Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Odobenus_20rosmarus_20divergens_20[refseq_20GCF_5F000321225.1_202013
-01-16] 3,893 sequences; 2,400,150,193 total letters
Query= NC_003094.2
Length=130759
Score E
Sequences producing significant alignments: (Bits) Value
seq314 104 2e-17
seq85 100 2e-16
>seq314
Length=2398313
Score = 104 bits (114), Expect = 2e-17
Identities = 149/210 (71%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 24832 ATGCAGATATTTGTTAAAACCTTAACCGGCAAAACGATAACCGTCGATGTCGAATCGAGC 24891
|||||||| ||||| || ||| | || ||||| || || ||| |||| ||||| | ||
Sbjct 2323648 ATGCAGATCTTTGTGAAGACCCTGACGGGCAAGACCATCACCCTCGAGGTCGAGCCCAGT 2323589
Query 24892 GACAGTGTAGAAACTGTTAAGGAAAAAATTGCTGCAAAAGAAGGCGTACCGGTTGACCAG 24951
|||| | | || | ||| || | ||||| | || || ||| | ||| |||||||
Sbjct 2323588 GACACTATTGAGAATGTCAAAGCCAAAATCCAAGACAAGGAGGGCATCCCGCCTGACCAG 2323529
Query 24952 CAACGTTTAATATATGCGGGCAAACAACTGGAAGATTCCATGACTATGAACGATTACAGC 25011
|| ||| | || | |||||||||||| ||||||||| | ||| || || || |
Sbjct 2323528 CAGCGTCTGATTTTTGCGGGCAAACAGCTGGAAGATGGCCGTACTCTGTCAGACTATAAT 2323469
Query 25012 ATACAGAAAGAGGCCACGCTTCATTTAGTG 25041
|| ||||||||| |||| || || || |||
Sbjct 2323468 ATCCAGAAAGAGTCCACCCTGCACTTGGTG 2323439
>seq85
Length=4131313
Score = 100 bits (110), Expect = 2e-16
Identities = 148/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 24832 ATGCAGATATTTGTTAAAACCTTAACCGGCAAAACGATAACCGTCGATGTCGAATCGAGC 24891
|||||||| ||||| || ||| | || ||||| || || ||| |||| ||||| | ||
Sbjct 1818410 ATGCAGATCTTTGTGAAGACCCTGACAGGCAAGACCATCACCCTCGAGGTCGAGCCCAGT 1818351
Query 24892 GACAGTGTAGAAACTGTTAAGGAAAAAATTGCTGCAAAAGAAGGCGTACCGGTTGACCAG 24951
||| | | || | ||| || | ||||| | || || ||| | ||| |||||||
Sbjct 1818350 GACGCTATTGAGAATGTCAAAGCCAAAATCCAAGACAAGGAGGGCATCCCGCCTGACCAG 1818291
Query 24952 CAACGTTTAATATATGCGGGCAAACAACTGGAAGATTCCATGACTATGAACGATTACAGC 25011
|| ||| | || | |||||||||||| ||||||||| | ||| || || || |
Sbjct 1818290 CAGCGTCTGATTTTTGCGGGCAAACAGCTGGAAGATGGCCGTACTCTGTCAGACTATAAT 1818231
Query 25012 ATACAGAAAGAGGCCACGCTTCATTTAGTG 25041
|| ||||||||| |||| || || || |||
Sbjct 1818230 ATCCAGAAAGAGTCCACCCTGCACTTGGTG 1818201
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 418284153174560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |