Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Odobenus_20rosmarus_20divergens_20[refseq_20GCF_5F000321225.1_202013
-01-16] 3,893 sequences; 2,400,150,193 total letters
Query= NC_004003.1
Length=149599
Score E
Sequences producing significant alignments: (Bits) Value
seq1020 251 7e-62
seq417 159 3e-34
seq1832 123 2e-23
seq148 102 8e-17
>seq1020
Length=850931
Score = 251 bits (278), Expect = 7e-62
Identities = 598/897 (67%), Gaps = 15/897 (2%)
Strand=Plus/Minus
Query 13312 TAAAAATCAACATCTAATGAAAAAACATTATCGTCTTTGT-TAGAAATAACGCCCATTTT 13370
|| || ||| |||| || | |||| ||| || | || | | || || | ||||| |
Sbjct 339104 TAGAAGTCAGCATCCAAGGTAAAAGAATTCTC-TGTTGGACTTGACATCATTCCCATCCT 339046
Query 13371 TTGATATTCACTAACTCTTTTTTCAAAAAAGTTAGTTTTACCTTCCAGTGATATATTTTC 13430
|||||||| | ||||| || ||||| |||||| || ||||||||||| ||||| ||
Sbjct 339045 CTGATATTCGCCTACTCTCTTCTCAAA---GTTAGTCTTCCCTTCCAGTGAAATATTCTC 338989
Query 13431 CATAAAATCGAATGGATTTGTTGACATAAACACTTTATCACAACCTAGTTCTAATAATAA 13490
|||||| || ||||||||| | | || || || || ||||||| || | | |
Sbjct 338988 CATAAAGTCAAATGGATTTTCTACTCTGAAAACCTTGCCAAAACCTAGCTCCAGCATAAG 338929
Query 13491 TCTATCAGCAATAAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTAGTTT 13550
|| || || | ||||||||||| || |||||| |||||||| || || || ||
Sbjct 338928 TCGGTCTGCCACGAACTCAATATACTGCTTCATTAATGTGCAATTCATCCCAATGAGCTT 338869
Query 13551 TACAGGAATTATATTAGTTAAAAATTCTTTTTCTATAGACACAGCCTCGTTTATAATAAT 13610
||||| | | || | || || | ||||| || || | | ||||| ||
Sbjct 338868 CACAGGCAAGGCCTCCGTGAGGAACTCCTGCTCTATCCGAACGGCAT---TAATAATTAT 338812
Query 13611 ---CTTAATAATGTCATTAGAAGGAGGATATTTTAGATGTTTAAAAATTAAACACGCAAA 13667
||| | | | | ||||| | || ||||| || || | || |||||
Sbjct 338811 TTCCTTCACTCTCTGCTCGGAAGGTTTGTGGACCAGGTGTTTGAACATCAGGCAGGCAAA 338752
Query 13668 ATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCAT 13727
||||| || | ||||||||||| ||| ||||||| || ||||| | | || |||||
Sbjct 338751 GTCACAGTGTAAACCCTCATCTCTGCTAGTAAGTTCATTGGAAAAGGCGAGGCCAGGCAT 338692
Query 13728 CAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTC 13787
|| || ||||| || | ||| ||||| | || || || || ||||||| ||||| ||
Sbjct 338691 CAGGCCACGTTTCTTGAGCCAGAATATCGATGCAAAAGAACCAGAAAAGAGGATTCCTTC 338632
Query 13788 AACTGCAGCAAACGCTATTAGTCGTTCTCCAAACGATGCTTTTTTGTTTGATATCCATTT 13847
|| |||||||| || | | ||||| || | | | | ||||| |||| |
Sbjct 338631 CACAGCAGCAAAAGCCACAACCCGTTCCCCGTAGGTACCCTCTTTGTCCCCAGTCCAATG 338572
Query 13848 TCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCGATTGCATTGAATAAATG 13907
||||| || | || || || | | || |||||| ||||| || ||||| | |
Sbjct 338571 CAAGGCCCAATCTGCCTTCTTCTTTACACAAGGCATTGTCTCGATGGCGTTGAAGAGAAA 338512
Query 13908 TTCCTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTG 13967
|||| | ||||| | | | ||| || || ||| | || | || ||||| ||||| ||
Sbjct 338511 TTCCCTTTCTTTGGAATCTTTAATATAAGTGTCAGTGAGGAGACTGTACATCTCAGAATG 338452
Query 13968 TATGTTTTCTATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTGACCATTGTACCTC 14027
|||||||| || || | || || |||| ||||| | ||||||| || || ||
Sbjct 338451 GATGTTTTCCATGGCAAATTGGAAGTCATAGAAACAGCGGGCTTCTGTAATCTGAACTTC 338392
Query 14028 CGAGTAAAATCTTTCTGCCAAGTTTTCATTAACAATACCATCACTAGCTGCAAAAAATGC 14087
| ||| | || ||||||||||||| || || |||||||| |||||||| || ||
Sbjct 338391 TTGGCTAAACCGCTCCACCAAGTTTTCATTTACGATGCCATCACTCGCTGCAAAGAAAGC 338332
Query 14088 CAATATGTTTTTAATAAAGTATTGCTCTTCATTGTTGAGTTTTTTCCAATCGGCTAAA-- 14145
|| | || ||||||||| ||| ||| || || || ||| | ||| ||
Sbjct 338331 CAGAACGTGGGATATAAAGTATCTCTCCTCAGGCTTCAGGGATTCCCAGT--GCTGAATG 338274
Query 14146 TCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCGACAGCTTTTTTATAC 14202
||||| |||||||| || | ||| |||||||||| ||| ||||||| ||||||
Sbjct 338273 TCCTTGGAAAGATCCACCTTTTCAGCTGTCCAAAAGGAAGCCTCAGCTTTCTTATAC 338217
>seq417
Length=2207251
Score = 159 bits (176), Expect = 3e-34
Identities = 462/707 (65%), Gaps = 8/707 (1%)
Strand=Plus/Plus
Query 13312 TAAAAATCAACATCTAATGAAAAAACATTATCGTCTTTGT-TAGAAATAACGCCCATTTT 13370
|| || ||| |||| || | |||| ||| || | || | | || || | ||||| |
Sbjct 863620 TAGAAGTCAGCATCCAAGGTAAAAGAATTCTC-TGTTGGACTTGACATCATTCCCATCCT 863678
Query 13371 TTGATATTCACTAACTCTTTTTTCAAAAAAGTTAGTTTTACCTTCCAGTGATATATTTTC 13430
||||| || | ||||| || |||| |||||||| || ||||||||||| ||||| ||
Sbjct 863679 CTGATACTCGCCTACTCTCTTCACAAAGAAGTTAGTCTTCCCTTCCAGTGAAATATTCTC 863738
Query 13431 CATAAAATCGAATGGATTTGTTGACATAAACACTTTATCACAACCTAGTTCTAATAATAA 13490
|||| | || ||||||||| | || || || || ||||||| || | | |
Sbjct 863739 CATATAGTCAAATGGATTTTCTACTCCGAAAACCTTGCCAAAACCTAGCTCCAGCATAAG 863798
Query 13491 TCTATCAGCAATAAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTAGTTT 13550
|| || || | ||||||||||| || |||||| |||||||| || || | ||
Sbjct 863799 TCGGTCTGCCACGAACTCAATATACTGCTTCATTAACATGCAATTCATCCCAATGAACTT 863858
Query 13551 TACAGGAATTATATTAGTTAAAAATTCTTTTTCTATAGACACAGCCTCGTTTATAATAAT 13610
| || | | | | ||| | | ||||| || || | | ||||| ||
Sbjct 863859 CATGGGCAAGGCCTCCTTGATGAATCCCTGCTCTATCTGAACGGCAT---TAATAATTAT 863915
Query 13611 ---CTTAATAATGTCATTAGAAGGAGGATATTTTAGATGTTTAAAAATTAAACACGCAAA 13667
||| | | | ||||| | || ||||| || || | || |||||
Sbjct 863916 TTCCTTCACTCCCTGCTCGGAAGGTTTGTGGACCAGGTGTTTGAACATCAGGCAGGCAAA 863975
Query 13668 ATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCAT 13727
||||| || | ||||||||||| ||||||||||| || ||||| || | || |||||
Sbjct 863976 GTCACAGTGTAAACCCTCATCTCTGCTAATAAGTTCATTGGAAAACGTGAGGCCAGGCAT 864035
Query 13728 CAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTC 13787
|| | ||||| || | ||| ||||| | | || || || |||||||| ||||| ||
Sbjct 864036 CAGGCTGCGTTTCTTGAGCCAGAATATCGACTCAAAAGAACCAGAAAAGAAGATTCCTTC 864095
Query 13788 AACTGCAGCAAACGCTATTAGTCGTTCTCCAAACGATGCTTTTTTGTTTGATATCCATTT 13847
|| |||||||| | | | ||||| || | | || | ||||| |||||
Sbjct 864096 CACAGCAGCAAAGTCCACAACCCGTTCCCCGTAGGTAGCCTCTTTGTCCCCGATCCAACG 864155
Query 13848 TCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCGATTGCATTGAATAAATG 13907
||||| | | | || || | | || |||||| || || || ||||| | |
Sbjct 864156 CAAGGCCCAGGCTGCCTCCTTCTTTACACAAGGCATTGTCTCCATGGCGTTGAAGAGAAA 864215
Query 13908 TTCCTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTG 13967
|||| | |||| | | | |||||| || ||||| || | |||||||| ||||| ||
Sbjct 864216 TTCCCTTTCTTCGGAATCTTTAATGTAAGTGTCAATGAGGAGACTATACATCTCAGAATG 864275
Query 13968 TATGTTTTCTATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTG 14014
|||||||| || | || || || ||||| ||||| | |||||||
Sbjct 864276 AATGTTTTCCATGGTAATTTGGAAGCCATAGAAACAGCGGGCTTCTG 864322
>seq1832
Length=302895
Score = 123 bits (136), Expect = 2e-23
Identities = 547/861 (64%), Gaps = 15/861 (2%)
Strand=Plus/Plus
Query 13354 GAAATAACGCCCATTTTTTGATATTCACTAACTCTTTTTTCAAAAAAGTTAGTTTTACCT 13413
|| || || || || | ||||| |||| |||| || ||||| | |||||| || |||
Sbjct 206447 GACATCACTCCTATCCTCTGATACTCACCTCCTCTCTTCTCAAAGAGGTTAGTCTTCCCT 206506
Query 13414 TCCAGTGATATATTTTCCATAAAATCGAATGGATTTGTTGACATAAACACTTTATCACAA 13473
|||||||| ||||| ||||||| || ||||||||| | | | || || | ||
Sbjct 206507 TCCAGTGAAATATTCTCCATAAGGTCAAATGGATTTTCTACTCTGGAAACCTTGCTAAAA 206566
Query 13474 CCTAGTTCTAATAATAATCTATCAGCAATAAACTCAATATATTGAGACATTAAATCACAA 13533
|||||||| | || || || || || |||||||| || ||||| |||
Sbjct 206567 CCTAGTTCCTGCCTAAGTCAGTCTGCCATGAATTCAATATACTGCTTTATTAACATGCAA 206626
Query 13534 TTCATACCTATTAGTTTTACAGGAATTATATTAGTTAAAAATTCTTTTTCTATAGACACA 13593
||||| || || || || | || | | | | || || | ||||| ||
Sbjct 206627 TTCATCCCAATGAGCTTCAGCGGCAAGGCCTCTGGGAGGAACTCCTGGTCTATCCTAACG 206686
Query 13594 GCCTCGTTTATAATAATCTTAATAATGTCATTAGAAGGAGGATATTTTAGATGTTTAAAA 13653
|| | | | || || ||| | | | | ||||| || || ||||| ||
Sbjct 206687 GCTTTGATAATTATTTCCTTCACTCTCTGCTCTGAAGGTTTATGGACCAGGTGTTTGAAC 206746
Query 13654 ATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAAT 13713
|| | | ||||| |||| || | ||||||||||| |||||||| || || |||||
Sbjct 206747 ATCAGGTAGGCAAAGTCACGGTGTAAACCCTCATCTCTGCTAATAAGCTCATTGGAAAAC 206806
Query 13714 -GTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGA 13772
|| | || ||||||| | | ||| || | ||| |||| || | || || |
Sbjct 206807 AGTGAGGCCAGGCATCAGGCTGCATTTCTTGAGCCAGTATATCAACGCAGAAGAACCAAA 206866
Query 13773 AAAGAATATTCCCTCAACTGCAGCAAACGCTATTAGTCGTTCTCCAAACGATGCTTTTTT 13832
|||| | ||||| || |||||||| | | | | ||| || | | || | |||
Sbjct 206867 AAAGGAGATTCCTTCCGTGGCAGCAAAGTCCACAACCCATTCCCCGTAGGTAGCCTCTTT 206926
Query 13833 GTTTGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCGAT 13892
|| | ||| | ||||| | | || || | | || |||||| || ||
Sbjct 206927 GTCCCCAACCCAATGCAAGGCCCAATTTGCCTTCTTCCTTCCACAAGGCATTGTCTCCAT 206986
Query 13893 TGCATTGAATAAATGTTCCTTCTCTTTAGTA-CTTGAAATGTATGTATCAATAAGTAAGC 13951
| ||||| | | |||| ||||||| | | ||| || || || ||| | || | |
Sbjct 206987 GGTGTTGAAGAGAAATTCCCTCTCTTTGGAATCTT---ATATAAGTGTCAGTGAGGAGAC 207043
Query 13952 TATACATTTCAGAGTGTATGTTTTCTATAGCTATCTGAAAACCATAAAAACATCTAGCTT 14011
|| |||| ||||| || |||||||| || || || || || ||||| ||||| | ||||
Sbjct 207044 TACACATCTCAGAATGGATGTTTTCCATGGCAATTTGGAAGCCATAGAAACAGCAGGCTT 207103
Query 14012 CTGACCATTGTACCTCCGAGTAAAATCTTTCTGCCAAGTTTTCATTAACAATACCATCAC 14071
||| | || ||||| | | | | || ||||||||||||| || || ||| |||
Sbjct 207104 CTGTCATCTGAACCTCTTGGCCACACCACTCCACCAAGTTTTCATTTACTATGCCAACAC 207163
Query 14072 TAGCTGCAAAAAATGCCA------ATATGTTTTTAATAAAGTATTGCTCTTCATTGTTGA 14125
| || |||| || |||| | || ||||| | | ||| ||| || |
Sbjct 207164 TTGCCACAAAGAAAGCCAGAACGTGAACGTGGGGTATAAAATCTCTCTCCTCAGGCTTCA 207223
Query 14126 GTTTTTTCCAATCGGCTAAA--TCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACT 14183
| || ||| | ||| || ||||| ||||||| || || | | |||||||||||
Sbjct 207224 GGGATTCCCAGT--GCTGAATGTCCTTGGAAAGATTCACCTCTTTAGCTGTCCAAAAAGA 207281
Query 14184 AGCGACAGCTTTTTTATACAT 14204
||| ||||||| ||| ||||
Sbjct 207282 AGCCTCAGCTTTCTTACACAT 207302
>seq148
Length=4816872
Score = 102 bits (112), Expect = 8e-17
Identities = 104/136 (76%), Gaps = 0/136 (0%)
Strand=Plus/Plus
Query 13682 CCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGttttt 13741
|||||||||| ||||||||||| || ||||| || | || ||||||| || ||||| |
Sbjct 2362149 CCTCATCTCTGCTAATAAGTTCATTGGAAAAGGTGAGGCCAGGCATCAGGCCGCGTTTCT 2362208
Query 13742 ttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAACG 13801
| | ||| ||||| | || || || || |||||||| ||||| || || |||||||| |
Sbjct 2362209 TGAGCCAGAATATCGACGCAAAAGAACCAGAAAAGAAGATTCCTTCCACAGCAGCAAAAG 2362268
Query 13802 CTATTAGTCGTTCTCC 13817
| | | ||||||||
Sbjct 2362269 CCACAACCCGTTCTCC 2362284
Score = 91.5 bits (100), Expect = 1e-13
Identities = 105/139 (76%), Gaps = 2/139 (1%)
Strand=Plus/Plus
Query 13312 TAAAAATCAACATCTAATGAAAAAACATTATCGTCTTTGT-TAGAAATAACGCCCATTTT 13370
|| || ||| |||| || | |||| ||| || | || | | || || || ||||| |
Sbjct 2360427 TAGAAGTCAGCATCCAAGGTAAAAGAATTCTC-TGTTGGACTTGACATCACTCCCATCCT 2360485
Query 13371 TTGATATTCACTAACTCTTTTTTCAAAAAAGTTAGTTTTACCTTCCAGTGATATATTTTC 13430
||||| || | ||||| || ||||| |||||||| || ||||||||||| ||||| ||
Sbjct 2360486 CTGATACTCGCCTACTCTCTTCTCAAAGAAGTTAGTCTTCCCTTCCAGTGAAATATTCTC 2360545
Query 13431 CATAAAATCGAATGGATTT 13449
|||||| || |||||||||
Sbjct 2360546 CATAAAGTCAAATGGATTT 2360564
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 478565510672520
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