Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Odobenus_20rosmarus_20divergens_20[refseq_20GCF_5F000321225.1_202013
-01-16] 3,893 sequences; 2,400,150,193 total letters
Query= NC_002593.1
Length=100999
Score E
Sequences producing significant alignments: (Bits) Value
seq314 113 3e-20
seq85 113 3e-20
seq949 107 1e-18
seq47 105 4e-18
seq1198 95.1 8e-15
seq1114 95.1 8e-15
seq199 86.0 4e-12
seq128 82.4 5e-11
>seq314
Length=2398313
Score = 113 bits (124), Expect = 3e-20
Identities = 159/218 (73%), Gaps = 4/218 (2%)
Strand=Plus/Plus
Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237
||||||| ||| | || |||||||| || || ||||| ||||| |||| | ||
Sbjct 2323437 AGCACCAAGTGCAGGGTGGACTCTTTCTGGATATTATAGTCTGACAGAGTACGGCCATCT 2323496
Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTC-GACGGGCACGCTCTCCTTGTC 34296
|||| ||| ||||| || ||||| || ||||||||||| | |||| | || |||||||||
Sbjct 2323497 TCCAGCTGTTTGCCCGCAAAAATCAGACGCTGCTGGTCAGGCGGG-ATGCCCTCCTTGTC 2323555
Query 34297 GGCTATCTTTTGCTTT-AGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGG 34355
|| ||| ||||| | || | || | || | | ||||| || | |||||||
Sbjct 2323556 TTGGAT-TTTGGCTTTGACATTCTCAATAGTGTCACTGGGCTCGACCTCGAGGGTGATGG 2323614
Query 34356 TTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATCGCT 34393
| ||||| || || || |||||||||||||||||| ||
Sbjct 2323615 TCTTGCCCGTCAGGGTCTTCACAAAGATCTGCATCTCT 2323652
>seq85
Length=4131313
Score = 113 bits (124), Expect = 3e-20
Identities = 159/218 (73%), Gaps = 4/218 (2%)
Strand=Plus/Plus
Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237
||||||| ||| | || |||||||| || || ||||| ||||| |||| | ||
Sbjct 1818199 AGCACCAAGTGCAGGGTGGACTCTTTCTGGATATTATAGTCTGACAGAGTACGGCCATCT 1818258
Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTC-GACGGGCACGCTCTCCTTGTC 34296
|||| ||| ||||| || ||||| || ||||||||||| | |||| | || |||||||||
Sbjct 1818259 TCCAGCTGTTTGCCCGCAAAAATCAGACGCTGCTGGTCAGGCGGG-ATGCCCTCCTTGTC 1818317
Query 34297 GGCTATCTTTTGCTTT-AGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGG 34355
|| ||| ||||| | || | || | || | | ||||| || | |||||||
Sbjct 1818318 TTGGAT-TTTGGCTTTGACATTCTCAATAGCGTCACTGGGCTCGACCTCGAGGGTGATGG 1818376
Query 34356 TTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATCGCT 34393
| ||||| || || || |||||||||||||||||| ||
Sbjct 1818377 TCTTGCCTGTCAGGGTCTTCACAAAGATCTGCATCTCT 1818414
>seq949
Length=596474
Score = 107 bits (118), Expect = 1e-18
Identities = 151/212 (71%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237
|| |||||||| | ||| |||||||| |||||||| || || || ||| | ||
Sbjct 262169 AGAACCAGGTGGAGAGTTGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCT 262228
Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297
|||| ||||||||| || || || |||| ||||||||| ||| | || ||| || ||
Sbjct 262229 TCCAGCTGCTTGCCAGCAAAGATAAGCCTCTGCTGGTCAGGGGGGATGCCCTCTTTATCT 262288
Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357
||||| ||| | || | || | || | | || || |||| ||||||||
Sbjct 262289 TGGATCTTGGCCTTCACATTTTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTC 262348
Query 34358 TTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|||||||| || || |||||||||||||||||
Sbjct 262349 TTGCCGGTCAGGGTCTTCACAAAGATCTGCAT 262380
>seq47
Length=4803410
Score = 105 bits (116), Expect = 4e-18
Identities = 151/213 (71%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 34177 CAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTC 34236
||| |||||||| | ||| || ||||| ||||||||||| ||||| || ||||
Sbjct 4289651 CAGGACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCGTC 4289710
Query 34237 GTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTC 34296
|||| |||||| || || || || | || ||||||||| ||| | || |||||||||
Sbjct 4289711 CTCCAGCTGCTTCCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTC 4289770
Query 34297 GGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGT 34356
||||| ||| | || | || | || | | || || |||| ||||||||
Sbjct 4289771 CTGGATCTTCGCCTTGACATTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGT 4289830
Query 34357 TTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|||||||| | || ||||| |||||||||||
Sbjct 4289831 CTTGCCGGTCAAGGTCTTCACGAAGATCTGCAT 4289863
Score = 100 bits (110), Expect = 2e-16
Identities = 150/213 (70%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 34177 CAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTC 34236
||| |||||||| | ||| || ||||| ||||||||||| ||||| || ||||
Sbjct 4289423 CAGGACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCGTC 4289482
Query 34237 GTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTC 34296
|||| ||| || || || || || | || ||||||||| ||| | || |||||||||
Sbjct 4289483 CTCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTC 4289542
Query 34297 GGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGT 34356
||||| ||| | || | || | || | | || || |||| ||||||||
