Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Odobenus_20rosmarus_20divergens_20[refseq_20GCF_5F000321225.1_202013 -01-16] 3,893 sequences; 2,400,150,193 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq472 100 2e-16 >seq472 Length=2018034 Score = 100 bits (110), Expect = 2e-16 Identities = 206/302 (68%), Gaps = 6/302 (2%) Strand=Plus/Minus Query 20068 GTATTTTGGAAAGGCGTTGTTGAAGAGTTATTATGGTTTATTAAAGGATCAACAAATTCT 20127 ||||| || || || ||| | || |||||| | |||||||| || ||||| | |||| || Sbjct 353156 GTATTCTGAAAGGGTGTTTTGGAGGAGTTACTGTGGTTTATCAAGGGATCTAAAAATACT 353097 Query 20128 ACCGAGCTTGTAGAAAAAGGAGTTAAGATTTGGAGCGCACATGGATC-TAAGCAATTTTT 20186 | || || || ||||| | || ||| || ||| || | || | || || Sbjct 353096 AAGGAACTGTCTTCCAAGGGAGTGACAATCTGGGATGCCAATGCCTCCTGAG-ACTTCTT 353038 Query 20187 ACACAGCAATGGATTTGACAACCGTCAAGAGGGGGATTTGGGTCCTGTGTATGGATTTCA 20246 ||||| ||||| |||| | |||| |||||||| ||||| |||||||| | || Sbjct 353037 GGACAGCCTGGGATTCTCCAACAG--AAGAAGGGGATTTAGGTCCAGTGTATGGCTCGCA 352980 Query 20247 ATGGAGA--CATTTTGGAGCTGAATATGTTGACATGAACACAAATTATTTTGGACAAGGA 20304 |||||| ||||| || || ||||| ||| | || |||||| || |||||| Sbjct 352979 GTGGAGAAGCATTTGGGGGCAGAATACAAAAACAAAGATTCAGATTATTCAGGTCAAGGA 352920 Query 20305 GTAGATCAATTACAAAATGTTATTAATTTAATTAAAACGAACCCAAACGACAGAAGAATT 20364 ||||| ||| | ||||| || || |||| |||| || || || |||| |||||| Sbjct 352919 GTAGACCAACTGCAAAAGGTGTTTGGCACAATTGAAACCAAACCCAAGGACAAAAGAATC 352860 Query 20365 AT 20366 || Sbjct 352859 AT 352858 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399165060340885