Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Odobenus_20rosmarus_20divergens_20[refseq_20GCF_5F000321225.1_202013
-01-16] 3,893 sequences; 2,400,150,193 total letters
Query= NC_001350.1
Length=112930
Score E
Sequences producing significant alignments: (Bits) Value
seq698 450 1e-121
seq393 405 4e-108
seq12 264 8e-66
seq1040 194 1e-44
seq259 129 4e-25
seq537 91.5 1e-13
>seq698
Length=2098425
Score = 450 bits (498), Expect = 1e-121
Identities = 433/553 (78%), Gaps = 3/553 (1%)
Strand=Plus/Plus
Query 3968 ATTAATGATTCTTCTCATATACTTCAAATTTGTACTTAATACTTTTCTCTTCTTGCACAT 4027
|||||| ||||||||||||||||||||||||||||||||| | |||||| || || ||||
Sbjct 804006 ATTAATCATTCTTCTCATATACTTCAAATTTGTACTTAATGCCTTTCTCCTCCTGGACAT 804065
Query 4028 TAGAAAGAACACTTGGATATTCTATCAAAAGTTTGTATTTCTCTAGATCAAATTCTGGAA 4087
||||||||||| ||| |||||| || || ||||| ||||| | ||||| |||| |||
Sbjct 804066 CAGAAAGAACACCTGGGTATTCTGGCAGAATTTTGT--TTCTCCAAATCAATTTCTTGAA 804123
Query 4088 AAAAGG-TGTCACATTCAAAGTCTTGCATGATCCTAGTCACAAACAGTTTAAGATCGCAT 4146
|||| |||||| ||||| || ||| | ||||| |||||||| ||| |||||| || |
Sbjct 804124 AAAAAAATGTCACTTTCAAGTTCCTGCGTAATCCTTGTCACAAATAGTCTAAGATGGCCT 804183
Query 4147 GGATAACTCATAGCTTCTTTATACACAGAACTACCTCCAATTATCCAGACCATGTCTACT 4206
|| | |||| ||||| |||| |||||||| ||||| |||||| |||||||| |||
Sbjct 804184 GGCTTGTTCATGGCTTCCTTATGAACAGAACTGCCTCCCGCTATCCAAACCATGTCCACT 804243
Query 4207 TTATTTGCTAATTCTGGCTGTTCGGTAAGTTTTAAAGCATCATCTAAACTCTTAGCTAAA 4266
|||||||||||||||| || || ||| |||||| |||||||| | ||| || || | |
Sbjct 804244 TTATTTGCTAATTCTGATTGCTCAATAAATTTTAAGGCATCATCCAGACTTTTGGCAAGA 804303
Query 4267 AAATGAGCTCTATGTGGAAGCTCCTTTAGTTCCTTGCTGAGAACAACATTAATTCTGCCT 4326
|||||||||| |||||| | ||||| || || |||||||||| | || ||||||| |
Sbjct 804304 AAATGAGCTCCTTGTGGAGGTTCCTTGAGGTCTCTGCTGAGAACTAAATGAATTCTGTCC 804363
Query 4327 TTTAAAGGCCGGTTCTTCTCAGGAATTGAGAACCAAGTCTTTTTACCCATAATCACTAAA 4386
||||||| | ||||||| ||||| |||||||| ||||| ||||||||||||| |||
Sbjct 804364 TTTAAAGATTGATTCTTCTTGGGAATAGAGAACCATGTCTTCCTACCCATAATCACCAAA 804423
Query 4387 TTCTGTTTATCTGGTACAGAAGATGTAGTAGTCATTCTTTGGAAATGTTTAAAATCATTC 4446
||||||||| || ||| || || || || ||||||||||||||| || | ||||||
Sbjct 804424 TTCTGTTTACCTTCTACTGATGAGGTTGTGGTCATTCTTTGGAAAAACTTGCATTCATTC 804483
Query 4447 ATAAGTCTTGGCCAAGGCAAGTTACCTTGTTTGCCAATGCCCATGTTTTGAGCTACAGCA 4506
| || ||||| ||||||| || | |||||||||||||| || | | ||||
Sbjct 804484 CTGAGCGGGGGCCAGGGCAAGTCCCCGTTCTTGCCAATGCCCATATTCCGGGACGCAGCG 804543
Query 4507 ACAATGCAGTTTA 4519
| ||||||||||
Sbjct 804544 GCGATGCAGTTTA 804556
>seq393
Length=1466730
Score = 405 bits (448), Expect = 4e-108
Identities = 430/566 (76%), Gaps = 16/566 (3%)
Strand=Plus/Plus
Query 3957 AAGACATTTGTATTAATGATTCTTCTCATATACTTCAAATTTGTACTTAATACTTTTCTC 4016
|| || || | ||| || ||||||||||||||||||||||||||| ||||| | || |||
Sbjct 306549 AACACCTTCGCATTCATCATTCTTCTCATATACTTCAAATTTGTATTTAATGCCTTCCTC 306608
Query 4017 TTCTTGCACATTAGAAAGAACACTTGGATATTCTATCAAAAGTTTGTATTTCTCTAGATC 4076
|| || |||| ||||||||||| ||| | |||||| |||||||| | ||
Sbjct 306609 CTCCTGGACATCAGAAAGAACACCTGGG---------AGAAGTTTTTATTTCTCCAAATT 306659
Query 4077 AAATTCTGGAAAAAAG--GTGTCACATTCAAAGTCTTGCATGATCCTAGTCACAAACAGT 4134
|| |||||||||||| ||||||| |||||| || |||| ||||| |||||||| |||
Sbjct 306660 AATTTCTGGAAAAAAAACGTGTCACTTTCAAATTCCTGCACAATCCTTGTCACAAATAGT 306719
Query 4135 TTAAGATCGCATGGATAACTCATAGCTTCTTTATACACAGAACTACCTCCAATTATCCAG 4194
|||| | || ||| | |||| ||||| ||||| |||||||| |||| | ||||||
Sbjct 306720 CTAAGGTGGCCTGGCTTGTTCATGGCTTCCTTATAAACAGAACTGACTCCCACTATCCAA 306779
Query 4195 ACCATGTCTACTTTATTTGCTAATTCTGGCTGTTCGGTAAGTTTTAAAGCATCATCTAAA 4254
|||||||| |||||||||||||||||||| | || || |||||| |||||||| | |
Sbjct 306780 ACCATGTCCACTTTATTTGCTAATTCTGGTGGCTCAAAAACTTTTAAGGCATCATCCAGA 306839
Query 4255 CTCTTAGCTAAAAAATGAGCTCTATGTGGAAGCTCCTTTAGTTCCTTGCTGAGAACAACA 4314
|| || || | |||||||||| || || | |||| || || ||||| || | |
Sbjct 306840 CTTTTGGCAAGAAAATGAGCTTCGTGGGG--GTTCCTCAAGGTCT---CTGAGCACTAAA 306894
Query 4315 TTAATTCTGCCTTTTAAAGGCCGGTTCTTCTCAGGAATTGAGAACCAAGTCTTTTTACCC 4374
| ||||||| | |||||||| || |||||||| ||||| |||||||| ||||| |||||
Sbjct 306895 TCAATTCTGTCCTTTAAAGGTCGATTCTTCTCGGGAATAGAGAACCATGTCTTCCTACCC 306954
Query 4375 ATAATCACTAAATTCTGTTTATCTGGTACAGAAGATGTAGTAGTCATTCTTTGGAAATGT 4434
|||||||| |||||||||||| || ||| || || | || ||||||||||||||||
Sbjct 306955 ATAATCACCAAATTCTGTTTACCTTCTACTGAGGAGGATGTGGTCATTCTTTGGAAATAC 307014
Query 4435 TTAAAATCATTCATAAGTCTTGGCCAAGGCAAGTTACCTTGTTTGCCAATGCCCATGTTT 4494
|| || |||||| | | | ||||| |||| || || | |||| |||||| ||||
Sbjct 307015 TTGAACTCATTCCTGAATGAGGGCCACGGCACGTCCCCGTTCTTGCTGATGCCCCTGTTC 307074
Query 4495 TGAGCTACAGCAACAATGCAGTTTAG 4520
|||| ||||| | ||||| |||||
Sbjct 307075 TGAGACACAGCGAGGATGCAATTTAG 307100
>seq12
Length=8214359
Score = 264 bits (292), Expect = 8e-66
Identities = 382/544 (70%), Gaps = 34/544 (6%)
Strand=Plus/Plus
Query 3955 AAAAGACATTTGTATTAATGATTCTTCTCATATACTTCAAATTTGTACTTAATACTTTTC 4014
|||| || || || ||| |||||| | |||||||||||||| |||||||| | |||
Sbjct 5092214 AAAACACCTTCACATGAATCATTCTTTTTGTATACTTCAAATTTCTACTTAATGCCTTTT 5092273
Query 4015 TCTTCTTGCACATTAGAAAGAACACTTGGATATTCTATCAAAAGTTTGTATTTCTCTAGA 4074
|| || || ||| ||||||||||||||| |||||| | ||| || ||| || | | |
Sbjct 5092274 TCCTCCTGGACACCAGAAAGAACACTTGGGTATTCTGGAAGAAGCTTATATATCCCCAAA 5092333
Query 4075 TCAAATTCTGGAAAAAAGGTGTCACATTCAAAGTCTTGCATGATCCTAGTCACAAACAGT 4134
|||| |||||||||||| |||| || ||||||| |||
Sbjct 5092334 TCAATTTCTGGAAAAAATGTGTTACTTTCAAAG------------------------AGT 5092369
Query 4135 TTAAGATCGCATGGATAACTCATAGCTTCTTTATACACAGAACTACCTCCAATTATCCAG 4194
|| |||| || ||| | | | ||||| ||||| |||||||| ||||| | ||||||
Sbjct 5092370 TTGAGATGGCTTGGCTTGTTTGTGGCTTCCTTATAAACAGAACTGCCTCCCACTATCCAA 5092429
Query 4195 ACCATGTCTACTTTATTTGCTAATTCTGGCTGTTCGGTAAGTTTTAAAGCATCATCTAAA 4254
||||||||||| || |||| ||||||||| |||| |||||||||| ||||||| | |
Sbjct 5092430 ACCATGTCTACCTTCTTTGTTAATTCTGGTTGTTTAATAAGTTTTAAGGCATCATGCAGA 5092489
Query 4255 CTCTTAGCTAAAAAATGAGCTCTATGTGGAAGCTCCTTTAGTTCCTTGCTGAGAACAACA 4314
|| || |||| ||||||||| | | |||| | ||||| |||| | ||||||||
Sbjct 5092490 CTTTTGGCTAGAAAATGAGCGCCTTTTGGAGGTTCCTTGAGTTGTCTACTGAGAACTGAG 5092549
Query 4315 TTAATTCTGCCTTTTAAAGGCCGGTTCTTCTCAGGAATTGAGAACCAAGTCTTTTTACCC 4374
||||||||| | | ||||| | |||||||| |||| |||| || || || |||||
Sbjct 5092550 TTAATTCTGTCCTCCAAAGGTCTGTTCTTCTAGGGAAGAGAGAGTCATGTTTTCCTACCC 5092609
Query 4375 ATAATCACTAAATTCTGTTTATCTGGTACAGAAGATGTAGT--AGTCATTCTTTGGAAAT 4432
||||||| ||||||| | |||| || | || | ||||||||| ||||||
Sbjct 5092610 GTAATCACAAAATTCTAAT-------TACA-AAATTCTATTCCGGTCATTCTTGGGAAAT 5092661
Query 4433 GTTTAAAATCATTCATAAGTCTTGGCCAAGGCAAGTTACCTTGTTTGCCAATGCCCATGT 4492
| || |||||| | | ||||| || | ||| | | ||||| ||||||| ||
Sbjct 5092662 ACCTGAATTCATTCCTGGATGGGGGCCAGGGTAGGTTTCTGTTCTTGCCTATGCCCACGT 5092721
Query 4493 TTTG 4496
| ||
Sbjct 5092722 TCTG 5092725
>seq1040
Length=722020
Score = 194 bits (214), Expect = 1e-44
Identities = 188/242 (78%), Gaps = 0/242 (0%)
Strand=Plus/Minus
Query 26931 AGCTTTTAGTCTACATTGTGAACAATGGGAGTAACGCATGTGCAGCCTACAGTCACTAGC 26990
|||| ||| | |||| ||| |||||||| || ||||| |||||||| || | ||| |||
Sbjct 661469 AGCTCTTAAGCCACATGGTGCACAATGGGGGTGACGCAGGTGCAGCCCACGGCCACCAGC 661410
Query 26991 ATCTTCTCTAGCCTAAATGAATTAGGGCAGGGTTGATGCCCTTTGCGCACCACTAGAATC 27050
|||||||| |||| || || | |||||| | ||| | | | |||| || || |||
Sbjct 661409 ATCTTCTCCAGCCGGAAGGAGTGGGGGCAGTGCTGAGACTCCCTTCGCAGAACCAGGATC 661350
Query 27051 TCTTGTTGGATAGGGACTGAGTTCATGTGGTAGTCTACATTCCCATCAGCATTAACACAT 27110
||||| ||||| ||||| |||||||||||||| | || ||||| |||||||| |||||
Sbjct 661349 TCTTGCTGGATGGGGACAGAGTTCATGTGGTAATTTATCTTCCCTTCAGCATTGACACAG 661290
Query 27111 CCTAAGTAGCGACACTTTGCTTCCCAAATCACAGAGGGATATCTATCTTGATCTTCATTG 27170
|| |||| ||| ||||| || ||||| ||||||||||||||||| || || ||||||
Sbjct 661289 CCCAAGTGGCGGCACTTGGCCTCCCAGATCACAGAGGGATATCTCTCAGCGTCCTCATTG 661230
Query 27171 CG 27172
||
Sbjct 661229 CG 661228
>seq259
Length=3797764
Score = 129 bits (142), Expect = 4e-25
Identities = 104/126 (83%), Gaps = 0/126 (0%)
Strand=Plus/Plus
Query 4165 TTATACACAGAACTACCTCCAATTATCCAGACCATGTCTACTTTATTTGCTAATTCTGGC 4224
||||| |||||||| ||||| | || ||| |||||||| ||||||||||||||||||||
Sbjct 1123334 TTATAAACAGAACTGCCTCCTACTACCCAAACCATGTCCACTTTATTTGCTAATTCTGGT 1123393
Query 4225 TGTTCGGTAAGTTTTAAAGCATCATCTAAACTCTTAGCTAAAAAATGAGCTCTATGTGGA 4284
|| || |||||||||| |||||||| | ||| || || | ||||||||||| ||||||
Sbjct 1123394 TGCTCAATAAGTTTTAAGGCATCATCCAGACTTTTGGCAAGAAAATGAGCTCCTTGTGGA 1123453
Query 4285 AGCTCC 4290
| |||
Sbjct 1123454 GGTTCC 1123459
Score = 116 bits (128), Expect = 3e-21
Identities = 99/122 (81%), Gaps = 0/122 (0%)
Strand=Plus/Plus
Query 4045 TATTCTATCAAAAGTTTGTATTTCTCTAGATCAAATTCTGGAAAAAAGGTGTCACATTCA 4104
