Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Odobenus_20rosmarus_20divergens_20[refseq_20GCF_5F000321225.1_202013 -01-16] 3,893 sequences; 2,400,150,193 total letters Query= NC_002188.1 Length=288539 Score E Sequences producing significant alignments: (Bits) Value seq105 98.7 2e-15 >seq105 Length=4375530 Score = 98.7 bits (108), Expect = 2e-15 Identities = 108/144 (75%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 52185 GGTACAGTTCCATATAGCTATAGGACATACTGCTATGTCCATTTACATAGATTGCCCGTT 52244 ||| ||||||||| | | || ||||| || || |||| |||||| |||||| || || Sbjct 2121977 GGTTCAGTTCCATGTGACCATTGGACACACAGCGCTGTCTCTTTACACAGATTGTCCCTT 2121918 Query 52245 TCCAAAATGGATACAGTGGTCAGTTATTATCTATTCTATTAGTTTCATATTACTGTTTGG 52304 ||||||||||| || ||| | | ||| ||| | || || |||||||| || ||| Sbjct 2121917 CCCAAAATGGATGCACTGGGCCCTCATTGCCTACGCGATCAGCTTCATATTTCTCTTTCT 2121858 Query 52305 TAACTTCTATTTTAGAACATACAA 52328 |||||||||| || | |||||||| Sbjct 2121857 TAACTTCTATGTTCGGACATACAA 2121834 Score = 95.1 bits (104), Expect = 2e-14 Identities = 103/133 (77%), Gaps = 4/133 (3%) Strand=Plus/Minus Query 52057 GCATTTTTTGGAGCTCAGCTAAATTCTTTTATCCATGTTATTATGTACACTTATTATGGT 52116 |||||||||||||| ||||| ||||| || |||||||| ||||||||| | || || || Sbjct 2124623 GCATTTTTTGGAGCACAGCTGAATTCCTTCATCCATGTGATTATGTACTCATACTACGGG 2124564 Query 52117 ATGGCCGCTTGTGGTCCTATG--TTCAGAAAGTATCTATGGTGGAAACGTTATCTTACTA 52174 | | || | ||| || ||| ||||| |||||||| ||||||||||| || | || | Sbjct 2124563 TTAACTGCGTTTGG-CCCATGGATTCAG-AAGTATCTTTGGTGGAAACGATACTTGACCA 2124506 Query 52175 TAATGCAGTTGGT 52187 | ||||| |||| Sbjct 2124505 TGTTGCAGCTGGT 2124493 Score = 95.1 bits (104), Expect = 2e-14 Identities = 114/155 (74%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 51901 TGGTTGTACTATATATCCAAAGGGATAGAATACTTGGATACGGTATTTTTCATACTTAGG 51960 |||| ||||| | |||| |||||| | || || ||||| || || ||||| || || ||| Sbjct 2126319 TGGTGGTACTTTGTATCTAAAGGGGTTGAGTATTTGGACACCGTGTTTTTTATCCTGAGG 2126260 Query 51961 AAAAAATTTAATCAGGTTAGTTTTCTACACGTATATCATCATTTTACTATGTTTACTCTA 52020 || ||| || || || ||| || || ||||||||||| | ||| |||||||| | Sbjct 2126259 AAGAAAAACAACCAAGTCTCTTTCCTTCATGTATATCATCACTGTACAATGTTTACATTG 2126200 Query 52021 GGATGGATAGGTATTAAATGGTTTGCTGGAGGTCA 52055 | ||||| || ||||||||| | || || || || Sbjct 2126199 TGGTGGATTGGAATTAAATGGGTCGCAGGGGGACA 2126165 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 923151874935720