Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Odobenus_20rosmarus_20divergens_20[refseq_20GCF_5F000321225.1_202013
-01-16] 3,893 sequences; 2,400,150,193 total letters
Query= NC_001611.1
Length=185578
Score E
Sequences producing significant alignments: (Bits) Value
seq1020 343 2e-89
seq417 253 2e-62
seq1832 212 7e-50
seq3 131 2e-25
seq148 123 3e-23
seq158 120 4e-22
>seq1020
Length=850931
Score = 343 bits (380), Expect = 2e-89
Identities = 645/942 (68%), Gaps = 16/942 (2%)
Strand=Plus/Minus
Query 23784 TTTCT-TTAAAAGTCAACATCTAAAGAAAAATGATTGTCTTCTTGA---GACATAACTCC 23839
||||| ||| |||||| |||| || | |||| ||| ||| | || ||||| | |||
Sbjct 339111 TTTCTCTTAGAAGTCAGCATCCAAGGTAAAAGAATTCTCTGTTGGACTTGACATCATTCC 339052
Query 23840 CATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATAT 23899
||| | || ||||| || || | || || ||| ||||| || ||||| | ||| ||
Sbjct 339051 CATCCTCTGATATTCGCCTACTCTCTTCTC---AAAGTTAGTCTTCCCTTCCAGTGAAAT 338995
Query 23900 ATTTTCCATGAAATCGGATGGATTGGTAACATTATAGATTCTTTTAAATCCCAATTCAGA 23959
||| ||||| || || ||||||| || | | | | ||| || | ||
Sbjct 338994 ATTCTCCATAAAGTCAAATGGATTTTCTACTCTGAAAACCTTGCCAAAACCTAGCTCCAG 338935
Query 23960 AATCAATCTATCTGCGACAAACTCCATATATGTTTTCATCATTTCACAATTCATTCCTAT 24019
|| | || ||||| || ||||| ||||| ||||| | | |||||||| || ||
Sbjct 338934 CATAAGTCGGTCTGCCACGAACTCAATATACTGCTTCATTAATGTGCAATTCATCCCAAT 338875
Query 24020 AAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTAT 24079
|| || || || | ||| | || || || || || || || || || | | ||
Sbjct 338874 GAGCTTCACAGGCAAGGCCTCCGTGAGGAACTCCTGCTCTATCCGAACGGCAT---TAAT 338818
Query 24080 AATAGAT--CTT-ACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAACATCAAACA 24136
||| | ||| ||| | | || ||| | | | ||||| ||||||| ||
Sbjct 338817 AATTATTTCCTTCACTCTCTGCTCGGAAGGTTTGTGGACCAGGTGTTTGAACATCAGGCA 338758
Query 24137 TGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCC 24196
|| || || ||||||| |||||| ||||| ||| | | ||| |||||||| | ||| ||
Sbjct 338757 GGCAAAGTCACAGTGTAAACCCTCATCTCTGCTAGTAAGTTCATTGGAAAAGGCGAGGCC 338698
Query 24197 GGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAAT 24256
||||| |||||||| || || ||||| ||||| || ||||| || |||||||||| ||
Sbjct 338697 AGGCATCAGGCCACGTTTCTTGAGCCAGAATATCGATGCAAAAGAACCAGAAAAGAGGAT 338638
Query 24257 TCCTTCTACTGCCGCAAAGGCAATAAGTCTTTCTCCATA---ACCGGCGCTGTCATGTAT 24313
|||||| || || ||||| || | || | ||| || || ||| | |||| |
Sbjct 338637 TCCTTCCACAGCAGCAAAAGCCACAACCCGTTCCCCGTAGGTACCCTCTTTGTCCCCAGT 338578
Query 24314 CCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAA 24373
||| | |||||||| |||||||| |||||||||||||||||||| || || || ||
Sbjct 338577 CCAATGCAAGGCCCAATCTGCCTTCTTCTTTACACAAGGCATTGTCTCGATGGCGTTGAA 338518
Query 24374 GAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATTTC 24433
