Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Odobenus_20rosmarus_20divergens_20[refseq_20GCF_5F000321225.1_202013 -01-16] 3,893 sequences; 2,400,150,193 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq94 334 9e-87 seq537 178 2e-39 seq2231 170 2e-37 >seq94 Length=4555704 Score = 334 bits (370), Expect = 9e-87 Identities = 614/885 (69%), Gaps = 21/885 (2%) Strand=Plus/Plus Query 9478 CTGTATCTGCTTGTGTTTCTCTTTGGGTTGTTGGGCAATATCTTAGTGGTGATTATTGTC 9537 |||||| || |||||| | |||| || |||||||| | | |||||| | || || Sbjct 695592 CTGTATTCCCTGGTGTTTGTGGTTGGTCTGCTGGGCAATGTGGTGGTGGTGGTGATCCTC 695651 Query 9538 ATAAGATACATGAAGATCAAAAACCTCACTAACATGTTACTGTTAAACTTGGCAATATCT 9597 | | ||||| || | || | | || ||||| || ||| | || ||||| || ||| Sbjct 695652 ACGAAATACAAGAGGCTCTGGATTATGACCAACATCTTCCTGCTCAATTTGGCCATTTCT 695711 Query 9598 GACTTGCTATTTCTTTTAACTTTGCCATTTTGGATGCACTATA-TTGGAATGTATCATGA 9656 |||||||| ||||| || || || || ||||| |||||| |||| || | |||| Sbjct 695712 GACTTGCTTTTTCTATTCACCCTGGTGTTCTGGATTCACTATGCTTGG--TGGA--ATGA 695767 Query 9657 TTGGACTTTTGGTATTTCCCTGTGTAAACTGCTCAGGGGTGTGTGTTACATGTCACTGTA 9716 ||| |||||| |||| ||||||| || ||| || | | ||||||| | || Sbjct 695768 ATGGGTTTTTGGCTCTTCCATGTGTAAGCTCCTCTCCGGGCTTTATTACATGGGCTTATA 695827 Query 9717 CAGCCAGGTCTTTTGCATCATCCTGCTAACAGTAGACAGGTATCTAGCTGTTGTCTATGC 9776 ||| || |||||| ||||| |||||| || ||||| |||| || || | ||| |||| Sbjct 695828 CAGTGAGATCTTTTTCATCAGCCTGCTGACCATAGACCGGTACCTGGCCATCGTCCATGC 695887 Query 9777 TGTAACTGC--TTTGAGGTTTAGAACAGTAACCTGTGGCATAGTTACCTGTGTATGTACC 9834 || ||| || ||| | || || || | ||| | | || |||| ||| Sbjct 695888 CGTGTTTGCCCTTCGAGCCC--GGACTGTCACTTTTGGTGTCATCACGAGTGTTCTCACC 695945 Query 9835 TGGTTTCTGGCAGGGTTGTTGTCCCTCCCTGAATTTTTCTTTCATGGACACCAAGATGAC 9894 ||| ||||||||| | |||||||||||||| |||| |||| |||||| ||| Sbjct 695946 TGGGGCCTGGCAGGGCTAGCAGCCCTCCCTGAATTTATCTTCCATGAGTCCCAAGAAGAC 696005 Query 9895 AATGGTAGGGTTCAGTGTGAT--CCTTACTACCCAGAGATGTCTACAA-ATGTTTGGAGG 9951 | | ||| || || | ||| |||||| | | | | || | |||| | Sbjct 696006 G-TCCAACAGTTT-GTCTGCTTGCCTATTTACCCAAAAAAC-CAAGAAGACAGATGGAAG 696062 Query 9952 CGCGCCCACGTTGCAAAGGTGATTATGTTAAGTCTCATTTTGCCTCTGCTCATTATGGCT 10011 || ||| | | | ||| ||| | |||||| | ||||||||||||| |||| | Sbjct 696063 CGTTTCCATGCTCTGAGAATGAATATCCTGGGTCTCACTCTGCCTCTGCTCATCATGGTT 696122 Query 10012 GTCTGCTACTATGTAATTATCAGAAGACTGTTGAGGCGCCCCAGCAAGAAGAAGTACAAG 10071 |||||||||| || |||||| | || ||| |||| ||||||| ||||| ||||||||| Sbjct 696123 GTCTGCTACTCTGGAATTATTAAAACCCTGCTGAGATGCCCCAGTAAGAAAAAGTACAAG 696182 Query 10072 GCCATCAGGCTCATCTTTGTCATCATGGTGGCCTATTTTGTTTTTTGGACACCCTACAAC 10131 |||||| ||||||| |||||||||||||||| || ||| |||| ||||||||||||||| Sbjct 696183 GCCATCCGGCTCATTTTTGTCATCATGGTGGTCTTTTTCATTTTCTGGACACCCTACAAC 696242 Query 10132 ATTGTTCTCCTACTGTCTACCTTTCACGCAACCCTTCTT---AACCTGCAGTGTGCATTG 10188 | || ||| | || | | ||||| | | |||||| ||| || ||| ||| | Sbjct 696243 GTGGTCCTCTTCCTCACGGCTTTTCAAACGA-TCTTCTTTGAGACCAGCTGTGAGCA--G 696299 Query 10189 AGCAGTAACTTGGACATGGCTCTGCTGATAACAAAAACAGTAGCCTACACACACTGTTGC 10248 |||| | ||||| |||| ||| | | || | | |||||||| ||||| ||| Sbjct 696300 AGCAAACAGCTGGACGTGGCCATGCAGGTGACGGAGGTGATCGCCTACACGCACTGCTGC 696359 Query 10249 ATCAACCCAGTGATCTACGCGTTCGTGGGGGAGAAGTTTAGAAGACACCTGTACCACTTC 10308 ||||||| | |||||||| ||||| ||||||| ||| | | ||||| | ||||||| Sbjct 696360 GTCAACCCCATCATCTACGCCTTCGTAGGGGAGAGGTTCCGGAAGCACCTCTGCCACTTC 696419 Query 10309 TTCCACACCTACGTGGCCATCTACCTCTGCAAGTACATCCCCTTC 10353 |||| || ||||||||| |||||| |||| |||||||| ||| Sbjct 696420 TTCCGCAGGCACGTGGCCACCTACCTGGGCAAATACATCCCATTC 696464 Score = 334 bits (370), Expect = 9e-87 Identities = 614/885 (69%), Gaps = 21/885 (2%) Strand=Plus/Plus Query 176364 CTGTATCTGCTTGTGTTTCTCTTTGGGTTGTTGGGCAATATCTTAGTGGTGATTATTGTC 176423 |||||| || |||||| | |||| || |||||||| | | |||||| | || || Sbjct 695592 CTGTATTCCCTGGTGTTTGTGGTTGGTCTGCTGGGCAATGTGGTGGTGGTGGTGATCCTC 695651 Query 176424 ATAAGATACATGAAGATCAAAAACCTCACTAACATGTTACTGTTAAACTTGGCAATATCT 176483 | | ||||| || | || | | || ||||| || ||| | || ||||| || ||| Sbjct 695652 ACGAAATACAAGAGGCTCTGGATTATGACCAACATCTTCCTGCTCAATTTGGCCATTTCT 695711 Query 176484 GACTTGCTATTTCTTTTAACTTTGCCATTTTGGATGCACTATA-TTGGAATGTATCATGA 176542 |||||||| ||||| || || || || ||||| |||||| |||| || | |||| Sbjct 695712 GACTTGCTTTTTCTATTCACCCTGGTGTTCTGGATTCACTATGCTTGG--TGGA--ATGA 695767 Query 176543 TTGGACTTTTGGTATTTCCCTGTGTAAACTGCTCAGGGGTGTGTGTTACATGTCACTGTA 176602 ||| |||||| |||| ||||||| || ||| || | | ||||||| | || Sbjct 695768 ATGGGTTTTTGGCTCTTCCATGTGTAAGCTCCTCTCCGGGCTTTATTACATGGGCTTATA 695827 Query 176603 CAGCCAGGTCTTTTGCATCATCCTGCTAACAGTAGACAGGTATCTAGCTGTTGTCTATGC 176662 ||| || |||||| ||||| |||||| || ||||| |||| || || | ||| |||| Sbjct 695828 CAGTGAGATCTTTTTCATCAGCCTGCTGACCATAGACCGGTACCTGGCCATCGTCCATGC 695887 Query 176663 TGTAACTGC--TTTGAGGTTTAGAACAGTAACCTGTGGCATAGTTACCTGTGTATGTACC 176720 || ||| || ||| | || || || | ||| | | || |||| ||| Sbjct 695888 CGTGTTTGCCCTTCGAGCCC--GGACTGTCACTTTTGGTGTCATCACGAGTGTTCTCACC 695945 Query 176721 TGGTTTCTGGCAGGGTTGTTGTCCCTCCCTGAATTTTTCTTTCATGGACACCAAGATGAC 176780 ||| ||||||||| | |||||||||||||| |||| |||| |||||| ||| Sbjct 695946 TGGGGCCTGGCAGGGCTAGCAGCCCTCCCTGAATTTATCTTCCATGAGTCCCAAGAAGAC 696005 Query 176781 AATGGTAGGGTTCAGTGTGAT--CCTTACTACCCAGAGATGTCTACAA-ATGTTTGGAGG 176837 | | ||| || || | ||| |||||| | | | | || | |||| | Sbjct 696006 G-TCCAACAGTTT-GTCTGCTTGCCTATTTACCCAAAAAAC-CAAGAAGACAGATGGAAG 696062 Query 176838 CGCGCCCACGTTGCAAAGGTGATTATGTTAAGTCTCATTTTGCCTCTGCTCATTATGGCT 176897 || ||| | | | ||| ||| | |||||| | ||||||||||||| |||| | Sbjct 696063 CGTTTCCATGCTCTGAGAATGAATATCCTGGGTCTCACTCTGCCTCTGCTCATCATGGTT 696122 Query 176898 GTCTGCTACTATGTAATTATCAGAAGACTGTTGAGGCGCCCCAGCAAGAAGAAGTACAAG 176957 |||||||||| || |||||| | || ||| |||| ||||||| ||||| ||||||||| Sbjct 696123 GTCTGCTACTCTGGAATTATTAAAACCCTGCTGAGATGCCCCAGTAAGAAAAAGTACAAG 696182 Query 176958 GCCATCAGGCTCATCTTTGTCATCATGGTGGCCTATTTTGTTTTTTGGACACCCTACAAC 177017 |||||| ||||||| |||||||||||||||| || ||| |||| ||||||||||||||| Sbjct 696183 GCCATCCGGCTCATTTTTGTCATCATGGTGGTCTTTTTCATTTTCTGGACACCCTACAAC 696242 Query 177018 ATTGTTCTCCTACTGTCTACCTTTCACGCAACCCTTCTT---AACCTGCAGTGTGCATTG 177074 | || ||| | || | | ||||| | | |||||| ||| || ||| ||| | Sbjct 696243 GTGGTCCTCTTCCTCACGGCTTTTCAAACGA-TCTTCTTTGAGACCAGCTGTGAGCA--G 696299 Query 177075 AGCAGTAACTTGGACATGGCTCTGCTGATAACAAAAACAGTAGCCTACACACACTGTTGC 177134 |||| | ||||| |||| ||| | | || | | |||||||| ||||| ||| Sbjct 696300 AGCAAACAGCTGGACGTGGCCATGCAGGTGACGGAGGTGATCGCCTACACGCACTGCTGC 696359 Query 177135 ATCAACCCAGTGATCTACGCGTTCGTGGGGGAGAAGTTTAGAAGACACCTGTACCACTTC 177194 ||||||| | |||||||| ||||| ||||||| ||| | | ||||| | ||||||| Sbjct 696360 GTCAACCCCATCATCTACGCCTTCGTAGGGGAGAGGTTCCGGAAGCACCTCTGCCACTTC 696419 Query 177195 TTCCACACCTACGTGGCCATCTACCTCTGCAAGTACATCCCCTTC 177239 |||| || ||||||||| |||||| |||| |||||||| ||| Sbjct 696420 TTCCGCAGGCACGTGGCCACCTACCTGGGCAAATACATCCCATTC 696464 Score = 96.9 bits (106), Expect = 4e-15 Identities = 176/254 (69%), Gaps = 4/254 (2%) Strand=Plus/Minus Query 176934 CGCCCCAGCAAGAAGAAGTACAAGGCCATCAGGCTCATCTTTGTCATCATGGTGGCCTAT 176993 || |||| | ||||||| ||| ||| || | || ||||||||||||||| | | || Sbjct 651265 CGACCCAACGAGAAGAAAGCCAAAGCCGTCCGTCTGATCTTTGTCATCATGATCGTCTTC 651206 Query 176994 TTTGTTTTTTGGACACCCTACAACATTGTTCTCCTACTGTCTACCTTTCACGCAACCCTT 177053 ||| | || ||||| ||||||||| | | | || | ||| | || || | | || | Sbjct 651205 TTTCTCTTCTGGACCCCCTACAACCTGGCAGTGCTTGTCTCTGCTTTCCAAGACAGCC-T 651147 Query 177054 CTTAACCTGCAGTGTGCA--TTGAGCAGTAACTTGGACATGGCTCTGCTGATAACAAAAA 177111 ||| ||| | | ||||| ||||| | ||||| |||| ||| | | ||| | Sbjct 651146 CTTCACC-GATGAGTGCAGGCAGAGCAAACAGCTGGACCTGGCCTTGCAGGTGACAGAGG 651088 Query 177112 CAGTAGCCTACACACACTGTTGCATCAACCCAGTGATCTACGCGTTCGTGGGGGAGAAGT 177171 | |||||||| ||||| ||| |||||| || |||||||| ||||| ||||||| || Sbjct 651087 TGATCGCCTACACGCACTGCTGCGCCAACCCCGTCATCTACGCCTTCGTCGGGGAGAGGT 651028 Query 177172 TTAGAAGACACCTG 177185 | | || ||||| Sbjct 651027 TCCGCAGGTACCTG 651014 Score = 96.9 bits (106), Expect = 4e-15 Identities = 176/254 (69%), Gaps = 4/254 (2%) Strand=Plus/Minus Query 10048 CGCCCCAGCAAGAAGAAGTACAAGGCCATCAGGCTCATCTTTGTCATCATGGTGGCCTAT 10107 || |||| | ||||||| ||| ||| || | || ||||||||||||||| | | || Sbjct 651265 CGACCCAACGAGAAGAAAGCCAAAGCCGTCCGTCTGATCTTTGTCATCATGATCGTCTTC 651206 Query 10108 TTTGTTTTTTGGACACCCTACAACATTGTTCTCCTACTGTCTACCTTTCACGCAACCCTT 10167 ||| | || ||||| ||||||||| | | | || | ||| | || || | | || | Sbjct 651205 TTTCTCTTCTGGACCCCCTACAACCTGGCAGTGCTTGTCTCTGCTTTCCAAGACAGCC-T 651147 Query 10168 CTTAACCTGCAGTGTGCA--TTGAGCAGTAACTTGGACATGGCTCTGCTGATAACAAAAA 10225 ||| ||| | | ||||| ||||| | ||||| |||| ||| | | ||| | Sbjct 651146 CTTCACC-GATGAGTGCAGGCAGAGCAAACAGCTGGACCTGGCCTTGCAGGTGACAGAGG 651088 Query 10226 CAGTAGCCTACACACACTGTTGCATCAACCCAGTGATCTACGCGTTCGTGGGGGAGAAGT 10285 | |||||||| ||||| ||| |||||| || |||||||| ||||| ||||||| || Sbjct 651087 TGATCGCCTACACGCACTGCTGCGCCAACCCCGTCATCTACGCCTTCGTCGGGGAGAGGT 651028 Query 10286 TTAGAAGACACCTG 10299 | | || ||||| Sbjct 651027 TCCGCAGGTACCTG 651014 >seq537 Length=2461945 Score = 178 bits (196), Expect = 2e-39 Identities = 136/161 (84%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 145750 AGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGC 145809 ||||| |||| ||| |||| ||||||||| ||||| | ||||||||| |||||||||||| Sbjct 243277 AGGCCTGTGATGTGCGCGATCATGTAGGTGAGCAGAGCGTAGCTGGCGATGTTGAAGGGC 243336 Query 145810 ACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCCCCGCCCGCC 145869 || ||||| |||||||||||||| | |||||||||||| ||||| ||||| ||| | || Sbjct 243337 ACACCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGACAGGACAGCTCGCCGTTCACC 243396 Query 145870 ACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCAT 145910 |||||||||||||| ||| ||||| || || |||||||| Sbjct 243397 ACGTAGAACTGGCAGAGGGCATGGCACGGAGGGAGGGCCAT 243437 >seq2231 Length=228578 Score = 170 bits (188), Expect = 2e-37 Identities = 133/158 (84%), Gaps = 3/158 (2%) Strand=Plus/Minus Query 138081 GCAGCGCCTCAGCCTCACCCTGAGGGTTTTGAGCTTTTCCCCCAGGGAGTTCACTTTATC 138140 ||| |||| |||||||| ||||||||| || ||||||||||||||||||||||| | || Sbjct 45082 GCAACGCCGCAGCCTCAGCCTGAGGGTCTTCAGCTTTTCCCCCAGGGAGTTCACGTGCTC 45023 Query 138141 CTTTTCCTGGTCGGTGCTGTGGTTCTCGGCCTGGGGCATCACCTCCTCCAGGTAAAACTG 138200 ||| ||| | | ||||||||| |||||||||||||||||||| ||||| ||||| Sbjct 45022 CTTGAT---GTCTGGGTCGTGGTTCTCAGCCTGGGGCATCACCTCCTCTAGGTAGAACTG 44966 Query 138201 GATCATCTCAGACAGGGCCTGGCAGCCCAGGTAACCCT 138238 ||||||||| |||| ||| ||||| ||||||||||||| Sbjct 44965 GATCATCTCCGACAAGGCTTGGCAACCCAGGTAACCCT 44928 Score = 116 bits (128), Expect = 4e-21 Identities = 130/170 (76%), Gaps = 8/170 (5%) Strand=Plus/Minus Query 138297 AAAGAAGGTCTTTACCCTGCTGAAGGCGGCCCTGAGCTCGTGGAGCATGTGGGGCAGGCT 138356 ||| || ||||| ||||||| |||||| || | |||||| ||||||||||||||||||| Sbjct 43796 AAAAAAAGTCTTCACCCTGCCGAAGGCAGCTCGGAGCTCTCGGAGCATGTGGGGCAGGCT 43737 Query 138357 GG-TGGGCAATGTAGGGCAGTCGTCCCCAGAC---TCACTGTCATATTTGTTGTCGGCCC 138412 || |||| | || | ||||| |||| ||||| | || | || | | | ||| | Sbjct 43736 GGCTGGGAAGTG-GGTGCAGTTGTCCTCAGACAGGGCGCTCTGATGTCGGCT---GGCTC 43681 Query 138413 ACACCCCGGCCAGGAGAACCAGGCAACACAGCAGCGATGCCCTGAACATG 138462 |||||| ||||||| |||||||||||||||||||||| ||| |||| Sbjct 43680 CTACCCCGACCAGGAGGACCAGGCAACACAGCAGCGATGGGCTGGGCATG 43631 Score = 113 bits (124), Expect = 5e-20 Identities = 82/95 (86%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 137922 TCAGTTTTTCATCTTTGTGGTCATGTAGGCCTCTATGTAGTTAATGAAGATGTCAAACTC 137981 |||| |||||||||| | |||||||||| ||||||||||| ||||||||||||||||| Sbjct 47342 TCAGATTTTCATCTTCATTGTCATGTAGGTTTCTATGTAGTTGATGAAGATGTCAAACTC 47283 Query 137982 GCTCATGGCCTTGTAGACCCCTTTTTCCTGGAGCT 138016 |||||||| |||||||| ||| | || ||||||| Sbjct 47282 ACTCATGGCTTTGTAGACACCTCTCTCTTGGAGCT 47248 Score = 82.4 bits (90), Expect = 9e-11 Identities = 54/60 (90%), Gaps = 0/60 (0%) Strand=Plus/Minus Query 138015 CTTGCTGAAGGCGCTCTTCACCTGCTCCACGGCCTTGCTCTTATTCTCGCAGGGCAGGAA 138074 ||| || |||||| |||||||||||||||| ||||||||||||||||| |||||||| || Sbjct 46180 CTTACTAAAGGCGTTCTTCACCTGCTCCACTGCCTTGCTCTTATTCTCACAGGGCAGAAA 46121 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590048085387720