Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Odobenus_20rosmarus_20divergens_20[refseq_20GCF_5F000321225.1_202013
-01-16] 3,893 sequences; 2,400,150,193 total letters
Query= NC_002331.1
Length=178733
Score E
Sequences producing significant alignments: (Bits) Value
seq314 127 2e-24
seq85 118 1e-21
seq184 102 9e-17
seq88 102 9e-17
seq772 100 3e-16
seq114 98.7 1e-15
seq47 98.7 1e-15
seq454 96.9 4e-15
seq1198 93.3 5e-14
seq199 89.7 6e-13
seq2164 87.8 2e-12
seq33 86.0 7e-12
>seq314
Length=2398313
Score = 127 bits (140), Expect = 2e-24
Identities = 154/210 (73%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 42974 CACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATC 43033
|||||| |||| ||| ||| || || ||||| || || | |||||| || | || ||
Sbjct 2323439 CACCAAGTGCAGGGTGGACTCTTTCTGGATATTATAGTCTGACAGAGTACGGCCATCTTC 2323498
Query 43034 TAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 43093
||||| || || || || || || ||||||||||| | ||| | || |||||||||
Sbjct 2323499 CAGCTGTTTGCCCGCAAAAATCAGACGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCTTG 2323558
Query 43094 GATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTT 43153
|||||| ||||| || | | ||||| || | || || |||| |||||||| ||
Sbjct 2323559 GATTTTGGCTTTGACATTCTCAATAGTGTCACTGGGCTCGACCTCGAGGGTGATGGTCTT 2323618
Query 43154 GCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183
|||||| || ||||| |||||||| |||||
Sbjct 2323619 GCCCGTCAGGGTCTTCACAAAGATCTGCAT 2323648
>seq85
Length=4131313
Score = 118 bits (130), Expect = 1e-21
Identities = 152/210 (72%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 42974 CACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATC 43033
|||||| |||| ||| ||| || || ||||| || || | |||||| || | || ||
Sbjct 1818201 CACCAAGTGCAGGGTGGACTCTTTCTGGATATTATAGTCTGACAGAGTACGGCCATCTTC 1818260
Query 43034 TAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 43093
||||| || || || || || || ||||||||||| | ||| | || |||||||||
Sbjct 1818261 CAGCTGTTTGCCCGCAAAAATCAGACGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCTTG 1818320
Query 43094 GATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTT 43153
|||||| ||||| || | | | ||| || | || || |||| |||||||| ||
Sbjct 1818321 GATTTTGGCTTTGACATTCTCAATAGCGTCACTGGGCTCGACCTCGAGGGTGATGGTCTT 1818380
Query 43154 GCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183
||| || || ||||| |||||||| |||||
Sbjct 1818381 GCCTGTCAGGGTCTTCACAAAGATCTGCAT 1818410
>seq184
Length=2979863
Score = 102 bits (112), Expect = 9e-17
Identities = 68/76 (89%), Gaps = 0/76 (0%)
Strand=Plus/Minus
Query 60062 TTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACC 60121
|| ||||| || | ||||||||||||| ||||||||||||||||||||| |||||||||
Sbjct 24127 TTGTCTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACC 24068
Query 60122 ACTATACTACCGAGGA 60137
||||||||| ||||||
Sbjct 24067 ACTATACTAACGAGGA 24052
>seq88
Length=4457695
Score = 102 bits (112), Expect = 9e-17
Identities = 67/74 (91%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 60064 TTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCAC 60123
|||||| || | ||||||||||||| ||||||||||||||||||||| |||||||||||
Sbjct 1879293 TTCTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCAC 1879234
Query 60124 TATACTACCGAGGA 60137
||||||| ||||||
Sbjct 1879233 TATACTAACGAGGA 1879220
>seq772
Length=1036051
Score = 100 bits (110), Expect = 3e-16
Identities = 66/73 (90%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124
||||| || | ||||||||||||| ||||||||||||||||||||| ||||||||||||
Sbjct 260586 TCTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACT 260527
Query 60125 ATACTACCGAGGA 60137
|||||| ||||||
Sbjct 260526 ATACTAACGAGGA 260514
Score = 98.7 bits (108), Expect = 1e-15
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125
|||| || | ||||||||||||| ||||||||||||||||||||| |||||||||||||
Sbjct 327171 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 327230
Query 60126 TACTACCGAGGA 60137
||||| ||||||
Sbjct 327231 TACTAACGAGGA 327242
>seq114
Length=5070965
Score = 98.7 bits (108), Expect = 1e-15
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125
|||| || | ||||||||||||| ||||||||||||||||||||| |||||||||||||
Sbjct 1474240 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 1474299
Query 60126 TACTACCGAGGA 60137
||||| ||||||
Sbjct 1474300 TACTAACGAGGA 1474311
>seq47
Length=4803410
Score = 98.7 bits (108), Expect = 1e-15
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125
|||| || | ||||||||||||| ||||||||||||||||||||| |||||||||||||
Sbjct 4300575 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 4300634
Query 60126 TACTACCGAGGA 60137
||||| ||||||
Sbjct 4300635 TACTAACGAGGA 4300646
Score = 98.7 bits (108), Expect = 1e-15
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125
|||| || | ||||||||||||| ||||||||||||||||||||| |||||||||||||
Sbjct 4302929 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 4302988
Query 60126 TACTACCGAGGA 60137
||||| ||||||
Sbjct 4302989 TACTAACGAGGA 4303000
>seq454
Length=1231369
Score = 96.9 bits (106), Expect = 4e-15
Identities = 64/71 (90%), Gaps = 0/71 (0%)
Strand=Plus/Plus
Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125
|||| || ||||||||||||||| |||||||||||||||||| || ||||||| ||||||
Sbjct 1045277 CTCCCCGTCAGGGAATCGAACCCCGGTCTCCCGCGTGACAGGTGGGCATACTCCCCACTA 1045336
Query 60126 TACTACCGAGG 60136
||||| |||||
Sbjct 1045337 TACTAACGAGG 1045347
>seq1198
Length=804178
Score = 93.3 bits (102), Expect = 5e-14
Identities = 138/193 (72%), Gaps = 2/193 (1%)
Strand=Plus/Minus
Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051
||| || || ||||||||||||| ||||| || | || || |||||||| ||||| ||
Sbjct 573904 CTCTTTCTGGATATTGTAATCAGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAA 573845
Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111
|| || | ||||||||| | || | || ||| || || ||| || || | |||
Sbjct 573844 GATAAGCCTCTGCTGGTCAGGGGGGATGCCCTCTTTATCTTGGATCTTCGCCTTCA-CGT 573786
Query 43112 CGCCA-CCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 43170
|| ||||| || | ||||| || | |||||||| ||||| ||||| ||||| |
Sbjct 573785 TTTCAGTGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTTAGGGTCTTCA 573726
Query 43171 CAAAGATTTGCAT 43183
| ||||| |||||
Sbjct 573725 CGAAGATCTGCAT 573713
>seq199
Length=3010087
Score = 89.7 bits (98), Expect = 6e-13
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125
|||| || | |||||| |||||| ||||||||||||||||||||| ||||| |||||||
Sbjct 2423010 CTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCACTA 2423069
Query 60126 TACTACCGAGGA 60137
||||| ||||||
Sbjct 2423070 TACTAACGAGGA 2423081
>seq2164
Length=79412
Score = 87.8 bits (96), Expect = 2e-12
Identities = 144/208 (69%), Gaps = 0/208 (0%)
Strand=Plus/Minus
Query 42974 CACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATC 43033
|||||| |||| ||| || || || ||||| | || | |||||| | | | ||
Sbjct 52108 CACCAAGTGCAGGGTGGAGTCTTTCTGGATATTATCGTCTGACAGAGTATGGCCATTTTC 52049
Query 43034 TAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 43093
||||| || || | || || || ||||||||||| | ||| | | |||||||||
Sbjct 52048 CAGCTGTTTGCCCACAAAAATCAGACGCTGCTGGTCAGGCGGGATACCCTCCTTGTCTTG 51989
Query 43094 GATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTT 43153
|||||| ||||| || | ||||| || | || || | || |||||||| ||
Sbjct 51988 GATTTTGGCTTTGACATTCTCAGTAGTGTCACTGGGCTCGACCTTGAGGGTGATGGTCTT 51929
Query 43154 GCCCGTTAGCGTCTTTACAAAGATTTGC 43181
|||||| || ||||| |||||||| |||
Sbjct 51928 GCCCGTCAGGGTCTTCACAAAGATCTGC 51901
>seq33
Length=6086033
Score = 86.0 bits (94), Expect = 7e-12
Identities = 149/214 (70%), Gaps = 2/214 (1%)
Strand=Plus/Plus
Query 42971 CAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTC 43030
|||||| | ||| | ||| |||||||||||| ||||| |||| || ||| || | ||
Sbjct 2214783 CAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTGCGTCCATC 2214842
Query 43031 ATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTC 43090
|| || ||||| ||||| ||||| |||| |||||| || | || | | ||||| ||
Sbjct 2214843 TTCCAGTTGCTTGCCAGCAAATATCAGTCTCTGCTGATCAGGAGGAATTCCTTCCTTATC 2214902
Query 43091 CATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGG 43149
| ||| | |||| || | | ||| || | | ||| || |||| |||||||
Sbjct 2214903 C-TGAATCTTTGCCTTTACATTTTCCATTGTACCCGAGGGTTCAACCTCGAGAGTGATGG 2214961
Query 43150 TTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183
| || ||||| || || || || || || |||||
Sbjct 2214962 TCTTCCCCGTAAGGGTTTTCACGAAAATCTGCAT 2214995
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 571789773926040
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