Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Odobenus_20rosmarus_20divergens_20[refseq_20GCF_5F000321225.1_202013 -01-16] 3,893 sequences; 2,400,150,193 total letters Query= NC_002665.1 Length=108873 Score E Sequences producing significant alignments: (Bits) Value seq311 1727 0.0 seq58 206 2e-48 seq195 84.2 2e-11 >seq311 Length=3906238 Score = 1727 bits (1914), Expect = 0.0 Identities = 1412/1721 (82%), Gaps = 72/1721 (4%) Strand=Plus/Plus Query 107084 TCCCAGCATGACTAGCTGGTTTGCAGCATCAGGTTACAGATGTCCATCCACAAG------ 107137 ||||||| ||| | ||| ||||| || |||| ||| ||| || || ||||| Sbjct 2253979 TCCCAGCGTGAATGGCTTGTTTGTAGGGTCAGATTATAGACCTCTGTCAACAAGCCAGGG 2254038 Query 107138 -------GGTCTTAGGCAGGACTTGACTGAGGATATTTGTCTATAGAAGACATCTATCTT 107190 | || |||||||| |||||||||||||||||||||| |||||| || Sbjct 2254039 ATAAGAGGTTCCTAGGCAGGTCTTGACTGAGGATATTTGTCTAGAGAAGAAAT------- 2254091 Query 107191 TACCATCACTCTGGAGTTGAACTTGATGTT--------------CTGGATTAGTTTGTAA 107236 | | || ||||||||| ||||||||| | || | ||||||||| Sbjct 2254092 ----ACCCCTTTGGAGTTGAGCTTGATGTTTCTGTGAATACATTCAGGGTCAGTTTGTAA 2254147 Query 107237 TTAAAGGCATTTTGTTCTGTCCAAGGATCTCCTCC---TCCACCTTGCCTGTGCCCAAAC 107293 || ||||||||||||||||||||||||| | ||| ||| |||| ||||||||| ||| Sbjct 2254148 TTGAAGGCATTTTGTTCTGTCCAAGGATTCCATCCATCTCCTCCTTCCCTGTGCCCCAAC 2254207 Query 107294 TCTCCTGATCTCCCATCCCATGAAGATGGCTGGGTGGAAGAAGAAGC--TTT--GCCGGG 107349 ||| ||| | || ||| || ||||||||| | ||||||||||||||| ||| || | | Sbjct 2254208 TCTGCTGGTTTCTCATTCCGTGAAGATGGTTTGGTGGAAGAAGAAGCCCTTTAAGCAGCG 2254267 Query 107350 GACATCATCTGTGGGCCCTGGGCTGCTATATGCTGCTGGCCGTTGTTTCTCTGAGACTTT 107409 ||| |||||||||||||||||||||||||||||||| || ||| ||||||| ||| Sbjct 2254268 ----TCACCTGTGGGCCCTGGGCTGCTATATGCTGCTGGCTGTGGTTGCTCTGAGGTTTT 2254323 Query 107410 CCCTCAGGTTTAAATGTGATGTAGATTCCTTGGATCTGGAGTCCAGGGACTTCCAGAGTC 107469 | |||||||| |||||||| | || ||| |||||||||||||||||||||| ||| | Sbjct 2254324 CTCTCAGGTTGAAATGTGACTTTGAGTCCCTGGATCTGGAGTCCAGGGACTTTTGGAGCC 2254383 Query 107470 AGCACTGTAGGGACATGTTGTACAATAGCCTGAAGCTGCCAGCAAAGAGATCCATCAACT 107529 |||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| Sbjct 2254384 AGCACTGTAGGGACATCTTGTACAAGTCCCTGAAGCTGCCAGCAAAGAGATCCATCAACT 2254443 Query 107530 GTTCTGGGATCACGCGAGGGGACCAGGAAGCAGTGGTCCAGGCCCTCCTAGACAACCTGG 107589 ||||||| |||| |||||||||||| | |||||| |||| ||||| |||||||||| Sbjct 2254444 GTTCTGGAATCATCCGAGGGGACCAGCAGGCAGTGACGGAGGCTCTCCTGGACAACCTGG 2254503 Query 107590 AAGTGAAGAAAAAGCGGTCGCCTCTCACTGGCACCTATTACCTCAACATAACCAGAGACT 107649 | || ||||| |||||| ||| |||| | |||| | ||||| ||||| |||||||||| Sbjct 2254504 AGGTCAAGAAGAAGCGGGAGCCCTTCACAGACACCGACTACCTTAACATGACCAGAGACT 2254563 Query 107650 GTGAGCGCTTCAAGGCCCAAAGGAAGTTCATACAGTTCCCACTGAGTAAAGAAGAGCTAG 107709 |||||| ||| |||||| ||||||||||||||| |||||| ||||| ||| ||||| ||| Sbjct 2254564 GTGAGCACTTTAAGGCCGAAAGGAAGTTCATACGGTTCCCTCTGAGCAAAAAAGAGTTAG 2254623 Query 107710 ACTTCCCCATTGCCTACTCGATGGTGGTCCATGAGAAGATTGAAAACTTTGAACGGCTGC 107769 ||||||| ||||| ||||| ||||||||||| |||||||| || ||||| ||| | |||| Sbjct 2254624 ACTTCCCTATTGCATACTCTATGGTGGTCCACGAGAAGATCGAGAACTTCGAAAGACTGC 2254683 Query 107770 TGCGAGCCGTGTATGCCCCTCAGAACATATACTGTGTCCACGTGGATGTGAAGTCCCCAG 107829 ||||||| ||||||||||||||||||||||||||||||||||||||| ||| ||||||| Sbjct 2254684 TGCGAGCTTTGTATGCCCCTCAGAACATATACTGTGTCCACGTGGATGAGAAATCCCCAG 2254743 Query 107830 AGACTTTCAAAGAGGCGGTCAAGGCCATTATTTCCTGCTTCCCCAATGTCTTCATGGCCA 107889 | |||||||||||||| |||||||| ||| | || |||||||| ||||||||||| |||| Sbjct 2254744 AAACTTTCAAAGAGGCAGTCAAGGCGATTGTGTCGTGCTTCCCAAATGTCTTCATAGCCA 2254803 Query 107890 GTAAGTTGGTCCCGGTGGTTTATGCCTCCTGGTCCAGAGTGCAAGCTGACCTGAACTGTA 107949 |||||||||| | |||||||||||||||||||||||| ||||| |||||||| ||||||| Sbjct 2254804 GTAAGTTGGTTCGGGTGGTTTATGCCTCCTGGTCCAGGGTGCAGGCTGACCTAAACTGTA 2254863 Query 107950 TGGAAGACTTGCTCCAGAGCTCAGTGCCATGGAAGTACTTACTGAATACATGCGGGACAG 108009 |||| |||||||||||||||||||||||||||| ||||||||||||||||| ||||| | Sbjct 2254864 TGGAGGACTTGCTCCAGAGCTCAGTGCCATGGAGATACTTACTGAATACATGTGGGACGG 2254923 Query 108010 ACTTCCCCATAAAGACCAATGCCGAGATGGTCCTGGCCCTCAAGATGTTGAAGGGTAAGA 108069 |||| || |||||||||||||||||||||||||||||||||||||||||||| || |||| Sbjct 2254924 ACTTTCCTATAAAGACCAATGCCGAGATGGTCCTGGCCCTCAAGATGTTGAATGGGAAGA 2254983 Query 108070 ACAGTATGGAGTCTGAGGTACCTTCTGAGTCCaaaaaaaaTCGCTGGAAATACCGCTATG 108129 ||||||||||||| || ||||| |||||| ||||| |||||||| ||| | ||||| Sbjct 2254984 ACAGTATGGAGTCAGAAATACCTACTGAGTACAAAAGGTCTCGCTGGACATATCACTATG 2255043 Query 108130 AGGTGACAGACACACTGTACCCTACCAGCAAGATGAAGGACCCTCCCCCTGATAATTTAC 108189 |||||||||||||| || || ||||||||||||||||| |||||||| |||||| ||| Sbjct 2255044 AGGTGACAGACACATTGCACATAACCAGCAAGATGAAGGATCCTCCCCCGGATAATATAC 2255103 Query 108190 CCATGTTCACAGGGAATGCCTATTTTGTGGCCTCTCGAGCCTTTGTCCAACATGTCTTAG 108249 | ||||||||||||||||||||| ||||||| ||||||| ||||||||| || ||||| | Sbjct 2255104 CTATGTTCACAGGGAATGCCTATATTGTGGCTTCTCGAGACTTTGTCCAGCACGTCTTGG 2255163 Query 108250 ACAACCCTAAATCCCAAAGACTGGTTGAATGGGTCAAAGACACCTATAGCCCCGACGAAC 108309 | ||||| || |||||||||||| | || ||||| |||||||||||||||||||| |||| Sbjct 2255164 AGAACCCCAAGTCCCAAAGACTGATCGAGTGGGTGAAAGACACCTATAGCCCCGATGAAC 2255223 Query 108310 ACCTCTGGGCCACCCTTCAGCGTGCTCCGTGGATGCCTGGCTCTGTTCCTAGCCACCCCA 108369 | || |||||||||||||||||||| || |||||||| || ||| |||| |||||||| Sbjct 2255224 ATCTGTGGGCCACCCTTCAGCGTGCACCATGGATGCCGGGTTCTATTCCCTACCACCCCA 2255283 Query 108370 AGTATCACATCTCAGACATGACTGCCATCGCCAGGCTCGTCAAGTGGCAGTACCACGAGG 108429 ||| ||||||||| |||||||| ||||| |||||||| ||||||||||| ||| |||| Sbjct 2255284 AGTTTCACATCTCCGACATGACAGCCATTGCCAGGCTGGTCAAGTGGCAAGGCCATGAGG 2255343 Query 108430 GAGATGTCAGCATGGGGGCGCCTTATGCACCCTGCTCTGGAATCCATCGGAGGGCCATCT 108489 |||| |||| |||||||| ||||||||||| |||||||||| ||| | | || | ||| Sbjct 2255344 GAGACATCAGTATGGGGGCACCTTATGCACCTTGCTCTGGAACCCACCAGCGGTCTGTCT 2255403 Query 108490 GCATTTACGGGGCCGGGGACCTGTACTGGATTCTCCAGAACCATCACCTCTTGGCAAACA 108549 | |||| ||| | ||||||||| | |||||||| || ||||||||||| ||||| |||| Sbjct 2255404 GTGTTTATGGGACGGGGGACCTGCATTGGATTCTTCAAAACCATCACCTGTTGGCTAACA 2255463 Query 108550 AGTTTGACCCGAGGGTGGATGATAACGTCCTGCAGTGCTTAGAAGAGTACCTACGTCATA 108609 |||||||||| | ||||||||| || || || |||||||||||||||| | ||||| ||| Sbjct 2255464 AGTTTGACCCAAAGGTGGATGACAATGTTCTTCAGTGCTTAGAAGAGTGCTTACGTTATA 2255523 Query 108610 AGGCCATCTATGGGACTGAACTTTGAGCTGC------------------ACTGTGGGCCA 108651 |||||||||||||||||||||| |||| | | ||||||| || Sbjct 2255524 AGGCCATCTATGGGACTGAACTCTGAGATACCTTATCAGAGAAGTGCTACCTGTGGGGCA 2255583 Query 108652 GGGAC-TGTGCCAACATGCCCAGGGCGTACTGGTACTGTGTGGGGTGGGGGACGAGGGCT 108710 || || ||||| ||||||||||||| || |||| || ||||||||||| || ||||| Sbjct 2255584 GGAACATGTGCAAACATGCCCAGGGGGTGCTGGGAC--AGTGGGGTGGGGCACCGGGGCT 2255641 Query 108711 GTGGAATCCATGGCATCCCCCAGGGTCAGAGGGCTGCTTTG 108751 |||||||| |||||||||| | ||||| ||| |||| || Sbjct 2255642 CTGGAATCCTTGGCATCCCCAA--GTCAGGGGGTTGCTATG 2255680 >seq58 Length=5701780 Score = 206 bits (228), Expect = 2e-48 Identities = 592/898 (66%), Gaps = 47/898 (5%) Strand=Plus/Minus Query 107688 CCACTGAGTAAAGAAGAGCTAGACTTCCCCATTGCCTACTCGATGGTGGTCCATGAGAAG 107747 || || |||||||||||| ||| || ||||| || || || || ||||| ||| | || Sbjct 3157933 CCCCTTAGTAAAGAAGAGGAAGAATTTCCCATAGCATATTCTATAGTGGTTCATCACAAA 3157874 Query 107748 ATTGAAAACTTTGAACGGCTGCTGCGAGCCGTGTATGCCCCTCAGAACATATACTGTGTC 107807 || |||| |||| |||| ||| ||||| | ||| |||||||| | ||||| | Sbjct 3157873 ATCGAAATGCTTGACAGGCTCCTGAGAGCCATTTATATGCCTCAGAATTTCTACTGCATT 3157814 Query 107808 CACGTGGATGTGAAGTCCCCAGAGACTTTCAAAGAGGCGGTCAAGGCCATTATTTCCTGC 107867 |||||||| ||||| || | || | ||||| | | ||| |||||| Sbjct 3157813 CACGTGGACAGAAAGTCAGAGGATTCCTTTTTGGCCGCGGTGATCGGCATCGCATCCTGC 3157754 Query 107868 TTCCCCAATGTCTTCATGGCCAGTAAGTTGGTCCCGGTGGTTTATGCCTCCTGGTCCAGA 107927 ||| |||||||| |||||||| || ||| ||||| |||||||| ||| | Sbjct 3157753 TTCAGTAATGTCTTTGTGGCCAGTCAGCTGGAGAGTGTGGTGTATGCCTCGTGGAGTCGG 3157694 Query 107928 GTGCAAGCTGACCTGAACTGTATGGAAGACTTGCTCCAGAGCTCAGTGCCA--TGGAAGT 107985 || || || ||||| ||||| ||| ||||| | || ||| | | ||||| ||||||| Sbjct 3157693 GTTCAGGCCGACCTCAACTGCATGCAAGACCT-CTACAG-GATGAGTGCAGACTGGAAGT 3157636 Query 107986 ACTTACTGAATACATGCGGGACAGACTTCCCCATAAAGACCAATGCCGAGATGGTCCTGG 108045 |||| | ||| ||||| | || || ||||| || ||||| || || |||| | Sbjct 3157635 ACTTGATAAATCTTTGCGGTATGGATTTTCCCATTAAAACCAACTTGGAAATTGTCCGGA 3157576 Query 108046 CCCTCAAGATGTTGAAGGGTAAGAACAGTATGGAGTCTGAGGTA---CCTTCTGAGTCCa 108102 |||||| | | | |||| | |||| | || ||||| | || || | | Sbjct 3157575 AGCTCAAGTCGCTAATGGGTGAAAACAACCTAGAAACTGAGAGAATGCCATCCAAT---A 3157519 Query 108103 aaaaaaaTCGCTGGAAA--------TACCGCT----ATG---AGGTGACAGACACACTGT 108147 ||||| | | |||||| ||| | | ||| || |||| ||||| | Sbjct 3157518 AAAAAGAAAGGTGGAAAAAGCATTATACAGTTGTTAATGGGAAGCTGACGAACACAGGG- 3157460 Query 108148 ACCCTACCAGCAAGATGAAGGACCCTCCCCCTGATAATTTACCCATGTTCACAGGGAATG 108207 || ||| ||| | |||||| | || | |||| |||| |||| | || Sbjct 3157459 -----ACTGACAAAATGCA---CCCTCCTCTCGAAAC---ACCCCTGTTTTCAGGCAGTG 3157411 Query 108208 CCTATTTTGTGGCCTCTCGAGCCTTTGTCCAACATGTCTTAGACAACCCTAAATCCCAAA 108267 |||||||||||| | | | | ||| |||| |||| || ||| ||||| Sbjct 3157410 CCTATTTTGTGGTCAGTAGGATGTATGTGGGGTATGTGCTAGAGAATGAAAAAATCCAAA 3157351 Query 108268 GACTGGTTGAATGGGTCAAAGACACCTATAGCCCCGACGAACACCTCTGGGCCACCCTTC 108327 | | || |||| ||||| || || ||||| || || | ||||||||||| ||| Sbjct 3157350 AGTTTATGGAGTGGGCTAAAGATACATACAGCCCAGATGAGTATCTCTGGGCCACTATTC 3157291 Query 108328 AGCGTGCTCCGTGGATG--CCTGGCTC-TGTTCCT--AGCCACCCCAAGTATCACATCTC 108382 || | | ||| | |||| || ||||| | |||| ||||| |||||| |||| || Sbjct 3157290 AGAG-GATCCCT-GATGTCCCGGGCTCATTGTCCTTAAGCCA---GAAGTATGACATGTC 3157236 Query 108383 AGACATGACTGCCATCGCCAGGCTCGTCAAGTGGCAGTACCACGAGGGAGATGTCAGCAT 108442 |||||| ||| || || ||| | ||||| ||||||||| |||||| ||||| || Sbjct 3157235 TGACATGCATGCAATTGCAAGGTTTGTCAAATGGCAGTACTTCGAGGGGGATGTTTCCAA 3157176 Query 108443 GGGGGCGCCTTATGCACCCTGCTCTGGAATCCATCGGAGGGCCATCTGCATTTACGGGGC 108502 ||| || || || |||||||| ||| ||||| | | | | ||| | | ||| || Sbjct 3157175 GGGTGCCCCCTACCCACCCTGCAGTGGGGTCCATGTGCGTTCTGTGTGCGTGTTCGGAGC 3157116 Query 108503 CGGGGACCTGTACTGGATTCTCCAGAACCATCACCTCTTGGCAAACAAGTTTGACCCG 108560 |||||| || ||||||| |||| || || ||| | || || |||||||||||| || Sbjct 3157115 AGGGGACTTGAACTGGATGCTCCGCAAGCACCACTTGTTTGCCAACAAGTTTGACACG 3157058 >seq195 Length=3459827 Score = 84.2 bits (92), Expect = 2e-11 Identities = 173/251 (69%), Gaps = 10/251 (4%) Strand=Plus/Minus Query 107782 ATGCCCCTCAGAACATATACTGTGTCCACGTGGATGTGAAGTCCCCAGAGACTTTCAAAG 107841 ||||||| | || | ||||| || |||||||||| |||| | |||| || || |||| Sbjct 1858592 ATGCCCC--AAAATGTCTACTGCGTTCACGTGGATGAGAAGGCGACAGATACATTTAAAG 1858535 Query 107842 AGGCGGTCAAGGCCATTATTTC-CTGCTTCCCCAATGTCTTCATGGCCAGTAAGTTGGTC 107900 | || || ||| | |||| | ||||||||| |||| ||| |||| ||| ||| Sbjct 1858534 ATGCAGTAAAG-CAATTACTGAGCTGCTTCCCAAATGCTTTCCTGGCTTCCAAGATGGAG 1858476 Query 107901 CCGGTGGTTTATGCCTCCTGGTCCAGAGTGCAAGCTGACCTGAACTGTATGGAAGACTTG 107960 || || || |||| ||||| | || |||||||||||||| || ||||| Sbjct 1858475 CCAGTTGTCTATGGGGGGATCTCCAGGCTCCAGGCTGACCTGAACTGCATCAAAGAC--- 1858419 Query 107961 CTC-CAGAG--CTCAGTGCCATGGAAGTACTTACTGAATACATGCGGGACAGACTTCCCC 108017 ||| ||| | | ||||| ||||||||| | || | || ||| |||||||||| Sbjct 1858418 CTCACAGCGTCCGACGTGCCCTGGAAGTACGCCATCAACATGTGTGGGCAAGACTTCCCC 1858359 Query 108018 ATAAAGACCAA 108028 | || ||||| Sbjct 1858358 CTGAAAACCAA 1858348 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 348252276060282