Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Odobenus_20rosmarus_20divergens_20[refseq_20GCF_5F000321225.1_202013
-01-16] 3,893 sequences; 2,400,150,193 total letters
Query= NC_003225.3
Length=309286
Score E
Sequences producing significant alignments: (Bits) Value
seq417 105 1e-17
seq148 87.8 4e-12
>seq417
Length=2207251
Score = 105 bits (116), Expect = 1e-17
Identities = 294/448 (66%), Gaps = 5/448 (1%)
Strand=Plus/Minus
Query 101908 GGAACTAATTGTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATC 101967
||||| |||| | ||||||||| || ||||||||||||||| |||| | || | ||
Sbjct 864123 GGAACGGGTTGTGGACTTTGCTGCTGTGGAAGGAATCTTCTTTTCTGGTTCTTTTGAGTC 864064
Query 101968 CATTTTCTGGATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCAT 102027
|| |||||| ||||||| | | | ||||||| ||||| | |||||||| | ||
Sbjct 864063 GATATTCTGGCTCAAGAAACGCAGCCTGATGCCTGGCCTCACGTTTTCCAATGAACTTAT 864004
Query 102028 TTCTAGGGACGAAGGTCTTCATCGCGACTTTGCATGCATGCTGTTGAAAAAGGGTTTTGT 102087
| || || || ||| | || | |||||||| ||| || |||| ||| | | ||
Sbjct 864003 TAGCAGAGATGAGGGTTTACACTGTGACTTTGCCTGCCTGATGTTCAAACA---CCTGGT 863947
Query 102088 TGATACCCCATCAAGAGAAAGGA-TTCTTGAAATTGTCACTGAAGCCGTCCGAATTGAAC 102146
| | || || ||| | ||| | ||||| | | | | ||||| | || || |
Sbjct 863946 CCACAAACCTTC-CGAGCAGGGAGTGAAGGAAATAATTATTAATGCCGTTCAGATAGAGC 863888
Query 102147 AAGAATTTCTCACAGTTTCCCTGCCTGTTAAATTAGTGGGAATGAACTGCAAGTTGATGA 102206
| | ||| ||| | || |||| | || || | || ||||| |||| ||| ||||
Sbjct 863887 AGGGATTCATCAAGGAGGCCTTGCCCATGAAGTTCATTGGGATGAATTGCATGTTAATGA 863828
Query 102207 GCCAGTACATTGAATTTGTGGCAGATAAACTATTGGTTGAAATGGGACTAGAAAAGCACT 102266
||||| ||||| || |||||||| ||| || | || | || | | ||| |
Sbjct 863827 AGCAGTATATTGAGTTCGTGGCAGACCGACTTATGCTGGAGCTAGGTTTTGGCAAGGTTT 863768
Query 102267 ATAATGTTACCAACCCCTTCCCATTCATGGACAATATTTCCCTCGAGAATAAGACCAACT 102326
|| || || || | ||||| |||||||| || || ||||| ||||
Sbjct 863767 TCGGAGTAGAAAATCCATTTGACTATATGGAGAATATTTCACTGGAAGGGAAGACTAACT 863708
Query 102327 TTTTTGAAAAGAGAGTCGCCGAGTATCA 102354
| |||| |||||||| | |||||||||
Sbjct 863707 TCTTTGTGAAGAGAGTAGGCGAGTATCA 863680
>seq148
Length=4816872
Score = 87.8 bits (96), Expect = 4e-12
Identities = 83/106 (78%), Gaps = 0/106 (0%)
Strand=Plus/Minus
Query 101916 TTGTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCT 101975
|||| || |||||||| || ||||||||||||||| |||| | || || || || ||||
Sbjct 2362274 TTGTGGCTTTTGCTGCTGTGGAAGGAATCTTCTTTTCTGGTTCTTTTGCGTCGATATTCT 2362215
Query 101976 GGATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGA 102021
|| ||||||| | || | ||||||| ||||||| ||||||||
Sbjct 2362214 GGCTCAAGAAACGCGGCCTGATGCCTGGCCTCACCTTTTCCAATGA 2362169
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 989534640477815
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |