Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Odobenus_20rosmarus_20divergens_20[refseq_20GCF_5F000321225.1_202013 -01-16] 3,893 sequences; 2,400,150,193 total letters Query= NC_001993.1 Length=236120 Score E Sequences producing significant alignments: (Bits) Value seq1198 95.1 2e-14 seq949 87.8 3e-12 seq340 84.2 3e-11 >seq1198 Length=804178 Score = 95.1 bits (104), Expect = 2e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 ||||| || || | ||||| ||||| ||||| || || || | ||| | || | | | Sbjct 573713 ATGCAGATCTTCGTGAAGACCCTAACCGGCAAGACCATCACCCTGGAGGTGGAGCCCAGT 573772 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 || || | | || | || ||| || ||||||||||| || || || ||||| || Sbjct 573773 GACACCACTGAAAACGTGAAGGCGAAGATCCAAGATAAAGAGGGCATCCCCCCTGACCAG 573832 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 || |||||||| ||||| || || || | || ||| | || || | ||||| ||| Sbjct 573833 CAGAGGCTTATCTTTGCTGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCTGATTACAAT 573892 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGG 124765 || || ||||| |||||| | || ||||| | ||| | ||||||| Sbjct 573893 ATCCAGAAAGAGTCAACTCTCCACCTGGTTCTCCGTCTGAGAGGTGG 573939 >seq949 Length=596474 Score = 87.8 bits (96), Expect = 3e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597 |||||| || ||| | ||||| || || ||||| || || || | ||| | || | | Sbjct 262381 AATGCAGATCTTTGTGAAGACCCTGACCGGCAAGACCATCACCCTGGAGGTGGAGCCCAG 262322 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 ||| || || ||| | || || || ||||||||||| || || || ||||| || Sbjct 262321 TGACACCATCGAAAATGTGAAGGCCAAGATCCAAGATAAAGAGGGCATCCCCCCTGACCA 262262 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 || |||||||| ||||| || || || | || ||| | || || | ||||| || Sbjct 262261 GCAGAGGCTTATCTTTGCTGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCTGATTACAA 262202 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGG 124765 || || ||||| |||||| | || ||||| | ||| | | ||||| Sbjct 262201 CATCCAGAAAGAGTCAACTCTCCACCTGGTTCTCCGTCTCAGGGGTGG 262154 >seq340 Length=3380363 Score = 84.2 bits (92), Expect = 3e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 ||||| || ||| | ||||| || || ||||| ||||| ||| | ||| | ||| | | | Sbjct 3004928 ATGCAGATTTTTGTGAAGACTCTGACCGGCAAGACTATCACTCTGGAGGTGGAATCCAGT 3004987 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGG-TATACCACCTGATCA 124657 | || || ||| | || || || |||||||||||||| || || |||| || Sbjct 3004988 AACACCATCAAGAATGTGAAGGCTAAGATCCAAGATAAAGAAGGCAATCCCCTCTGACCA 3005047 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 || ||||| || |||||||| || || | || ||| | | || || ||||| || Sbjct 3005048 GCAGAGGCTCATCTTTGCAGGCAAGCAGCTGGAAGATGGCCTTAC-TTTTCTGATTACAA 3005106 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGG 124765 || || |||| |||||| |||| ||||| | ||| | | ||||| Sbjct 3005107 CATCCAGAAAGGGTCAACTCTGCACCTGGTTCTCCGTCTGAGGGGTGG 3005154 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 755419237622400