Sbjct 4289543 CTGGATCTTCGCCTTGACATTCTCGATGGTGTCACTGGGCTCCACCTCCAGAGTGATGGT 4289602
Query 34357 TTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|||||||| | || ||||| |||||||||||
Sbjct 4289603 CTTGCCGGTCAAGGTCTTCACGAAGATCTGCAT 4289635
Score = 100 bits (110), Expect = 2e-16
Identities = 150/213 (70%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 34177 CAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTC 34236
||| |||||||| | ||| || ||||| ||||||||||| ||||| || ||||
Sbjct 4289879 CAGGACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCGTC 4289938
Query 34237 GTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTC 34296
|||| |||||| || || || || | || ||||||||| ||| | || ||| |||||
Sbjct 4289939 CTCCAGCTGCTTCCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGGATGCCCTCTTTGTC 4289998
Query 34297 GGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGT 34356
||||| ||| | || | || | || | | || || |||| ||||||||
Sbjct 4289999 CTGGATCTTCGCCTTGACATTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGT 4290058
Query 34357 TTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|| ||||| | || |||||||||||||||||
Sbjct 4290059 CTTACCGGTCAAGGTCTTCACAAAGATCTGCAT 4290091
>seq1198
Length=804178
Score = 95.1 bits (104), Expect = 8e-15
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
|| || | ||| | ||| |||||||| | || |||||||| ||||| || || ||
Sbjct 573711 CCACCCCTCAGGCGCAGAACCAGGTGCAGGGTCGACTCTTTCTGGATGTTATAATCAGAA 573652
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282
|| || | || |||| |||||||||||| |||||||||| ||||||||| |||
Sbjct 573651 AGAGTGTGGCCATCTTCCAGCTGCTTGCCTGCAAAAATGAGCCTCTGCTGGTCAGGGGGG 573592
Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342
| || || || || ||||| ||| | || | || | || | | || ||
Sbjct 573591 ATGCCCTGTTTATCTTGGATCTTGGCCTTCACATTTTCGATGGTGTCACTGGGCTCTACC 573532
Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|| | ||||||| |||||||| || || ||||| |||||||||||
Sbjct 573531 TCTAGGTTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 573485
>seq1114
Length=1661397
Score = 95.1 bits (104), Expect = 8e-15
Identities = 148/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237
|| |||||||| | ||| |||||||| |||||||| || || || ||| | ||
Sbjct 1502917 AGAACCAGGTGGAGAGTTGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCT 1502976
Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297
|||| ||||||||| || || || || | ||||||||| ||| | || ||| || ||
Sbjct 1502977 TCCAGCTGCTTGCCAGCAAAGATAAGTCTCTGCTGGTCAGGGGGGATGCCCTCTTTATCT 1503036
Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357
||||| ||| | | | | | ||| | | || || |||| ||||||||
Sbjct 1503037 TGGATCTTCGCCTTCACGTTTTCAGTGGTATCACTGGGCTCCACCTCCAGGGTGATGGTC 1503096
Query 34358 TTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|||||||| || || ||||| |||||||||||
Sbjct 1503097 TTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 1503128
>seq199
Length=3010087
Score = 86.0 bits (94), Expect = 4e-12
Identities = 153/218 (70%), Gaps = 4/218 (2%)
Strand=Plus/Minus
Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237
||||||| ||| | || |||||||| || || ||||| ||| | |||| | ||
Sbjct 689108 AGCACCAAGTGCAGGGTGGACTCTTTCTGGATATTATAGTCTGACCGAGTACGGCCATCT 689049
Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTC-GACGGGCACGCTCTCCTTGTC 34296
|||| ||| ||||| || ||| | || | ||||||||| | |||| | || |||||||||
Sbjct 689048 TCCAGCTGTTTGCCCGCAAAAGTCAGACTCTGCTGGTCAGGCGGG-ATGCCCTCCTTGTC 688990
Query 34297 GGCTATCTTTTGCTTT-AGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGG 34355
|| ||| ||||| | || | | | || | | || || || | |||||||
Sbjct 688989 TTGGAT-TTTGGCTTTGACATTCTCAGTGGTGTCACTGGGCTCAACCTCGAGGGTGATGG 688931
Query 34356 TTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATCGCT 34393
| ||||| || || || |||||| ||||||||||| ||
Sbjct 688930 TCTTGCCCGTCAGGGTCTTCACAGAGATCTGCATCTCT 688893
>seq128
Length=2980057
Score = 82.4 bits (90), Expect = 5e-11
Identities = 153/218 (70%), Gaps = 5/218 (2%)
Strand=Plus/Plus
Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237
||||||| ||| | || |||||||| || || ||||| ||||| |||| | ||
Sbjct 204318 AGCACCAAGTGCAGGGTGGACTCTTTCTGGATATTATAGTCTGACAGAGTACGGCCATCT 204377
Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTC-GACGGGCACGCTCTCCTTGTC 34296
| || ||| ||||| || ||||| || |||||||||| | |||| | || |||||||||
Sbjct 204378 TTCAGCTGTTTGCCCGCAAAAATCAGATGCTGCTGGTCAGGCGGG-ATGCCCTCCTTGTC 204436
Query 34297 GGCTATCTTTTGCTTT-AGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGG 34355
|| ||| ||||| | || | || | || | | || || || | |||| ||
Sbjct 204437 TTGGAT-TTTGGCTTTGACATTCTCAATAGTGTCACTGGGCTCAACCTCGAGGGTGACGG 204495
Query 34356 TTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATCGCT 34393
| | ||| | || || |||||||||||||||||| ||
Sbjct 204496 TCTCGCCT-TCAGGGTCTTCACAAAGATCTGCATCTCT 204532
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 323056671546080
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