Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Odobenus_20rosmarus_20divergens_20[refseq_20GCF_5F000321225.1_202013 -01-16] 3,893 sequences; 2,400,150,193 total letters Query= NC_002520.1 Length=232392 Score E Sequences producing significant alignments: (Bits) Value seq33 89.7 8e-13 seq59 87.8 3e-12 seq75 84.2 3e-11 >seq33 Length=6086033 Score = 89.7 bits (98), Expect = 8e-13 Identities = 104/138 (75%), Gaps = 2/138 (1%) Strand=Plus/Plus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTC-TTTAGATATATTATAATCTGA 146109 ||||| | |||||| || || | ||| | ||| || || ||| || || || || || || Sbjct 2214769 CCACCACGAAGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGA-ATGTTGTAGTCAGA 2214827 Query 146110 AAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGG 146169 | ||| | | ||| || | ||| || |||||||| |||| ||| |||||||| ||||| Sbjct 2214828 CAAAGTGCGTCCATCTTCCAGTTGCTTGCCAGCAAATATCAGTCTCTGCTGATCAGGAGG 2214887 Query 146170 AATTCCTTCTTTATCTTG 146187 ||||||||| ||||| || Sbjct 2214888 AATTCCTTCCTTATCCTG 2214905 >seq59 Length=2579055 Score = 87.8 bits (96), Expect = 3e-12 Identities = 103/137 (75%), Gaps = 2/137 (1%) Strand=Plus/Plus Query 146052 CACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTC-TTTAGATATATTATAATCTGAA 146110 |||| | |||||| || || | ||| | ||| || || ||| || || || || || || Sbjct 1130453 CACCACGAAGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGA-ATGTTGTAGTCAGAC 1130511 Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170 | ||| | | ||| || | ||| || |||||||| |||| ||| |||||||| |||||| Sbjct 1130512 AAAGTGCGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTCTGCTGATCAGGAGGA 1130571 Query 146171 ATTCCTTCTTTATCTTG 146187 |||||||| ||||| || Sbjct 1130572 ATTCCTTCCTTATCCTG 1130588 >seq75 Length=4930459 Score = 84.2 bits (92), Expect = 3e-11 Identities = 103/138 (75%), Gaps = 2/138 (1%) Strand=Plus/Plus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTC-TTTAGATATATTATAATCTGA 146109 ||||| | ||||||||| || | ||| | ||| || || ||| || || || || || || Sbjct 2283651 CCACCACGAAGTCTTAACACAAGATGAAGAGTGGACTCCTTTTGA-ATGTTGTAGTCAGA 2283709 Query 146110 AAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGG 146169 | ||| | | ||| | | ||| || |||||||| ||||| || ||||||| ||||| Sbjct 2283710 CAAAGTGCGTCCATCTCCCAGTTGCTTGCCAGCAAAGATCAACCTCTGCTGATGAGGAGG 2283769 Query 146170 AATTCCTTCTTTATCTTG 146187 ||||||||| ||||| || Sbjct 2283770 AATTCCTTCCTTATCCTG 2283787 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 743490218146560