Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Odobenus_20rosmarus_20divergens_20[refseq_20GCF_5F000321225.1_202013
-01-16] 3,893 sequences; 2,400,150,193 total letters
Query= NC_001962.1
Length=128413
Score E
Sequences producing significant alignments: (Bits) Value
seq530 89.7 4e-13
seq33 89.7 4e-13
seq29 87.8 1e-12
seq395 82.4 6e-11
>seq530
Length=2118653
Score = 89.7 bits (98), Expect = 4e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094
||||| || ||| | ||||| | ||||| || ||||| || ||| |||||| |
Sbjct 64012 ATGCAGATTTTCGTGAAAACCCTTACGGGGAAGACCATCACTCTCGAGGTTGAACCCTCG 63953
Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154
|| || | | || | ||| || ||| ||||| ||||| | | |||||
Sbjct 63952 GATACAATAGAAAATGTAAAGGCCAAGATTCAGGATAAGGAAGGAATTTCTCCTGATCAG 63893
Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214
|| ||||| |||||||| ||||| ||| |||||||| ||| || | || |||||
Sbjct 63892 CAGAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGCACTTTGTCTGACTACAAC 63833
Query 25215 ATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261
||||||||||| || |||||||| | ||||| || | || |||||
Sbjct 63832 ATTCAAAAGGAGTCCACTCTTCATCTTGTGTTGAGACTTCGTGGAGG 63786
>seq33
Length=6086033
Score = 89.7 bits (98), Expect = 4e-13
Identities = 147/212 (69%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094
||||| || ||| | ||||| | ||||| || ||||| || ||| |||||| |
Sbjct 2214995 ATGCAGATTTTCGTGAAAACCCTTACGGGGAAGACCATCACTCTCGAGGTTGAACCCTCG 2214936
Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154
| || ||| || | ||| ||| ||| ||||| ||||| | || |||||
Sbjct 2214935 GGTACAATGGAAAATGTAAAGGCAAAGATTCAGGATAAGGAAGGAATTCCTCCTGATCAG 2214876
Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214
|| ||||| || ||||| ||||| ||| |||||||| ||| || | || |||||
Sbjct 2214875 CAGAGACTGATATTTGCTGGCAAGCAACTGGAAGATGGACGCACTTTGTCTGACTACAAC 2214816
Query 25215 ATTCAAAAGGAATCTACTCTTCACATGGTGTT 25246
||||||||||| || |||||||| | |||||
Sbjct 2214815 ATTCAAAAGGAGTCCACTCTTCATCTTGTGTT 2214784
>seq29
Length=5782310
Score = 87.8 bits (96), Expect = 1e-12
Identities = 78/98 (80%), Gaps = 0/98 (0%)
Strand=Plus/Plus
Query 25149 GATCAACAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGAT 25208
||||| || ||||| |||||||| ||||| |||||||||||| | || || | ||
Sbjct 156525 GATCAGCAGAGACTGATCTTTGCTGGCAAGCAATTGGAAGATGGACACACATTGTCTGAC 156584
Query 25209 TACAATATTCAAAAGGAATCTACTCTTCACATGGTGTT 25246
||||| |||||||||||||| |||||||| | |||||
Sbjct 156585 TACAACATTCAAAAGGAATCCACTCTTCATCTTGTGTT 156622
>seq395
Length=2662522
Score = 82.4 bits (90), Expect = 6e-11
Identities = 147/215 (68%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 25032 AAAATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCC 25091
|| ||||| || ||| | ||||| | ||||| || |||||||| ||| |||||
Sbjct 955393 AAGATGCAGATTTTCGTGAAAACCCTTACGGGGAAGACCATTACTCTCGAGGTTGAACCT 955334
Query 25092 GCAGAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGAT 25151
| || || | | || | ||| || ||| |||||||||| | || |||
Sbjct 955333 TCGGATACAATAGAAAATGTAAAGGCCAAGATTCATAATAAAGAAGGAATTCCTCCTGAT 955274
Query 25152 CAACAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTAC 25211
|| || ||||| ||||| | ||||| ||| |||||||| ||| || | || |||
Sbjct 955273 CAGCAGAGACTGATCTTGCCTGGCAAGCAACTGGAAGATGGACGCACTTTGTCTGACTAC 955214
Query 25212 AATATTCAAAAGGAATCTACTCTTCACATGGTGTT 25246
|| ||||||||||| || |||||||| | |||||
Sbjct 955213 AACATTCAAAAGGAGTCCACTCTTCATCTTGTGTT 955179
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 410777309360702
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |