Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Odobenus_20rosmarus_20divergens_20[refseq_20GCF_5F000321225.1_202013
-01-16] 3,893 sequences; 2,400,150,193 total letters
Query= NC_003529.1
Length=155060
Score E
Sequences producing significant alignments: (Bits) Value
seq949 96.9 3e-15
seq47 96.9 3e-15
seq33 95.1 1e-14
seq1114 93.3 4e-14
seq1198 91.5 1e-13
seq530 89.7 5e-13
seq59 86.0 6e-12
>seq949
Length=596474
Score = 96.9 bits (106), Expect = 3e-15
Identities = 151/216 (70%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 139549 ACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGA 139608
||| | ||| | ||| | || |||||||| || ||||| ||||| | ||||
Sbjct 262165 ACGGAGAACCAGGTGGAGAGTTGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCC 262224
Query 139609 GTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTT 139668
||||| ||||| || |||||| |||| || | ||||| || || || ||||| |||||
Sbjct 262225 ATCTTCCAGCTGCTTGCCAGCAAAGATAAGCCTCTGCTGGTCAGGGGGGATGCCCTCTTT 262284
Query 139669 GTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCAC 139728
|| ||| || || | | ||| | ||||| ||||||||||||| | ||| |
Sbjct 262285 ATCTTGGATCTTGGCCTTCACATTTTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGAT 262344
Query 139729 CGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764
||||||||||||| || || || || || |||||
Sbjct 262345 GGTCTTGCCGGTCAGGGTCTTCACAAAGATCTGCAT 262380
>seq47
Length=4803410
Score = 96.9 bits (106), Expect = 3e-15
Identities = 152/218 (70%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 139547 AAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTC 139606
|| |||| || | ||| | || ||||| || || ||||| || || || |||| |
Sbjct 4289418 AAGCGCAGGACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGC 4289477
Query 139607 GAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCT 139666
||| || |||||||| || ||| |||||| | ||||| || || || ||||| ||
Sbjct 4289478 CCGTCCTCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGGATGCCCTCC 4289537
Query 139667 TTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTC 139726
||||| ||| || || | | || | ||||| ||||||||||||| | ||
Sbjct 4289538 TTGTCCTGGATCTTCGCCTTGACATTCTCGATGGTGTCACTGGGCTCCACCTCCAGAGTG 4289597
Query 139727 ACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764
| |||||||||||||| || || ||||| || |||||
Sbjct 4289598 ATGGTCTTGCCGGTCAAGGTCTTCACGAAGATCTGCAT 4289635
Score = 96.9 bits (106), Expect = 3e-15
Identities = 158/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 139537 GCCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCT 139596
||| |||| | |||| || | ||| | || ||||| || || ||||| || ||
Sbjct 4289636 GCCCCCTCTGAGGCGCAGGACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAGA 4289695
Query 139597 CATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 139656
|| |||| | ||| || ||||| || || ||| |||||| | ||||| || || ||
Sbjct 4289696 CAGGGTGCGCCCGTCCTCCAGCTGCTTCCCGGCAAAGATCAACCTCTGCTGGTCAGGGGG 4289755
Query 139657 TATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716
||||| || ||||| ||| || || | | || | ||||| ||||||||||
Sbjct 4289756 GATGCCCTCCTTGTCCTGGATCTTCGCCTTGACATTCTCGATGGTGTCACTGGGCTCCAC 4289815
Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764
||| | ||| | |||||||||||||| || || ||||| || |||||
Sbjct 4289816 CTCCAGGGTGATGGTCTTGCCGGTCAAGGTCTTCACGAAGATCTGCAT 4289863
Score = 91.5 bits (100), Expect = 1e-13
Identities = 149/215 (69%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 139550 CGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAG 139609
|||| || | ||| | || ||||| || || ||||| || || || |||| | |
Sbjct 4289877 CGCAGGACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCG 4289936
Query 139610 TCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTG 139669
|| || ||||| || || ||| |||||| | ||||| || || || ||||| ||||||
Sbjct 4289937 TCCTCCAGCTGCTTCCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGGATGCCCTCTTTG 4289996
Query 139670 TCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACC 139729
|| ||| || || | | || | ||||| ||||||||||||| | ||| |
Sbjct 4289997 TCCTGGATCTTCGCCTTGACATTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATG 4290056
Query 139730 GTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764
||||| |||||||| || || || || || |||||
Sbjct 4290057 GTCTTACCGGTCAAGGTCTTCACAAAGATCTGCAT 4290091
>seq33
Length=6086033
Score = 95.1 bits (104), Expect = 1e-14
Identities = 147/205 (72%), Gaps = 4/205 (2%)
Strand=Plus/Plus
Query 139562 TGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGC-TCGAGTCTTCGAGCTG 139620
|||| || ||||| ||||||||||| || || || |||| || | ||||| || ||
Sbjct 2214793 TGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTGCGTCCA-TCTTCCAGTTG 2214851
Query 139621 TTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTT 139680
|| |||||| | ||||| | |||||||| ||||| || ||||| || || ||| | |
Sbjct 2214852 CTTGCCAGCAAATATCAGTCTCTGCTGATCAGGAGGAATTCCTTCCTTATC-CTGAATCT 2214910
Query 139681 TTG-TTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGG 139739
||| |||| | ||||| ||| | | ||| || ||||| | || | ||||| || |
Sbjct 2214911 TTGCCTTTACATTTTCCATTGTACCCGAGGGTTCAACCTCGAGAGTGATGGTCTTCCCCG 2214970
Query 139740 TCAACGTTTTTACGAATATTTGCAT 139764
| | ||||| ||||| || |||||
Sbjct 2214971 TAAGGGTTTTCACGAAAATCTGCAT 2214995
>seq1114
Length=1661397
Score = 93.3 bits (102), Expect = 4e-14
Identities = 150/216 (69%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 139549 ACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGA 139608
||| | ||| | ||| | || |||||||| || ||||| ||||| | ||||
Sbjct 1502913 ACGGAGAACCAGGTGGAGAGTTGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCC 1502972
Query 139609 GTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTT 139668
||||| ||||| || |||||| |||| || | ||||| || || || ||||| |||||
Sbjct 1502973 ATCTTCCAGCTGCTTGCCAGCAAAGATAAGTCTCTGCTGGTCAGGGGGGATGCCCTCTTT 1503032
Query 139669 GTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCAC 139728
|| ||| || || | | ||| || || ||||||||||||| | ||| |
Sbjct 1503033 ATCTTGGATCTTCGCCTTCACGTTTTCAGTGGTATCACTGGGCTCCACCTCCAGGGTGAT 1503092
Query 139729 CGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764
||||||||||||| || || ||||| || |||||
Sbjct 1503093 GGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 1503128
>seq1198
Length=804178
Score = 91.5 bits (100), Expect = 1e-13
Identities = 157/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 139537 GCCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCT 139596
||| |||| | ||| | ||| | ||| | || |||||||| || || || |||||
Sbjct 573940 GCCACCTCTCAGACGGAGAACCAGGTGGAGAGTTGACTCTTTCTGGATATTGTAATCAGA 573881
Query 139597 CATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 139656
| |||| ||||| ||||| || |||||| |||| || | ||||| || || ||
Sbjct 573880 AAGAGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATAAGCCTCTGCTGGTCAGGGGG 573821
Query 139657 TATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716
||||| ||||| || ||| || || | | ||| ||||| ||||||||||
Sbjct 573820 GATGCCCTCTTTATCTTGGATCTTCGCCTTCACGTTTTCAGTGGTGTCACTGGGCTCCAC 573761
Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764
||| | ||| | ||||||||||| | || || ||||| || |||||
Sbjct 573760 CTCCAGGGTGATGGTCTTGCCGGTTAGGGTCTTCACGAAGATCTGCAT 573713
Score = 82.4 bits (90), Expect = 8e-11
Identities = 147/215 (68%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 139550 CGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAG 139609
|||| ||| | ||| | || |||||||| || ||||||||||| | |||
Sbjct 573699 CGCAGAACCAGGTGCAGGGTCGACTCTTTCTGGATGTTATAATCAGAAAGAGTGTGGCCA 573640
Query 139610 TCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTG 139669
||||| ||||| || || ||| | || || | ||||| || || || ||||| | |||
Sbjct 573639 TCTTCCAGCTGCTTGCCTGCAAAAATGAGCCTCTGCTGGTCAGGGGGGATGCCCTGTTTA 573580
Query 139670 TCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACC 139729
|| ||| || || | | ||| | ||||| ||||||| ||||| | | | |
Sbjct 573579 TCTTGGATCTTGGCCTTCACATTTTCGATGGTGTCACTGGGCTCTACCTCTAGGTTGATG 573520
Query 139730 GTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764
||||||||||||| || || ||||| || |||||
Sbjct 573519 GTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 573485
>seq530
Length=2118653
Score = 89.7 bits (98), Expect = 5e-13
Identities = 146/205 (71%), Gaps = 4/205 (2%)
Strand=Plus/Plus
Query 139562 TGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGC-TCGAGTCTTCGAGCTG 139620
|||| || ||||| ||||||||||| || || || |||| || | ||||| || ||
Sbjct 63810 TGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTGCGTCCA-TCTTCCAGTTG 63868
Query 139621 TTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTT 139680
|| |||||| ||||||| | |||||||| |||| || ||||| || || ||| | |
Sbjct 63869 CTTGCCAGCAAAGATCAGTCTCTGCTGATCAGGAGAAATTCCTTCCTTATC-CTGAATCT 63927
Query 139681 TTG-TTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGG 139739
| | |||| | ||| | ||| || | ||| || ||||| | || | ||||| || |
Sbjct 63928 TGGCCTTTACATTTTCTATTGTATCCGAGGGTTCAACCTCGAGAGTGATGGTCTTCCCCG 63987
Query 139740 TCAACGTTTTTACGAATATTTGCAT 139764
| | ||||| ||||| || |||||
Sbjct 63988 TAAGGGTTTTCACGAAAATCTGCAT 64012
>seq59
Length=2579055
Score = 86.0 bits (94), Expect = 6e-12
Identities = 145/205 (71%), Gaps = 4/205 (2%)
Strand=Plus/Plus
Query 139562 TGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGC-TCGAGTCTTCGAGCTG 139620
|||| || ||||| ||||||||||| || || || |||| || | ||||| || ||
Sbjct 1130476 TGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTGCGTCCA-TCTTCCAGTTG 1130534
Query 139621 TTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTT 139680
|| |||||| ||||||| | |||||||| ||||| || ||||| || || ||| | |
Sbjct 1130535 CTTGCCAGCAAAGATCAGTCTCTGCTGATCAGGAGGAATTCCTTCCTTATC-CTGAATCT 1130593
Query 139681 TTG-TTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGG 139739
| | |||| | ||| | ||| || | | | || ||| | | || | ||||| || |
Sbjct 1130594 TGGCCTTTACATTTTCTATTGTATCCGAGCGTTCAACCGCGAGAGTGATGGTCTTCCCCG 1130653
Query 139740 TCAACGTTTTTACGAATATTTGCAT 139764
| | ||||| ||||| || |||||
Sbjct 1130654 TAAGGGTTTTCACGAAAATCTGCAT 1130678
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496039860285600
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