|| ||| || ||||||||||||||| | ||||| |||||||||||| ||||||| ||||
Sbjct 1120256 TACTCTGGCAGAAGTTTGTATTTCTCCAAATCAATTTCTGGAAAAAATGTGTCACTTTCA 1120315
Query 4105 AAGTCTTGCATGATCCTAGTCACAAACAGTTTAAGATCGCATGGATAACTCATAGCTTCT 4164
|| || ||||| ||||| |||||||| ||| |||||| || ||| | |||| |||||
Sbjct 1120316 AATTCCTGCATAATCCTTGTCACAAATAGTCTAAGATGGCCTGGTTTGTTCATGGCTTCC 1120375
Query 4165 TT 4166
||
Sbjct 1120376 TT 1120377
Score = 116 bits (128), Expect = 3e-21
Identities = 91/109 (83%), Gaps = 0/109 (0%)
Strand=Plus/Plus
Query 4290 CTTTAGTTCCTTGCTGAGAACAACATTAATTCTGCCTTTTAAAGGCCGGTTCTTCTCAGG 4349
||| || || |||||||||| | |||||||||| | |||||||| || |||||||| ||
Sbjct 1130592 CTTGAGGTCTCTGCTGAGAACTAAATTAATTCTGTCCTTTAAAGGTCGATTCTTCTCGGG 1130651
Query 4350 AATTGAGAACCAAGTCTTTTTACCCATAATCACTAAATTCTGTTTATCT 4398
||| |||||||| ||||| | ||||||||||| |||||||||||| ||
Sbjct 1130652 AATAGAGAACCATGTCTTCCTCCCCATAATCACCAAATTCTGTTTACCT 1130700
Score = 95.1 bits (104), Expect = 9e-15
Identities = 69/80 (86%), Gaps = 0/80 (0%)
Strand=Plus/Plus
Query 3968 ATTAATGATTCTTCTCATATACTTCAAATTTGTACTTAATACTTTTCTCTTCTTGCACAT 4027
|||||| |||||||||||||||||||||||||||||||| | |||||| || || ||||
Sbjct 1113366 ATTAATCGTTCTTCTCATATACTTCAAATTTGTACTTAATGCCTTTCTCCTCCTGGACAT 1113425
Query 4028 TAGAAAGAACACTTGGATAT 4047
||| ||||||| ||| |||
Sbjct 1113426 CAGATAGAACACCTGGGTAT 1113445
>seq537
Length=2461945
Score = 91.5 bits (100), Expect = 1e-13
Identities = 118/163 (72%), Gaps = 0/163 (0%)
Strand=Plus/Plus
Query 102033 CTTTATATTCTGCTCCGAAATGCCTCCACTGAAATCCATACACAGGTCCAAGATCTCCTT 102092
|||| |||||||| || ||||||||||||||||| ||||| || || || | ||| ||||
Sbjct 245824 CTTTGTATTCTGCCCCAAAATGCCTCCACTGAAAGCCATAAACTGGGCCTAAATCCCCTT 245883
Query 102093 CATCTCTGTCATAAAAACCAAGTTTATCTAAAAATGATCTAGATCCATTCGCATCCCAAA 102152
| ||||||| | || || || | || || || || ||| ||||| |||||||| |
Sbjct 245884 CTTCTCTGTTGGAGAATCCCAGGCTGTCCAAGAAGTCTCGAGACCCATTGGCATCCCAGA 245943
Query 102153 TGTGCACGCCAGCTGCTGATAGCTCTTTGCTGTCAGTAGATCC 102195
| | ||| || | || || || ||| || ||||||||
Sbjct 245944 TTTTCACTCCCTTGGAAGACAGTTCCTTGGCGTTTGTAGATCC 245986
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 361234060098143
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |