Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Odobenus_20rosmarus_20divergens_20[refseq_20GCF_5F000321225.1_202013
-01-16] 3,893 sequences; 2,400,150,193 total letters
Query= NC_003102.1
Length=139342
Score E
Sequences producing significant alignments: (Bits) Value
seq3 120 3e-22
seq314 113 4e-20
seq85 113 4e-20
seq33 105 6e-18
seq29 96.9 3e-15
seq530 95.1 1e-14
seq174 93.3 4e-14
seq59 91.5 1e-13
seq1198 87.8 2e-12
seq2164 86.0 6e-12
>seq3
Length=9835568
Score = 120 bits (132), Expect = 3e-22
Identities = 116/149 (78%), Gaps = 0/149 (0%)
Strand=Plus/Plus
Query 23048 ACCTCGTCTTTGGACGTGTACTCTACAATTTCGGTACATAGATTGCTACACTTTATCGTG 23107
||||| |||||| || |||||||| ||||| || || || ||||| || || |||||
Sbjct 160787 ACCTCATCTTTGCTGGTATACTCTACTATTTCTGTGCACAGGTTGCTGCATTTGATCGTT 160846
Query 23108 CCCAAATTGCTCTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTACGGCGTG 23167
|||| || ||||||||| || ||||| || ||||| ||||||||||||||||| ||
Sbjct 160847 CCCAGGTTCTGCTGGTTGCTCTTCCGATTACAGGAATCTTTGTAGAGCATGTACGGGGTA 160906
Query 23168 CCCGTCTCGACCTGCGACTCGATGATCGC 23196
|| ||||| ||| ||||| ||||| ||
Sbjct 160907 CCTGTCTCTGTCTGAGACTCAATGATGGC 160935
>seq314
Length=2398313
Score = 113 bits (124), Expect = 4e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||| || || || ||||| ||||| ||||| || |||||| |||| || || ||
Sbjct 2323648 ATGCAGATCTTTGTGAAGACCCTGACGGGCAAGACCATCACCCTCGAGGTCGAGCCCAGT 2323589
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| | | || | |||||| | ||| |||||||| ||| | ||||| ||||||
Sbjct 2323588 GACACTATTGAGAATGTCAAAGCCAAAATCCAAGACAAGGAGGGCATCCCGCCTGACCAG 2323529
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
|||||||| || || || ||||||||| ||||||| ||| || || |||||
Sbjct 2323528 CAGCGTCTGATTTTTGCGGGCAAACAGCTGGAAGATGGCCGTACTCTGTCAGACTATAAT 2323469
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419
|| || ||||| || || || || |||| ||| | || |||| ||
Sbjct 2323468 ATCCAGAAAGAGTCCACCCTGCACTTGGTGCTTCGCCTCCGGGGTGG 2323422
>seq85
Length=4131313
Score = 113 bits (124), Expect = 4e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||| || || || ||||| ||||||||||| || |||||| |||| || || ||
Sbjct 1818410 ATGCAGATCTTTGTGAAGACCCTGACAGGCAAGACCATCACCCTCGAGGTCGAGCCCAGT 1818351
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
||| | | || | |||||| | ||| |||||||| ||| | ||||| ||||||
Sbjct 1818350 GACGCTATTGAGAATGTCAAAGCCAAAATCCAAGACAAGGAGGGCATCCCGCCTGACCAG 1818291
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
|||||||| || || || ||||||||| ||||||| ||| || || |||||
Sbjct 1818290 CAGCGTCTGATTTTTGCGGGCAAACAGCTGGAAGATGGCCGTACTCTGTCAGACTATAAT 1818231
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419
|| || ||||| || || || || |||| ||| | || |||| ||
Sbjct 1818230 ATCCAGAAAGAGTCCACCCTGCACTTGGTGCTTCGCCTCTGGGGTGG 1818184
>seq33
Length=6086033
Score = 105 bits (116), Expect = 6e-18
Identities = 161/222 (73%), Gaps = 8/222 (4%)
Strand=Plus/Minus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||| |||||||| || || || || || || || ||||| |||| |||||||| ||
Sbjct 2214995 ATGCAGATTTTCGTGAAAACCCTTACGGGGAAGACCATCACTCTCGAGGTTGAACCCTCG 2214936
Query 31253 G--ACAGTGTCGAAACGGTCAAA-CAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGAC 31309
| ||| || |||| || || || ||| | ||| |||||||| | || || ||
Sbjct 2214935 GGTACAATG--GAAAATGTAAAGGCAAAGATTCA-GGATAAGGAAGGAATTCCTCCTGAT 2214879
Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATG-ACTATGAGCGATTA 31368
|||||| | || ||||| |||||||| || ||||||| | | | ||| || || ||
Sbjct 2214878 CAGCAGAGACTGATATTTGCTGGCAAGCAACTGGAAGA-TGGACGCACTTTGTCTGACTA 2214820
Query 31369 TAACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACT 31410
||||||||||| || || ||||||||||| || | |||||
Sbjct 2214819 CAACATTCAAAAGGAGTCCACTCTTCATCTTGTGTTGAGACT 2214778
>seq29
Length=5782310
Score = 96.9 bits (106), Expect = 3e-15
Identities = 154/221 (70%), Gaps = 0/221 (0%)
Strand=Plus/Plus
Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249
|| ||||| |||||||| || || || ||||| || || ||||| |||| |||||| |
Sbjct 156408 AAGATGCAGATTTTCGTGAAAACCCTTACAGGGAAGACCATCACTCTCGAGGTTGAAACC 156467
Query 31250 TCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGAC 31309
|| || | | |||| || || | || | | |||||||| | || || ||
Sbjct 156468 TCGGATACAATAGAAAATGTAAAGGCCAAGATTCAGAATAAGGAAGGAATTCCTCCTGAT 156527
Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTAT 31369
|||||| | || || || |||||||| || |||||||| || || || ||
Sbjct 156528 CAGCAGAGACTGATCTTTGCTGGCAAGCAATTGGAAGATGGACACACATTGTCTGACTAC 156587
Query 31370 AACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACT 31410
||||||||||| ||||| ||||||||||| || | |||||
Sbjct 156588 AACATTCAAAAGGAATCCACTCTTCATCTTGTGTTGAGACT 156628
>seq530
Length=2118653
Score = 95.1 bits (104), Expect = 1e-14
Identities = 154/219 (70%), Gaps = 2/219 (1%)
Strand=Plus/Minus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||| |||||||| || || || || || || || ||||| |||| |||||||| ||
Sbjct 64012 ATGCAGATTTTCGTGAAAACCCTTACGGGGAAGACCATCACTCTCGAGGTTGAACCCTCG 63953
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|| | | |||| || || | || ||| |||||||| | | || || |||
Sbjct 63952 GATACAATAGAAAATGTAAAGGCCAAGATTCAGGATAAGGAAGGAATTTCTCCTGATCAG 63893
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATG-ACTATGAGCGATTATAA 31371
||| | || || || |||||||| || ||||||| | | | ||| || || || ||
Sbjct 63892 CAGAGACTGATCTTTGCTGGCAAGCAACTGGAAGA-TGGACGCACTTTGTCTGACTACAA 63834
Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACT 31410
||||||||| || || ||||||||||| || | |||||
Sbjct 63833 CATTCAAAAGGAGTCCACTCTTCATCTTGTGTTGAGACT 63795
>seq174
Length=4297676
Score = 93.3 bits (102), Expect = 4e-14
Identities = 153/221 (69%), Gaps = 0/221 (0%)
Strand=Plus/Plus
Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249
|| ||||| ||||| || || || || | || || || ||||| |||| ||||| |
Sbjct 3533295 AAGATGCAGATTTTTGTGAAAACCCTTATGGGGAAGACCATCACTCTCGAGATTGAATCC 3533354
Query 31250 TCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGAC 31309
|| || | || |||| || || | || ||| |||||||| | || || ||
Sbjct 3533355 TCAGATACAGTAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGAT 3533414
Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTAT 31369
|||||| | || || ||||||||||| || |||||||| ||| || | || ||
Sbjct 3533415 CAGCAGAGACTGATCTTCGCTGGCAAGCAACTGGAAGACAGACAAACTTTGTGTGACTAC 3533474
Query 31370 AACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACT 31410
| ||||||||| || || ||||||||||| || | |||||
Sbjct 3533475 AGCATTCAAAAGGAGTCCACTCTTCATCTTGTGTTGAGACT 3533515
>seq59
Length=2579055
Score = 91.5 bits (100), Expect = 1e-13
Identities = 153/219 (70%), Gaps = 2/219 (1%)
Strand=Plus/Minus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||| |||||||| || || || || || || || ||||| ||| ||||||| ||
Sbjct 1130678 ATGCAGATTTTCGTGAAAACCCTTACGGGGAAGACCATCACTCTCGCGGTTGAACGCTCG 1130619
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|| | | |||| || || | || ||| |||||||| | || || || |||
Sbjct 1130618 GATACAATAGAAAATGTAAAGGCCAAGATTCAGGATAAGGAAGGAATTCCTCCTGATCAG 1130559
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATG-ACTATGAGCGATTATAA 31371
||| | || || || |||||||| || ||||||| | | | ||| || || || ||
Sbjct 1130558 CAGAGACTGATCTTTGCTGGCAAGCAACTGGAAGA-TGGACGCACTTTGTCTGACTACAA 1130500
Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACT 31410
||||||||| || || ||||||||||| || | |||||
Sbjct 1130499 CATTCAAAAGGAGTCCACTCTTCATCTTGTGTTGAGACT 1130461
>seq1198
Length=804178
Score = 87.8 bits (96), Expect = 2e-12
Identities = 160/233 (69%), Gaps = 1/233 (0%)
Strand=Plus/Plus
Query 31187 TCAAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAA 31246
||||| ||||| || ||||| ||||| ||||| ||||| || |||| | | || || ||
Sbjct 573480 TCAAA-ATGCAGATCTTCGTGAAGACCCTGACCGGCAAGACCATCAACCTAGAGGTAGAG 573538
Query 31247 CCGTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCC 31306
|| |||| |||||| || || | || || || | ||| | || ||
Sbjct 573539 CCCAGTGACACCATCGAAAATGTGAAGGCCAAGATCCAAGATAAACAGGGCATCCCCCCT 573598
Query 31307 GACCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGAT 31366
||||||||| | || || || || ||||| ||| ||||||| ||| | |||
Sbjct 573599 GACCAGCAGAGGCTCATTTTTGCAGGCAAGCAGCTGGAAGATGGCCACACTCTTTCTGAT 573658
Query 31367 TATAACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419
|||||||| || ||||| ||||| || || ||||| || | |||||||| ||
Sbjct 573659 TATAACATCCAGAAAGAGTCGACCCTGCACCTGGTTCTGCGCCTGAGGGGTGG 573711
>seq2164
Length=79412
Score = 86.0 bits (94), Expect = 6e-12
Identities = 156/226 (69%), Gaps = 2/226 (1%)
Strand=Plus/Plus
Query 31195 GCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGA 31254
||| || || || ||||| ||||| ||||| || |||||| || | || || || ||
Sbjct 51901 GCAGATCTTTGTGAAGACCCTGACGGGCAAGACCATCACCCTCAAGGTCGAGCCCAGTGA 51960
Query 31255 CAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCA 31314
|| | || | |||||| | ||| |||||||| || | ||||| ||||||||
Sbjct 51961 CACTACTGAGAATGTCAAAGCCAAAATCCAAGACAAGGAGGGTATCCCGCCTGACCAGCA 52020
Query 31315 GCGTCTAATATTCGCTGGCAAACAGTTGGAAGA-CTCTATGACTATGAGCGATTATAACA 31373
|||||| || || | ||||||||| ||||| | | || ||| || || |||| |
Sbjct 52021 GCGTCTGATTTTTGTGGGCAAACAGCTGGAAAATGGCCAT-ACTCTGTCAGACGATAATA 52079
Query 31374 TTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419
| || ||||| || || || || |||| ||| | || |||| ||
Sbjct 52080 TCCAGAAAGACTCCACCCTGCACTTGGTGCTTCGCCTCTGGGGTGG 52125
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445744707892560
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