Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Odobenus_20rosmarus_20divergens_20[refseq_20GCF_5F000321225.1_202013 -01-16] 3,893 sequences; 2,400,150,193 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq314 127 2e-24 seq85 118 1e-21 seq184 102 9e-17 seq88 102 9e-17 seq772 100 3e-16 seq114 98.7 1e-15 seq47 98.7 1e-15 seq454 96.9 4e-15 seq1198 93.3 5e-14 seq199 89.7 6e-13 seq2164 87.8 2e-12 seq33 86.0 7e-12 >seq314 Length=2398313 Score = 127 bits (140), Expect = 2e-24 Identities = 154/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 42974 CACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATC 43033 |||||| |||| ||| ||| || || ||||| || || | |||||| || | || || Sbjct 2323439 CACCAAGTGCAGGGTGGACTCTTTCTGGATATTATAGTCTGACAGAGTACGGCCATCTTC 2323498 Query 43034 TAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 43093 ||||| || || || || || || ||||||||||| | ||| | || ||||||||| Sbjct 2323499 CAGCTGTTTGCCCGCAAAAATCAGACGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCTTG 2323558 Query 43094 GATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTT 43153 |||||| ||||| || | | ||||| || | || || |||| |||||||| || Sbjct 2323559 GATTTTGGCTTTGACATTCTCAATAGTGTCACTGGGCTCGACCTCGAGGGTGATGGTCTT 2323618 Query 43154 GCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 |||||| || ||||| |||||||| ||||| Sbjct 2323619 GCCCGTCAGGGTCTTCACAAAGATCTGCAT 2323648 >seq85 Length=4131313 Score = 118 bits (130), Expect = 1e-21 Identities = 152/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 42974 CACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATC 43033 |||||| |||| ||| ||| || || ||||| || || | |||||| || | || || Sbjct 1818201 CACCAAGTGCAGGGTGGACTCTTTCTGGATATTATAGTCTGACAGAGTACGGCCATCTTC 1818260 Query 43034 TAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 43093 ||||| || || || || || || ||||||||||| | ||| | || ||||||||| Sbjct 1818261 CAGCTGTTTGCCCGCAAAAATCAGACGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCTTG 1818320 Query 43094 GATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTT 43153 |||||| ||||| || | | | ||| || | || || |||| |||||||| || Sbjct 1818321 GATTTTGGCTTTGACATTCTCAATAGCGTCACTGGGCTCGACCTCGAGGGTGATGGTCTT 1818380 Query 43154 GCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 ||| || || ||||| |||||||| ||||| Sbjct 1818381 GCCTGTCAGGGTCTTCACAAAGATCTGCAT 1818410 >seq184 Length=2979863 Score = 102 bits (112), Expect = 9e-17 Identities = 68/76 (89%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 60062 TTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACC 60121 || ||||| || | ||||||||||||| ||||||||||||||||||||| ||||||||| Sbjct 24127 TTGTCTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACC 24068 Query 60122 ACTATACTACCGAGGA 60137 ||||||||| |||||| Sbjct 24067 ACTATACTAACGAGGA 24052 >seq88 Length=4457695 Score = 102 bits (112), Expect = 9e-17 Identities = 67/74 (91%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 60064 TTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCAC 60123 |||||| || | ||||||||||||| ||||||||||||||||||||| ||||||||||| Sbjct 1879293 TTCTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCAC 1879234 Query 60124 TATACTACCGAGGA 60137 ||||||| |||||| Sbjct 1879233 TATACTAACGAGGA 1879220 >seq772 Length=1036051 Score = 100 bits (110), Expect = 3e-16 Identities = 66/73 (90%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124 ||||| || | ||||||||||||| ||||||||||||||||||||| |||||||||||| Sbjct 260586 TCTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACT 260527 Query 60125 ATACTACCGAGGA 60137 |||||| |||||| Sbjct 260526 ATACTAACGAGGA 260514 Score = 98.7 bits (108), Expect = 1e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| || | ||||||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct 327171 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 327230 Query 60126 TACTACCGAGGA 60137 ||||| |||||| Sbjct 327231 TACTAACGAGGA 327242 >seq114 Length=5070965 Score = 98.7 bits (108), Expect = 1e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| || | ||||||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct 1474240 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 1474299 Query 60126 TACTACCGAGGA 60137 ||||| |||||| Sbjct 1474300 TACTAACGAGGA 1474311 >seq47 Length=4803410 Score = 98.7 bits (108), Expect = 1e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| || | ||||||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct 4300575 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 4300634 Query 60126 TACTACCGAGGA 60137 ||||| |||||| Sbjct 4300635 TACTAACGAGGA 4300646 Score = 98.7 bits (108), Expect = 1e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| || | ||||||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct 4302929 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 4302988 Query 60126 TACTACCGAGGA 60137 ||||| |||||| Sbjct 4302989 TACTAACGAGGA 4303000 >seq454 Length=1231369 Score = 96.9 bits (106), Expect = 4e-15 Identities = 64/71 (90%), Gaps = 0/71 (0%) Strand=Plus/Plus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| || ||||||||||||||| |||||||||||||||||| || ||||||| |||||| Sbjct 1045277 CTCCCCGTCAGGGAATCGAACCCCGGTCTCCCGCGTGACAGGTGGGCATACTCCCCACTA 1045336 Query 60126 TACTACCGAGG 60136 ||||| ||||| Sbjct 1045337 TACTAACGAGG 1045347 >seq1198 Length=804178 Score = 93.3 bits (102), Expect = 5e-14 Identities = 138/193 (72%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 ||| || || ||||||||||||| ||||| || | || || |||||||| ||||| || Sbjct 573904 CTCTTTCTGGATATTGTAATCAGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAA 573845 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 || || | ||||||||| | || | || ||| || || ||| || || | ||| Sbjct 573844 GATAAGCCTCTGCTGGTCAGGGGGGATGCCCTCTTTATCTTGGATCTTCGCCTTCA-CGT 573786 Query 43112 CGCCA-CCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 43170 || ||||| || | ||||| || | |||||||| ||||| ||||| ||||| | Sbjct 573785 TTTCAGTGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTTAGGGTCTTCA 573726 Query 43171 CAAAGATTTGCAT 43183 | ||||| ||||| Sbjct 573725 CGAAGATCTGCAT 573713 >seq199 Length=3010087 Score = 89.7 bits (98), Expect = 6e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| || | |||||| |||||| ||||||||||||||||||||| ||||| ||||||| Sbjct 2423010 CTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCACTA 2423069 Query 60126 TACTACCGAGGA 60137 ||||| |||||| Sbjct 2423070 TACTAACGAGGA 2423081 >seq2164 Length=79412 Score = 87.8 bits (96), Expect = 2e-12 Identities = 144/208 (69%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 42974 CACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATC 43033 |||||| |||| ||| || || || ||||| | || | |||||| | | | || Sbjct 52108 CACCAAGTGCAGGGTGGAGTCTTTCTGGATATTATCGTCTGACAGAGTATGGCCATTTTC 52049 Query 43034 TAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 43093 ||||| || || | || || || ||||||||||| | ||| | | ||||||||| Sbjct 52048 CAGCTGTTTGCCCACAAAAATCAGACGCTGCTGGTCAGGCGGGATACCCTCCTTGTCTTG 51989 Query 43094 GATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTT 43153 |||||| ||||| || | ||||| || | || || | || |||||||| || Sbjct 51988 GATTTTGGCTTTGACATTCTCAGTAGTGTCACTGGGCTCGACCTTGAGGGTGATGGTCTT 51929 Query 43154 GCCCGTTAGCGTCTTTACAAAGATTTGC 43181 |||||| || ||||| |||||||| ||| Sbjct 51928 GCCCGTCAGGGTCTTCACAAAGATCTGC 51901 >seq33 Length=6086033 Score = 86.0 bits (94), Expect = 7e-12 Identities = 149/214 (70%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 42971 CAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTC 43030 |||||| | ||| | ||| |||||||||||| ||||| |||| || ||| || | || Sbjct 2214783 CAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTGCGTCCATC 2214842 Query 43031 ATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTC 43090 || || ||||| ||||| ||||| |||| |||||| || | || | | ||||| || Sbjct 2214843 TTCCAGTTGCTTGCCAGCAAATATCAGTCTCTGCTGATCAGGAGGAATTCCTTCCTTATC 2214902 Query 43091 CATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGG 43149 | ||| | |||| || | | ||| || | | ||| || |||| ||||||| Sbjct 2214903 C-TGAATCTTTGCCTTTACATTTTCCATTGTACCCGAGGGTTCAACCTCGAGAGTGATGG 2214961 Query 43150 TTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 | || ||||| || || || || || || ||||| Sbjct 2214962 TCTTCCCCGTAAGGGTTTTCACGAAAATCTGCAT 2214995 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571789773926040