTGGCAAGCAACTGGAAAATGGATGCACTTTGTCTGACTACAACATT 12424779 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACT 178138 ||||| || || || || |||||||| |||||||| Sbjct 12424778 CAAAAGGAGTCTACTCTTCATCTTGTGTTGAGACT 12424744 Score = 123 bits (136), Expect = 6e-23 Identities = 165/224 (74%), Gaps = 9/224 (4%) Strand=Plus/Minus Query 177910 AGGTTAAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGG 177969 ||||| |||||| | || ||| |||| || || || | || || |||||||| |||| Sbjct 23743410 AGGTTGAAATGC---AGATCTTCATGAAGACCCTGACCAGCAAGACCATCACCCTGGAGG 23743354 Query 177970 TGGAAAGCTCAG--ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAA-GAAGGAA 178026 |||| || ||| |||||||||| || || || ||||| ||||| ||| || || | Sbjct 23743353 TGGA--GCCCAGTGACACCATCGAAAATGTGAAGGCCAAGATCCAGGATAAAGGAGGGCA 23743296 Query 178027 TCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTC 178086 |||| || |||||| | | || ||||| ||| | || ||||| |||||||| | |||| Sbjct 23743295 TCCCCCCTGACCAGGAGAGGCTCATCTTTGCCAGCAAGCAGCTGGAAGATGGCCGCACTC 23743236 Query 178087 TTGCCGATTATAACGTCCAAAAAGAATCAACACTGCATCTTGTT 178130 || | ||||| ||| |||| ||||| || || || || || ||| Sbjct 23743235 TTTCTGATTACAACATCCAGAAAGAGTCGACTCT-CACCTGGTT 23743193 >seq7857 Length=43258702 Score = 136 bits (150), Expect = 1e-26 Identities = 159/215 (74%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || ||||||||||||||||| | || || || ||||| ||||||| ||| ||| || Sbjct 24177958 CAGATTTTCGTGAAAACTCTTATGGGGAAGACCATCACTCTCGAGGCTGAACCCTCGGAT 24178017 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || | || || || ||||||||||| || |||||||| ||||| || ||||| Sbjct 24178018 ACAATACAAAATGTAAAGGCCAAGATTCAGGATAAGGAAGGAATTCCTCCTGATCAGCAG 24178077 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | ||||| || || || || || ||||||||| | ||||| | || || ||| Sbjct 24178078 AGATTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGCACTCTGTCTGACTACAACACT 24178137 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACT 178138 ||||| || || || || |||||||| || ||||| Sbjct 24178138 CAAAAGGAGTCCACTCTTCATCTTGTGTTAAGACT 24178172 >seq7846 Length=12828309 Score = 134 bits (148), Expect = 3e-26 Identities = 156/207 (75%), Gaps = 5/207 (2%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981 || || |||||||| || | || || || || |||||||| |||||||| || ||| Sbjct 9163232 CAGATCTTCGTGAAGACCTTGACCGGTAAGACCATCACCCTGGAGGTGGA--GCCCAGTG 9163175 Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041 ||||||||||||||||||| ||||| ||||||||||| || ||||| || ||||||| Sbjct 9163174 ACACCATCGAGAACGTCAAGGCGAAGATCCAGGACAAAGAGGGCATCCCCCCCGACCAGC 9163115 Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101 | | | ||||| ||||| |||||||| || || || | || || | || || ||| Sbjct 9163114 AGAGGTTGATCTTTGCCGGGAAACAGCTGGAGGACGGGCGCACCCTGTCAGACTACAACA 9163055 Query 178102 TCCAAAAAGAATCAACACTGCATCTTG 178128 |||| || || || || ||||| |||| Sbjct 9163054 TCCAGAAGGAGTCCACTCTGCA-CTTG 9163029 >seq7818 Length=84771923 Score = 113 bits (124), Expect = 1e-19 Identities = 162/225 (72%), Gaps = 5/225 (2%) Strand=Plus/Plus Query 177915 AAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA 177974 ||||||| | |||||||||||||| || || || || || ||||| || ||||| ||| Sbjct 26785586 AAAATGC---AGATTTTCGTGAAAACCCTTACCGGGAAGACTATCACTCTTGAGGTTGAA 26785642 Query 177975 AGCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCG 178034 ||| | || | || || | || ||||||||||| || |||| ||| ||| Sbjct 26785643 CCCTCGGCTACAACAGACAATGCAAAGGTCAAGATTCAGGATAAGGAAGAAATTCCTTGT 26785702 Query 178035 GACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGAT 178094 || ||||| |||| ||||| || || || || || | ||||| | | ||| ||| | || Sbjct 26785703 GATCAGCAGAGACTGATCTTTGCTGGCAAGCAACTGGGAGATGAACGTACT-TTGTCCAT 26785761 Query 178095 -TATAACGTCCAAAAAGAATCAACACTGCATCTTGTTTTGAGACT 178138 || ||| | ||||| || || || || |||||||| |||||||| Sbjct 26785762 CTACAACATTCAAAAGGAGTCCACTCTTCATCTTGTGTTGAGACT 26785806 >seq7782 Length=35566003 Score = 105 bits (116), Expect = 2e-17 Identities = 150/207 (72%), Gaps = 7/207 (3%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCA--G 177981 || || || ||||| || || || || || | |||||||||||||| | ||| || | Sbjct 14262706 CAGATCTTTGTGAAGACCCTGACGGGCAAGAACATCACCCTCGAGGTTG--AGCCCAGTG 14262649 Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041 ||||||| ||||| |||||| || || || ||||| || | ||||| || ||||||| Sbjct 14262648 ACACCATTGAGAATGTCAAAGCCAAAATCCAAGACAAGGAGGACATCCCGCCTGACCAGC 14262589 Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101 | || || || || || || |||||||| |||| ||| | ||||| | || ||| | Sbjct 14262588 AGCGTCTGATTTTTGCGGGCAAACAGCTGGAAGCTGGCCGTACTCTGTCAGACTATCATA 14262529 Query 178102 TCCAAAAAGAATCAACACTGCATCTTG 178128 ||| | ||| || || |||| ||||| Sbjct 14262528 TCC--AGAGAGTCCACCCTGC-TCTTG 14262505 >seq7750 Length=6501673 Score = 93.3 bits (102), Expect = 1e-13 Identities = 145/205 (71%), Gaps = 3/205 (1%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || | ||| || || || || || || ||||||||||||||||| | | ||| Sbjct 2771179 CAGATCTTTGAGAAGACCCTGACGGGCAAGACCATCACCCTCGAGGTGGAGCCCACTGAC 2771120 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||| ||||| |||||| || || |||||||| || || |||| || |||| || Sbjct 2771119 ACCACTGAGAATGTCAAAGCCAACATCCAGGACAAGGAGGGCATCCTGCCTGACCTGCTG 2771060 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 | || || | | || ||||||| |||||||| | ||| | | || || || || Sbjct 2771059 CATCTGATTTCTGTGGGCGAACAGCTGGAAGATGGCGGCACTGT--CTGACTACAATATC 2771002 Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128 || | |||||| || ||||| |||| Sbjct 2771001 CAGAGAGAATCCACCCTGCA-CTTG 2770978 >seq7764 Length=47977530 Score = 86.0 bits (94), Expect = 2e-11 Identities = 97/130 (75%), Gaps = 0/130 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || |||||||||||||| || | || || || ||||| || ||||| ||| ||| || Sbjct 36155543 CAGATTTTCGTGAAAACCCTTATGGGGAAGACCATCACTCTTGAGGTTGAACCCTCGGAT 36155484 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || || || ||||||||||| || |||||||| ||||| || |||| Sbjct 36155483 ACAATAGAAAATGTAAAGGCCAAGATTCAGGATAAGGAAGGAATTCCTCCTGATGAGCAG 36155424 Query 178044 CGACTTATCT 178053 |||| |||| Sbjct 36155423 GGACTGATCT 36155414 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203609791671168