Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Odobenus_20rosmarus_20divergens_20[refseq_20GCF_5F000321225.1_202013
-01-16] 3,893 sequences; 2,400,150,193 total letters
Query= NC_003310.1
Length=196858
Score E
Sequences producing significant alignments: (Bits) Value
seq1020 369 5e-97
seq417 244 1e-59
seq3 125 9e-24
seq158 111 2e-19
seq148 111 2e-19
seq1031 102 1e-16
>seq1020
Length=850931
Score = 369 bits (408), Expect = 5e-97
Identities = 647/939 (69%), Gaps = 10/939 (1%)
Strand=Plus/Minus
Query 33231 TTTCT-TTAAAAGTCAACATCTAAAGAAAAATGATTGTCTTCTTGA---GACATAACTCC 33286
||||| ||| |||||| |||| || | |||| ||| ||| | || ||||| | |||
Sbjct 339111 TTTCTCTTAGAAGTCAGCATCCAAGGTAAAAGAATTCTCTGTTGGACTTGACATCATTCC 339052
Query 33287 CATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATAT 33346
||| | || ||||| || || | || || ||| ||||| || ||||||| ||| ||
Sbjct 339051 CATCCTCTGATATTCGCCTACTCTCTTCTC---AAAGTTAGTCTTCCCTTCCAGTGAAAT 338995
Query 33347 ATTTTCCATGAAATCAAACGGATTGGTAACATTGTAAAtttttttAAATCCCAATTCAGA 33406
||| ||||| || ||||| ||||| || || ||| || ||| || | ||
Sbjct 338994 ATTCTCCATAAAGTCAAATGGATTTTCTACTCTGAAAACCTTGCCAAAACCTAGCTCCAG 338935
Query 33407 AATCAATCTATCTGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTAT 33466
|| | || ||||| ||||| || ||||| ||||| | | |||||||| || ||
Sbjct 338934 CATAAGTCGGTCTGCCACGAACTCAATATACTGCTTCATTAATGTGCAATTCATCCCAAT 338875
Query 33467 GAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATGGATACCGCATTTGTTAT 33526
||| || || || | ||| | || || || || || || || || ||||| | ||
Sbjct 338874 GAGCTTCACAGGCAAGGCCTCCGTGAGGAACTCCTGCTCTATCCGAACGGCATTAATAAT 338815
Query 33527 AATAAATCTAACGGTTTCTTCACTCGGTGGATGTAATAAATGTTTAAACATCAAACATGC 33586
|| | || | | || ||| || | | ||||| ||||||| || ||
Sbjct 338814 TATTTCCTTCACTCTCTGCTCGGAAGGTTTGTGGACCAGGTGTTTGAACATCAGGCAGGC 338755
Query 33587 GAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGTCCGGG 33646
|| || ||||| | |||||| ||||| ||| | | ||| || ||||| | ||| || ||
Sbjct 338754 AAAGTCACAGTGTAAACCCTCATCTCTGCTAGTAAGTTCATTGGAAAAGGCGAGGCCAGG 338695
Query 33647 CATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAGATTCC 33706
||| |||||||| || || ||||| ||||| || || || || || ||||||| ||||||
Sbjct 338694 CATCAGGCCACGTTTCTTGAGCCAGAATATCGATGCAAAAGAACCAGAAAAGAGGATTCC 338635
Query 33707 TTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCGCTGTCATGTATCCA 33763
||| || |||||||| || | || | || || || ||| | |||| ||||
Sbjct 338634 TTCCACAGCAGCAAAAGCCACAACCCGTTCCCCGTAGGTACCCTCTTTGTCCCCAGTCCA 338575
Query 33764 CTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAG 33823
| |||||||| |||||||| |||||||||||||| || || ||||| || |||||
Sbjct 338574 ATGCAAGGCCCAATCTGCCTTCTTCTTTACACAAGGCATTGTCTCGATGGCGTTGAAGAG 338515
Query 33824 ATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGA 33883
| | | |||| || |||||||| |||||| || | | ||||| ||||| || ||
Sbjct 338514 AAATTCCCTTTCTTTGGAATCTTTAATATAAGTGTCAGTGAGGAGACTGTACATCTCAGA 338455
Query 33884 ATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCAC 33943
||| |||||||| ||||| | || || | |||||||| | || || |||||||| ||
Sbjct 338454 ATGGATGTTTTCCATGGCAAATTGGAAGTCATAGAAACAGCGGGCTTCTGTAATCTGAAC 338395
Query 33944 TTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCATCACTGGCTGCAAAAAA 34003
|||| | ||| || || | || |||||||| || || |||||||| |||||||| ||
Sbjct 338394 TTCTTGGCTAAACCGCTCCACCAAGTTTTCATTTACGATGCCATCACTCGCTGCAAAGAA 338335
Query 34004 CGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTATTCCAATCATTGAT 34063
|||| || || |||||| ||| | || || || | || | ||| | | ||
Sbjct 338334 AGCCAGAACGTGGGATATAAAGTATCTCTCCTCAGGCTTCAGGGATTCCCAGTGCTGAAT 338275
Query 34064 ATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACAT 34123
|| || || | |||||| | ||| |||||||||| || ||||| || || |||||| |
Sbjct 338274 GTCCTTGGAAAGATCCACCTTTTCAGCTGTCCAAAAGGAAGCCTCAGCTTTCTTATACCT 338215
Query 34124 ATTCCAGATGTCATGATATTGGATTGGGAAAATAACAAA 34162
| ||| || ||| || | ||| ||||| || |||||
Sbjct 338214 CTGCCAAATATCACAGTACTCGATGGGGAAGATGACAAA 338176
>seq417
Length=2207251
Score = 244 bits (270), Expect = 1e-59
Identities = 497/736 (68%), Gaps = 29/736 (4%)
Strand=Plus/Plus
Query 33230 GTTTCT-TTAAAAGTCAACATCTAAAGAAAAATGATTGTCTTCTTGA---GACATAACTC 33285
|||||| ||| |||||| |||| || | |||| ||| ||| | || ||||| | ||
Sbjct 863612 GTTTCTCTTAGAAGTCAGCATCCAAGGTAAAAGAATTCTCTGTTGGACTTGACATCATTC 863671
Query 33286 CCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATA 33345
|||| | || || || || || | || | || || ||||| || ||||||| ||| |
Sbjct 863672 CCATCCTCTGATACTCGCCTACTCTCTTCACAAAGAAGTTAGTCTTCCCTTCCAGTGAAA 863731
Query 33346 TATTTTCCATGAAATCAAACGGATTGGTAACATTGTAAAtttttttAAATCCCAATTCAG 33405
|||| ||||| | ||||| ||||| || | ||| || ||| || | ||
Sbjct 863732 TATTCTCCATATAGTCAAATGGATTTTCTACTCCGAAAACCTTGCCAAAACCTAGCTCCA 863791
Query 33406 AAATCAATCTATCTGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTA 33465
|| | || ||||| ||||| || ||||| ||||| | |||||||| || |
Sbjct 863792 GCATAAGTCGGTCTGCCACGAACTCAATATACTGCTTCATTAACATGCAATTCATCCCAA 863851
Query 33466 TGAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATGGATACCGCATTTGTTA 33525
||| || | || | ||| | | | ||| | || || || || |||||
Sbjct 863852 TGAACTTCATGGGCAAGGCCTCCTTGATGAATCCCTGCTCTATCTGAACGGCATT----- 863906
Query 33526 TAATAAATCTAACGGTTTCTTCACTCGGTG----GA-------TGTAATAAATGTTTAAA 33574
||||| | | || |||||||| || || || | | ||||| ||
Sbjct 863907 -AATAATTAT-----TTCCTTCACTCCCTGCTCGGAAGGTTTGTGGACCAGGTGTTTGAA 863960
Query 33575 CATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAA 33634
||||| || || || || ||||| | |||||| ||||| ||||| | ||| || |||||
Sbjct 863961 CATCAGGCAGGCAAAGTCACAGTGTAAACCCTCATCTCTGCTAATAAGTTCATTGGAAAA 864020
Query 33635 CGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGA 33694
|||||| || ||||| |||| || || || ||||| ||||| || | || || || ||
Sbjct 864021 CGTGAGGCCAGGCATCAGGCTGCGTTTCTTGAGCCAGAATATCGACTCAAAAGAACCAGA 864080
Query 33695 AAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCGCT 33751
||||||||||||||| || ||||||||| | | || | || || || | | | |
Sbjct 864081 AAAGAAGATTCCTTCCACAGCAGCAAAGTCCACAACCCGTTCCCCGTAGGTAGCCTCTTT 864140
Query 33752 GTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTAT 33811
||| ||||| ||||| | |||| ||| |||||||||||||| || || ||
Sbjct 864141 GTCCCCGATCCAACGCAAGGCCCAGGCTGCCTCCTTCTTTACACAAGGCATTGTCTCCAT 864200
Query 33812 GGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACT 33871
||| || |||||| | | |||| | |||||||| ||||| || || | |||||
Sbjct 864201 GGCGTTGAAGAGAAATTCCCTTTCTTCGGAATCTTTAATGTAAGTGTCAATGAGGAGACT 864260
Query 33872 ATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTC 33931
|||||| || |||||||||||||| |||| || || || || |||||||| | || ||
Sbjct 864261 ATACATCTCAGAATGAATGTTTTCCATGGTAATTTGGAAGCCATAGAAACAGCGGGCTTC 864320
Query 33932 GGTAATCTGCACTTCT 33947
|||||||| ||||||
Sbjct 864321 TGTAATCTGAACTTCT 864336
Score = 95.1 bits (104), Expect = 2e-14
Identities = 139/194 (72%), Gaps = 2/194 (1%)
Strand=Plus/Plus
Query 33970 TTTCATTCACTATTCCATCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATT 34029
||||||| || || || |||| | ||||| || |||| ||||| |||||| |||
Sbjct 864553 TTTCATTTACCATGCCGGCACTCGGCGCAAAGAAAGCCAGAACATGGGATATAAAGTATC 864612
Query 34030 TTTCGTCTGGTGTTAGTTTATTCCAATCATTGA-TATCTTTAGATATATCCACTTCTTCC 34088
| || || || | || ||||| ||| | || || || | ||||||||||||
Sbjct 864613 TCTCCTCAGGCTTCAGGG-ATTCCCGCGGCTGAATGTCCTTGGAAAGATCCACTTCTTCA 864671
Query 34089 ACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGGATT 34148
|||||||||| || ||||| || || |||||||| | ||| || ||||| || | |||
Sbjct 864672 GCTGTCCAAAAGGAAGCCTCAGCTTTCTTATACATCTGCCAAATATCATGGTACTCGATA 864731
Query 34149 GGGAAAATAACAAA 34162
||||| || |||||
Sbjct 864732 GGGAAGATGACAAA 864745
>seq3
Length=9835568
Score = 125 bits (138), Expect = 9e-24
Identities = 110/137 (80%), Gaps = 0/137 (0%)
Strand=Plus/Plus
Query 62388 ACTTGGAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACC 62447
|| || |||||||| ||||| ||||| ||||| || || || |||||||| ||||| |
Sbjct 152606 ACCTGAAATTCTCCTGACAAGACTCTGCGAGTATAGATGTTGCTGGTATAAGGTTCAATG 152665
Query 62448 GACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAA 62507
|||||||||||||||| ||| ||||||||||| ||||| ||||| || || | | ||||
Sbjct 152666 GACTCATTATTTCCCAGAATCTGAGCAGTTGAAGCAGTAGGCATCGGGGCAATAAGTAAA 152725
Query 62508 CTATTTCTAAGACCGTA 62524
|| ||||| | ||| ||
Sbjct 152726 CTGTTTCTTATACCATA 152742
Score = 114 bits (126), Expect = 2e-20
