Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Odobenus_20rosmarus_20divergens_20[refseq_20GCF_5F000321225.1_202013 -01-16] 3,893 sequences; 2,400,150,193 total letters Query= NC_003094.2 Length=130759 Score E Sequences producing significant alignments: (Bits) Value seq314 104 2e-17 seq85 100 2e-16 >seq314 Length=2398313 Score = 104 bits (114), Expect = 2e-17 Identities = 149/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 24832 ATGCAGATATTTGTTAAAACCTTAACCGGCAAAACGATAACCGTCGATGTCGAATCGAGC 24891 |||||||| ||||| || ||| | || ||||| || || ||| |||| ||||| | || Sbjct 2323648 ATGCAGATCTTTGTGAAGACCCTGACGGGCAAGACCATCACCCTCGAGGTCGAGCCCAGT 2323589 Query 24892 GACAGTGTAGAAACTGTTAAGGAAAAAATTGCTGCAAAAGAAGGCGTACCGGTTGACCAG 24951 |||| | | || | ||| || | ||||| | || || ||| | ||| ||||||| Sbjct 2323588 GACACTATTGAGAATGTCAAAGCCAAAATCCAAGACAAGGAGGGCATCCCGCCTGACCAG 2323529 Query 24952 CAACGTTTAATATATGCGGGCAAACAACTGGAAGATTCCATGACTATGAACGATTACAGC 25011 || ||| | || | |||||||||||| ||||||||| | ||| || || || | Sbjct 2323528 CAGCGTCTGATTTTTGCGGGCAAACAGCTGGAAGATGGCCGTACTCTGTCAGACTATAAT 2323469 Query 25012 ATACAGAAAGAGGCCACGCTTCATTTAGTG 25041 || ||||||||| |||| || || || ||| Sbjct 2323468 ATCCAGAAAGAGTCCACCCTGCACTTGGTG 2323439 >seq85 Length=4131313 Score = 100 bits (110), Expect = 2e-16 Identities = 148/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 24832 ATGCAGATATTTGTTAAAACCTTAACCGGCAAAACGATAACCGTCGATGTCGAATCGAGC 24891 |||||||| ||||| || ||| | || ||||| || || ||| |||| ||||| | || Sbjct 1818410 ATGCAGATCTTTGTGAAGACCCTGACAGGCAAGACCATCACCCTCGAGGTCGAGCCCAGT 1818351 Query 24892 GACAGTGTAGAAACTGTTAAGGAAAAAATTGCTGCAAAAGAAGGCGTACCGGTTGACCAG 24951 ||| | | || | ||| || | ||||| | || || ||| | ||| ||||||| Sbjct 1818350 GACGCTATTGAGAATGTCAAAGCCAAAATCCAAGACAAGGAGGGCATCCCGCCTGACCAG 1818291 Query 24952 CAACGTTTAATATATGCGGGCAAACAACTGGAAGATTCCATGACTATGAACGATTACAGC 25011 || ||| | || | |||||||||||| ||||||||| | ||| || || || | Sbjct 1818290 CAGCGTCTGATTTTTGCGGGCAAACAGCTGGAAGATGGCCGTACTCTGTCAGACTATAAT 1818231 Query 25012 ATACAGAAAGAGGCCACGCTTCATTTAGTG 25041 || ||||||||| |||| || || || ||| Sbjct 1818230 ATCCAGAAAGAGTCCACCCTGCACTTGGTG 1818201 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 418284153174560