|||| | | |||| || |||||||| ||| || ||| | | ||||| ||||| ||
Sbjct 338517 GAGAAATTCCCTTTCTTTGGAATCTTTAATATAAGTGTCAGTGAGGAGACTGTACATCTC 338458
Query 24434 CGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTG 24493
||||| |||||||| ||||| | ||| || | |||||||| | || || ||||||||
Sbjct 338457 AGAATGGATGTTTTCCATGGCAAATTGGAAGTCATAGAAACAGCGGGCTTCTGTAATCTG 338398
Query 24494 TACTTCTATACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAA 24553
|||||| | ||| || || | || |||||||| || || || ||||| ||||||||
Sbjct 338397 AACTTCTTGGCTAAACCGCTCCACCAAGTTTTCATTTACGATGCCATCACTCGCTGCAAA 338338
Query 24554 AAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTATTCCAATCATT 24613
|| |||| || || |||||| ||| | || || || | || | ||| | |
Sbjct 338337 GAAAGCCAGAACGTGGGATATAAAGTATCTCTCCTCAGGCTTCAGGGATTCCCAGTGCTG 338278
Query 24614 GATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATA 24673
|| || || || | |||||| | ||| |||||||||| || ||||| || || |||||
Sbjct 338277 AATGTCCTTGGAAAGATCCACCTTTTCAGCTGTCCAAAAGGAAGCCTCAGCTTTCTTATA 338218
Query 24674 CATATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAA 24715
| | | ||| || ||| || | || || || || |||||
Sbjct 338217 CCTCTGCCAAATATCACAGTACTCGATGGGGAAGATGACAAA 338176
>seq417
Length=2207251
Score = 253 bits (280), Expect = 2e-62
Identities = 287/384 (75%), Gaps = 3/384 (1%)
Strand=Plus/Plus
Query 24120 TGTTTAAACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCG 24179
||||| ||||||| || || || || ||||||| |||||| ||||| ||||| | |||
Sbjct 863953 TGTTTGAACATCAGGCAGGCAAAGTCACAGTGTAAACCCTCATCTCTGCTAATAAGTTCA 864012
Query 24180 TTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAAT 24239
|||||||||||||| || ||||| |||| || || || ||||| ||||| ||| ||||
Sbjct 864013 TTGGAAAACGTGAGGCCAGGCATCAGGCTGCGTTTCTTGAGCCAGAATATCGACTCAAAA 864072
Query 24240 GATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTTTCTCCATA---A 24296
|| ||||||||||| |||||||| || || |||||| | | || | ||| || || |
Sbjct 864073 GAACCAGAAAAGAAGATTCCTTCCACAGCAGCAAAGTCCACAACCCGTTCCCCGTAGGTA 864132
Query 24297 CCGGCGCTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATT 24356
| | |||| ||||| ||||| | |||| ||| |||||||||||||||
Sbjct 864133 GCCTCTTTGTCCCCGATCCAACGCAAGGCCCAGGCTGCCTCCTTCTTTACACAAGGCATT 864192
Query 24357 GTCTCTATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATC 24416
||||| || || || |||||| | | |||| | |||||||| || || |||||
Sbjct 864193 GTCTCCATGGCGTTGAAGAGAAATTCCCTTTCTTCGGAATCTTTAATGTAAGTGTCAATG 864252
Query 24417 AAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACAT 24476
| ||||||||||| || |||||||||||||| |||| ||||| || || ||||||||
Sbjct 864253 AGGAGACTATACATCTCAGAATGAATGTTTTCCATGGTAATTTGGAAGCCATAGAAACAG 864312
Query 24477 CTAGCCTCGGTAATCTGTACTTCT 24500
| || || |||||||| ||||||
Sbjct 864313 CGGGCTTCTGTAATCTGAACTTCT 864336
Score = 91.5 bits (100), Expect = 2e-13
Identities = 138/194 (71%), Gaps = 2/194 (1%)
Strand=Plus/Plus
Query 24523 TTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATT 24582
||||||| || || ||| |||| | ||||| || |||| ||||| |||||| |||
Sbjct 864553 TTTCATTTACCATGCCGGCACTCGGCGCAAAGAAAGCCAGAACATGGGATATAAAGTATC 864612
Query 24583 TTTCGTCTGGTGTTAGTTTATTCCAATCATTGA-TATCTTTAGATATATCCACTTCTTCC 24641
| || || || | || ||||| ||| | || || || | ||||||||||||
Sbjct 864613 TCTCCTCAGGCTTCAGGG-ATTCCCGCGGCTGAATGTCCTTGGAAAGATCCACTTCTTCA 864671
Query 24642 ACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGAATT 24701
|||||||||| || ||||| || || |||||||| | ||| || ||||| || | ||
Sbjct 864672 GCTGTCCAAAAGGAAGCCTCAGCTTTCTTATACATCTGCCAAATATCATGGTACTCGATA 864731
Query 24702 GGAAAAATAACAAA 24715
|| || || |||||
Sbjct 864732 GGGAAGATGACAAA 864745
>seq1832
Length=302895
Score = 212 bits (234), Expect = 7e-50
Identities = 412/606 (68%), Gaps = 12/606 (2%)
Strand=Plus/Plus
Query 24120 TGTTTAAACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCG 24179
||||| ||||||| | || || || | ||||| |||||| ||||| ||||| | ||
Sbjct 206738 TGTTTGAACATCAGGTAGGCAAAGTCACGGTGTAAACCCTCATCTCTGCTAATAAGCTCA 206797
Query 24180 TTGGAAAAC-GTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAA 24238
||||||||| ||||| || ||||| |||| | || || ||||| |||| ||||| |
Sbjct 206798 TTGGAAAACAGTGAGGCCAGGCATCAGGCTGCATTTCTTGAGCCAGTATATCAACGCAGA 206857
Query 24239 TGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTTTCTCCATA--- 24295
|| ||| ||||| | |||||||| || |||||| | | || | ||| || ||
Sbjct 206858 AGAACCAAAAAAGGAGATTCCTTCCGTGGCAGCAAAGTCCACAACCCATTCCCCGTAGGT 206917
Query 24296 ACCGGCGCTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCAT 24355
| | | |||| | ||| | ||||||| |||||||| || ||||||||||
Sbjct 206918 AGCCTCTTTGTCCCCAACCCAATGCAAGGCCCAATTTGCCTTCTTCCTTCCACAAGGCAT 206977
Query 24356 TGTCTCTATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAAT 24415
|||||| || | || |||||| | | | || || ||||| | ||| || ||| |
Sbjct 206978 TGTCTCCATGGTGTTGAAGAGAAATTCCCTCTCTTTGGAATCTT--ATATAAGTGTCAGT 207035
Query 24416 CAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACA 24475
| |||||| |||| || ||||| |||||||| ||||| ||||| || || ||||||||
Sbjct 207036 GAGGAGACTACACATCTCAGAATGGATGTTTTCCATGGCAATTTGGAAGCCATAGAAACA 207095
Query 24476 TCTAGCCTCGGTAATCTGTACTTCTATACAAAATCGTTCTGCTAAATTTTCATTCACTAT 24535
| || || || ||||| || ||| | | | | || | || |||||||| |||||
Sbjct 207096 GCAGGCTTCTGTCATCTGAACCTCTTGGCCACACCACTCCACCAAGTTTTCATTTACTAT 207155
Query 24536 TCCGTCACTGGCTGCAAAAAACGCCA------ATACATGTTTTATAAAATATTTTTCGTC 24589
|| |||| || |||| || |||| || || |||||||| | | || ||
Sbjct 207156 GCCAACACTTGCCACAAAGAAAGCCAGAACGTGAACGTGGGGTATAAAATCTCTCTCCTC 207215
Query 24590 TGGTGTTAGTTTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCA 24649
|| | || | ||| | | || || || || | || ||| |||| |||||||
Sbjct 207216 AGGCTTCAGGGATTCCCAGTGCTGAATGTCCTTGGAAAGATTCACCTCTTTAGCTGTCCA 207275
Query 24650 AAATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAAT 24709
||| || ||||| || || ||| |||| | ||| | |||||||| | || || || ||
Sbjct 207276 AAAAGAAGCCTCAGCTTTCTTACACATCTGCCAAAGATCATGATACTCCATAGGGAAGAT 207335
Query 24710 AACAAA 24715
| |||
Sbjct 207336 GAGAAA 207341
>seq3
Length=9835568
Score = 131 bits (144), Expect = 2e-25
Identities = 111/137 (81%), Gaps = 0/137 (0%)
Strand=Plus/Plus
Query 53150 ACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACA 53209
|| ||||||||||| ||||| ||||| ||||| || || || |||||||| ||||| |
Sbjct 152606 ACCTGAAATTCTCCTGACAAGACTCTGCGAGTATAGATGTTGCTGGTATAAGGTTCAATG 152665
Query 53210 GACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAA 53269
|||||||||||||||| ||| ||||||||||| ||||| ||||| || || | | ||||
Sbjct 152666 GACTCATTATTTCCCAGAATCTGAGCAGTTGAAGCAGTAGGCATCGGGGCAATAAGTAAA 152725
Query 53270 CTATTTCTAAGACCGTA 53286
|| ||||| | ||| ||
Sbjct 152726 CTGTTTCTTATACCATA 152742
Score = 114 bits (126), Expect = 2e-20
Identities = 128/171 (75%), Gaps = 0/171 (0%)
Strand=Plus/Plus
Query 52875 TCCATCCGTAAAAATGCATACTTGTTAGTTTGGAATAACTCGGATCTGCTATATGGATAT 52934
|||| ||||| ||||||||||| || |||||| ||| | || || || || ||||| |
Sbjct 150104 TCCAGCCGTAGAAATGCATACTGGTGAGTTTGCCATAGTTAGGCTCAGCGATGTGGATGT 150163
Query 52935 TCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCT 52994
||| |||||| |||||||| ||||| || || || || || ||||| || | | || |
Sbjct 150164 TCAAAGATTGGCTTTGATCAATGAAAGCACCTCTTTCAGCTGCCATCTTAAGAACGGTTT 150223
Query 52995 TTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAA 53045
| |||| ||||||||| | || ||||||| | |||| | || || ||||
Sbjct 150224 TCTGTGAAATTTCCCACACGGTCTTATAAAGTTGCTTCAGGTCATCAGGAA 150274
Score = 104 bits (114), Expect = 3e-17
Identities = 137/190 (72%), Gaps = 0/190 (0%)
Strand=Plus/Plus
Query 53388 CATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGT 53447
|||| || || ||||| || | || || || || ||||| || || || || || || |
Sbjct 157356 CATAGGTTTCATATGGGCCATGCTCCTTGGCCAGGTCACAGCTGGCTTCCAAGGCTCCAT 157415
Query 53448 AATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGGAT 53507
||||||||||||| ||||||| |||||| || || ||||| | || ||||| ||||
Sbjct 157416 AATAAATGGTTTCAAAGATCTGCTTATTCAGTAGCTGGGCTTCTGGACTCTCAAAAGGAT 157475
Query 53508 AATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTC 53567
| | | |||||||| || ||||| | ||||| || || || || || || | ||| |
Sbjct 157476 ACCTCATCAGAATAAAAGCATCTGCCAGACCTTGTACCCCGATTCCAATGGGGCGATGGC 157535
Query 53568 TCTTATTAGA 53577
||||| ||
Sbjct 157536 GTTTATTTGA 157545
Score = 100 bits (110), Expect = 3e-16