Identities = 128/171 (75%), Gaps = 0/171 (0%)
Strand=Plus/Plus
Query 62113 TCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATAT 62172
|||| ||||| ||||||||||| || |||||| ||| | || || || || ||||| |
Sbjct 150104 TCCAGCCGTAGAAATGCATACTGGTGAGTTTGCCATAGTTAGGCTCAGCGATGTGGATGT 150163
Query 62173 TCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCT 62232
||| |||||| |||||||| ||||| || || || || || ||||| || | | || |
Sbjct 150164 TCAAAGATTGGCTTTGATCAATGAAAGCACCTCTTTCAGCTGCCATCTTAAGAACGGTTT 150223
Query 62233 TTTGTGCAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAA 62283
| |||| ||||||||| | || ||||||| | |||| | || || ||||
Sbjct 150224 TCTGTGAAATTTCCCACACGGTCTTATAAAGTTGCTTCAGGTCATCAGGAA 150274
Score = 109 bits (120), Expect = 7e-19
Identities = 138/190 (73%), Gaps = 0/190 (0%)
Strand=Plus/Plus
Query 62626 CATATGTATCATATGGTCCTTCCTTCTCAGCTAGTTTACAACTCGCCTCTAATGCACCGT 62685
|||| || |||||||| || | || || || || | ||| || || || || || || |
Sbjct 157356 CATAGGTTTCATATGGGCCATGCTCCTTGGCCAGGTCACAGCTGGCTTCCAAGGCTCCAT 157415
Query 62686 AATAAATGGTTTCAAAGATCTTCTTATTTAGATCTTGTGCTTCCGGGCTATCAAATGGAT 62745
||||||||||||||||||||| |||||| || || ||||| || || ||||| ||||
Sbjct 157416 AATAAATGGTTTCAAAGATCTGCTTATTCAGTAGCTGGGCTTCTGGACTCTCAAAAGGAT 157475
Query 62746 AATTTAAGAGAATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTATGTC 62805
| | | |||||||| || || || | ||||| || || || || || || | ||| |
Sbjct 157476 ACCTCATCAGAATAAAAGCATCTGCCAGACCTTGTACCCCGATTCCAATGGGGCGATGGC 157535
Query 62806 TCTTATTAGA 62815
||||| ||
Sbjct 157536 GTTTATTTGA 157545
Score = 96.9 bits (106), Expect = 4e-15
Identities = 104/138 (75%), Gaps = 0/138 (0%)
Strand=Plus/Plus
Query 63263 CTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTTGTTCT 63322
|| |||||||||||| |||||||| ||||||||||| || | || || || || | |
Sbjct 162117 CTCCACTCGTTTCATGAAGAGATCTGGAATCCAAAGGGCAAAGAAAAGGTCCCTGGCACG 162176
Query 63323 ATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCA 63382
||||| || |||||||| ||||| || | ||| || ||| | | ||| || |||||||
Sbjct 162177 CTGTTCTTCCTTTCCTGTGTTCTTCTTTAAATCCAGAAACTCAAAAATGTCTAAATGCCA 162236
Query 63383 CGGTTCCAAGTATATGGC 63400
|| |||| ||| || ||
Sbjct 162237 AGGCTCCAGGTAAATAGC 162254
>seq158
Length=7371824
Score = 111 bits (122), Expect = 2e-19
Identities = 105/134 (78%), Gaps = 0/134 (0%)
Strand=Plus/Minus
Query 33606 TCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTA 33665
|| ||||| || || | ||| || |||||||||||||||||||| || || | || ||
Sbjct 3463986 TCATCTCTGCTGATGAGTTCATTGGAAAACGTGAGTCCGGGCATGAGACCTCTTTTCTTT 3463927
Query 33666 AGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAGATTCCTTCTACTGCAGCAAAGGCA 33725
||||| ||||| | ||| || ||||| || ||||| ||||||||||| |||||||| ||
Sbjct 3463926 AGCCAGAATATAGCAGCAAAAGATCCCGAGAAGAAAATTCCTTCTACAGCAGCAAAAGCC 3463867
Query 33726 ATAAGTCTCTCTCC 33739
| || ||| || ||
Sbjct 3463866 ACAACTCTTTCCCC 3463853
Score = 84.2 bits (92), Expect = 3e-11
Identities = 70/86 (81%), Gaps = 0/86 (0%)
Strand=Plus/Minus
Query 34079 CACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATG 34138
||| || || ||||||| || ||||||| ||||| ||||||||| ||||| || ||| |
Sbjct 3453372 CACCTCCTCAGCTGTCCAGAAGGATGCCTGTGCCTGTTTATACATTTTCCAAATATCAGG 3453313
Query 34139 ATATTGGATTGGGAAAATAACAAATC 34164
||||||||||| || || |||||||
Sbjct 3453312 GTATTGGATTGGAAAGATGACAAATC 3453287
Score = 84.2 bits (92), Expect = 3e-11
Identities = 84/109 (77%), Gaps = 0/109 (0%)
Strand=Plus/Minus
Query 33966 AAATTTTCATTCACTATTCCATCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAA 34025
|||||||||||||| ||||||||||||||||||||||| || |||| || ||||||
Sbjct 3458694 AAATTTTCATTCACAATTCCATCACTGGCTGCAAAAAAGGCTAATATGTGAGAGATAAAA 3458635
Query 34026 TATTTTTCGTCTGGTGTTAGTTTATTCCAATCATTGATATCTTTAGATA 34074
|| || || || | | | || || ||||| | | || ||| || ||||
Sbjct 3458634 TACTTCTCATCCGATTTAAGCTTGTTCCAGTGAGGGAGATCCTTTGATA 3458586
>seq148
Length=4816872
Score = 111 bits (122), Expect = 2e-19
Identities = 97/121 (80%), Gaps = 0/121 (0%)
Strand=Plus/Plus
Query 33604 CCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 33663
|||| ||||| ||||| | ||| || ||||| ||||| || ||||| ||||| || || |
Sbjct 2362149 CCTCATCTCTGCTAATAAGTTCATTGGAAAAGGTGAGGCCAGGCATCAGGCCGCGTTTCT 2362208
Query 33664 TAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAGATTCCTTCTACTGCAGCAAAGG 33723
| ||||| ||||| || || || || || ||||||||||||||||| || |||||||| |
Sbjct 2362209 TGAGCCAGAATATCGACGCAAAAGAACCAGAAAAGAAGATTCCTTCCACAGCAGCAAAAG 2362268
Query 33724 C 33724
|
Sbjct 2362269 C 2362269
>seq1031
Length=1524375
Score = 102 bits (112), Expect = 1e-16
Identities = 94/119 (79%), Gaps = 0/119 (0%)
Strand=Plus/Plus
Query 188489 GTTACTTTCTATGATGCGCGTATCGTTATACAAGCTTTCATGTTGACTACTGCAGTGTTT 188548
|||||||||||||| | | ||| || | ||||| || || |||||||||| || |||
Sbjct 517172 GTTACTTTCTATGACGTGTATATTATTCTCCAAGCATTTATACTGACTACTGCTGTATTT 517231
Query 188549 CTTGCTCTGACTACATGTACTCTACAATCAAAGAGAGATTTCAGTAAACTTGTAACAGG 188607
|||| | ||||| || ||||||||| || |||||||||||||| ||| ||| | ||||
Sbjct 517232 CTTGGTTTGACTGTATATACTCTACAGTCTAAGAGAGATTTCAGCAAATTTGGAGCAGG 517290
Score = 91.5 bits (100), Expect = 2e-13
Identities = 62/70 (89%), Gaps = 0/70 (0%)
Strand=Plus/Plus
Query 188172 TGCTCCTCCATCGAGGACGACTTCAACTATGACAGCTCGGTGGCGTCTGCCAGCGTGCAC 188231
|||||||||||||||||||| |||||||||| ||||| ||||| || ||||| ||||||
Sbjct 497674 TGCTCCTCCATCGAGGACGATTTCAACTATGGCAGCTGCGTGGCCTCCGCCAGTGTGCAC 497733
Query 188232 ATACGAATGG 188241
|| |||||||
Sbjct 497734 ATCCGAATGG 497743
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 629786951501040
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