Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Odobenus_20rosmarus_20divergens_20[refseq_20GCF_5F000321225.1_202013
-01-16] 3,893 sequences; 2,400,150,193 total letters
Query= NC_001132.2
Length=161773
Score E
Sequences producing significant alignments: (Bits) Value
seq417 187 3e-42
seq148 87.8 2e-12
>seq417
Length=2207251
Score = 187 bits (206), Expect = 3e-42
Identities = 450/673 (67%), Gaps = 16/673 (2%)
Strand=Plus/Plus
Query 16667 CCCATTCTTTGGTAATCGCTAACGCGTTTTTCGAAAAAGTTAGTTTTGCCCTCTAGAGAT 16726
||||| || || || |||| || | || | || |||||||| || || || || ||
Sbjct 863671 CCCATCCTCTGATACTCGCCTACTCTCTTCACAAAGAAGTTAGTCTTCCCTTCCAGTGAA 863730
Query 16727 ATATTCTCCATGAAATCAAAAGGATTAGTAGCT--GAAAATATTTTAGAGTACCCCAGTT 16784
||||||||||| | ||||| ||||| || ||||| || | | || || |
Sbjct 863731 ATATTCTCCATATAGTCAAATGGATTTTCTACTCCGAAAACCTTGCCAA--AACCTAGCT 863788
Query 16785 CGGCGATTAATCTATCCGCTACAAATTCTATATATTGGCACATTAATTCGCAGTTCATTC 16844
| || | || || || || || || ||||| || |||||| ||| ||||| |
Sbjct 863789 CCAGCATAAGTCGGTCTGCCACGAACTCAATATACTGCTTCATTAACATGCAATTCATCC 863848
Query 16845 CTATAAGACGT-ACCGGAAGAGCTTCCGTCAAAAATCGTTGCTCTATAACAACCGCTTCC 16903
| || | || | | || | || ||| | | |||| |||||||| ||| || |
Sbjct 863849 CAATGA-ACTTCATGGGCAAGGCCTCCTTGATGAATCCCTGCTCTATCTGAACGGCAT-- 863905
Query 16904 TTAATAATACTAGCA---ACTCGTTCCTCGGACGGTGTATGTTTAAGATGTTTAAACATC 16960
||||||| | | |||| | |||||| ||| | || || ||||| ||||||
Sbjct 863906 -TAATAATTATTTCCTTCACTCCCTGCTCGGAAGGTTTGTGGACCAGGTGTTTGAACATC 863964
Query 16961 AGACATGCGAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTC 17020
|| || || || || || ||||| ||||| |||||||| |||||||| || ||||| ||
Sbjct 863965 AGGCAGGCAAAGTCACAGTGTAAACCCTCATCTCTGCTAATAAGTTCATTGGAAAACGTG 864024
Query 17021 AACCCGGGCATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAG 17080
| || |||||| | |||||||| | ||| ||||||| | || || |||||||||
Sbjct 864025 AGGCCAGGCATCAGGCTGCGTTTCTTGAGCCAGAATATCGACTCAAAAGAACCAGAAAAG 864084
Query 17081 AATATACCCTCGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTA 17140
|| || || || || | ||||| | | | ||||| |||| || || |||||||
Sbjct 864085 AAGATTCCTTCCACAGCAGCAAAGTCCACAACCCGTTCCCCGTAGGTAGCCTCTTTGTCC 864144
Query 17141 CGAATCCATTTCTGCACCCACTCGGCTTTTTGCTTTATGCAATCCATCGTTTCTATGGCC 17200
| ||||| | |||| | || | | ||||| ||| ||| || || |||||
Sbjct 864145 CCGATCCAACGCAAGGCCCAGGCTGCCTCCTTCTTTACACAAGGCATTGTCTCCATGGCG 864204
Query 17201 TT--AAATAATTTCTCTTTTTCCTGTAGGTCGATTATATACGTATCGATGAGTAGGCTGT 17258
|| | | || ||| |||| | | | | || | || || || || ||||| || || |
Sbjct 864205 TTGAAGAGAAATTCCCTTTCTTCGGAA--TCTTTAATGTAAGTGTCAATGAGGAGACTAT 864262
Query 17259 ACATTTCGGAGTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTCCG 17318
|||| || || || ||||| ||||||| || || || || || || || |||||||| |
Sbjct 864263 ACATCTCAGAATGAATGTTTTCCATGGTAATTTGGAAGCCATAGAAACAGCGGGCTTCTG 864322
Query 17319 CTATTTGAACTTC 17331
|| ||||||||
Sbjct 864323 TAATCTGAACTTC 864335
>seq148
Length=4816872
Score = 87.8 bits (96), Expect = 2e-12
Identities = 92/121 (76%), Gaps = 0/121 (0%)
Strand=Plus/Plus
Query 16986 CCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCATCTTTCCTCGTTTCT 17045
|||| |||||||| |||||||| || ||||| || | || |||||| || |||||||
Sbjct 2362149 CCTCATCTCTGCTAATAAGTTCATTGGAAAAGGTGAGGCCAGGCATCAGGCCGCGTTTCT 2362208
Query 17046 TTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCTCGACGGATGCAAACG 17105
| | ||| ||||||| || || || ||||||||||| || || || || | ||||| |
Sbjct 2362209 TGAGCCAGAATATCGACGCAAAAGAACCAGAAAAGAAGATTCCTTCCACAGCAGCAAAAG 2362268
Query 17106 C 17106
|
Sbjct 2362269 C 2362269
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 517520414937240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |