Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Odobenus_20rosmarus_20divergens_20[refseq_20GCF_5F000321225.1_202013 -01-16] 3,893 sequences; 2,400,150,193 total letters Query= NC_001623.1 Length=133894 Score E Sequences producing significant alignments: (Bits) Value seq530 89.7 4e-13 seq33 89.7 4e-13 seq395 82.4 7e-11 >seq530 Length=2118653 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021 ||||| || ||| | ||||| | ||||| || ||||| || ||| |||||| | Sbjct 64012 ATGCAGATTTTCGTGAAAACCCTTACGGGGAAGACCATCACTCTCGAGGTTGAACCCTCG 63953 Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081 || || | | || | ||| || ||| ||||| ||||| | | ||||| Sbjct 63952 GATACAATAGAAAATGTAAAGGCCAAGATTCAGGATAAGGAAGGAATTTCTCCTGATCAG 63893 Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAAT 29141 || ||||| |||||||| ||||| |||||||||||| ||| || | || ||||| Sbjct 63892 CAGAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGCACTTTGTCTGACTACAAC 63833 Query 29142 ATTCAGAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 29188 ||||| ||||| || |||||||| | ||||| || | || ||||| Sbjct 63832 ATTCAAAAGGAGTCCACTCTTCATCTTGTGTTGAGACTTCGTGGAGG 63786 >seq33 Length=6086033 Score = 89.7 bits (98), Expect = 4e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021 ||||| || ||| | ||||| | ||||| || ||||| || ||| |||||| | Sbjct 2214995 ATGCAGATTTTCGTGAAAACCCTTACGGGGAAGACCATCACTCTCGAGGTTGAACCCTCG 2214936 Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081 | || ||| || | ||| ||| ||| ||||| ||||| | || ||||| Sbjct 2214935 GGTACAATGGAAAATGTAAAGGCAAAGATTCAGGATAAGGAAGGAATTCCTCCTGATCAG 2214876 Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAAT 29141 || ||||| || ||||| ||||| |||||||||||| ||| || | || ||||| Sbjct 2214875 CAGAGACTGATATTTGCTGGCAAGCAACTGGAAGATGGACGCACTTTGTCTGACTACAAC 2214816 Query 29142 ATTCAGAAGGAATCTACTCTTCACATGGTGTT 29173 ||||| ||||| || |||||||| | ||||| Sbjct 2214815 ATTCAAAAGGAGTCCACTCTTCATCTTGTGTT 2214784 >seq395 Length=2662522 Score = 82.4 bits (90), Expect = 7e-11 Identities = 147/215 (68%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 28959 AAAATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCC 29018 || ||||| || ||| | ||||| | ||||| || |||||||| ||| ||||| Sbjct 955393 AAGATGCAGATTTTCGTGAAAACCCTTACGGGGAAGACCATTACTCTCGAGGTTGAACCT 955334 Query 29019 GCAGAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGAT 29078 | || || | | || | ||| || ||| |||||||||| | || ||| Sbjct 955333 TCGGATACAATAGAAAATGTAAAGGCCAAGATTCATAATAAAGAAGGAATTCCTCCTGAT 955274 Query 29079 CAACAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTAC 29138 || || ||||| ||||| | ||||| |||||||||||| ||| || | || ||| Sbjct 955273 CAGCAGAGACTGATCTTGCCTGGCAAGCAACTGGAAGATGGACGCACTTTGTCTGACTAC 955214 Query 29139 AATATTCAGAAGGAATCTACTCTTCACATGGTGTT 29173 || ||||| ||||| || |||||||| | ||||| Sbjct 955213 AACATTCAAAAGGAGTCCACTCTTCATCTTGTGTT 955179 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 428315677196915