Identities = 103/135 (76%), Gaps = 0/135 (0%)
Strand=Plus/Plus
Query 54025 CTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCT 54084
|| |||||||||||| |||||||| ||||||||||| || | || || || |||| |
Sbjct 162117 CTCCACTCGTTTCATGAAGAGATCTGGAATCCAAAGGGCAAAGAAAAGGTCCCTGGCACG 162176
Query 54085 ATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCA 54144
||||| || |||||||| ||||| || | ||| || ||| | | ||| || |||||||
Sbjct 162177 CTGTTCTTCCTTTCCTGTGTTCTTCTTTAAATCCAGAAACTCAAAAATGTCTAAATGCCA 162236
Query 54145 CGGTTCCAAGTATAT 54159
|| |||| ||| ||
Sbjct 162237 AGGCTCCAGGTAAAT 162251
Score = 87.8 bits (96), Expect = 2e-12
Identities = 119/166 (72%), Gaps = 0/166 (0%)
Strand=Plus/Plus
Query 54768 CACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTAGAA 54827
|||| || | ||| |||||||||||||| | || || ||||| || || || || || |
Sbjct 174955 CACTGAACACTTTCTTTGTTTCTTTGTGCAAGTTCGAGACGGCAATCCTTGCTGCCAGGA 175014
Query 54828 TGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGTCAGAGTGTCCA 54887
||||||| || || || | || || | || || ||| | || || | || ||| || |
Sbjct 175015 TGGCATAGTCAGGGTGCTTAGTCGTCAAGGTCGCAGCTGTCTCAGCAGCCAAAGTATCTA 175074
Query 54888 ATTCTACCGTTGTTACTCCATTATATATTCCTTGGATAACCTTCAT 54933
||| || || || || ||| | |||| |||||||| || |||||
Sbjct 175075 GTTCCACAGTGGTGACCCCACTGTATAAGCCTTGGATTACTTTCAT 175120
>seq148
Length=4816872
Score = 123 bits (136), Expect = 3e-23
Identities = 109/136 (80%), Gaps = 0/136 (0%)
Strand=Plus/Plus
Query 24157 CCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 24216
|||| ||||| ||||| | ||| |||||||| ||||| || ||||| ||||| || || |
Sbjct 2362149 CCTCATCTCTGCTAATAAGTTCATTGGAAAAGGTGAGGCCAGGCATCAGGCCGCGTTTCT 2362208
Query 24217 TAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGG 24276
| ||||| ||||| |||||||| || ||||||||||| |||||||| || || ||||| |
Sbjct 2362209 TGAGCCAGAATATCGACGCAAAAGAACCAGAAAAGAAGATTCCTTCCACAGCAGCAAAAG 2362268
Query 24277 CAATAAGTCTTTCTCC 24292
| | || | ||||||
Sbjct 2362269 CCACAACCCGTTCTCC 2362284
>seq158
Length=7371824
Score = 120 bits (132), Expect = 4e-22
Identities = 107/134 (80%), Gaps = 0/134 (0%)
Strand=Plus/Minus
Query 24159 TCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTA 24218
|| ||||| || || | ||| ||||||||||||||||||||||| || || | || ||
Sbjct 3463986 TCATCTCTGCTGATGAGTTCATTGGAAAACGTGAGTCCGGGCATGAGACCTCTTTTCTTT 3463927
Query 24219 AGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCA 24278
||||| ||||| | ||||| ||||| || ||||||||||||||||| || ||||| ||
Sbjct 3463926 AGCCAGAATATAGCAGCAAAAGATCCCGAGAAGAAAATTCCTTCTACAGCAGCAAAAGCC 3463867
Query 24279 ATAAGTCTTTCTCC 24292
| || |||||| ||
Sbjct 3463866 ACAACTCTTTCCCC 3463853
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 593692708022640
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