Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Odobenus_20rosmarus_20divergens_20[refseq_20GCF_5F000321225.1_202013
-01-16] 3,893 sequences; 2,400,150,193 total letters
Query= NC_004105.1
Length=209771
Score E
Sequences producing significant alignments: (Bits) Value
seq1020 338 8e-88
seq417 241 2e-58
seq1832 210 3e-49
seq148 129 8e-25
seq3 129 8e-25
seq158 120 4e-22
>seq1020
Length=850931
Score = 338 bits (374), Expect = 8e-88
Identities = 646/943 (69%), Gaps = 18/943 (2%)
Strand=Plus/Minus
Query 41714 TTTCT-TTAAAAGTCAACATCTAAAGAAAAATGATTGTCTTCTTGA---GACATAACTCC 41769
||||| ||| |||||| |||| || | |||| ||| ||| | || ||||| | |||
Sbjct 339111 TTTCTCTTAGAAGTCAGCATCCAAGGTAAAAGAATTCTCTGTTGGACTTGACATCATTCC 339052
Query 41770 CATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTCTTTCCTTCCAATGATAT 41829
||| | || ||||| || || | || || ||| |||||||| ||||||| ||| ||
Sbjct 339051 CATCCTCTGATATTCGCCTACTCTCTTCTC---AAAGTTAGTCTTCCCTTCCAGTGAAAT 338995
Query 41830 ATTTTCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGA 41889
||| ||||| || ||||| ||||| || | ||| || ||| || | ||
Sbjct 338994 ATTCTCCATAAAGTCAAATGGATTTTCTACTCTGAAAACCTTGCCAAAACCTAGCTCCAG 338935
Query 41890 AATCAATCTATCTGCGATGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTAT 41949
|| | || ||||| | ||| || ||||| ||||| | | |||||||| || ||
Sbjct 338934 CATAAGTCGGTCTGCCACGAACTCAATATACTGCTTCATTAATGTGCAATTCATCCCAAT 338875
Query 41950 AAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTAT 42009
|| || || || | ||| | || || || || || || || || || | | ||
Sbjct 338874 GAGCTTCACAGGCAAGGCCTCCGTGAGGAACTCCTGCTCTATCCGAACGGCAT---TAAT 338818
Query 42010 AATAGAT--CTT-ACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAACATCAAACA 42066
||| | ||| ||| | | || ||| | | | ||||| ||||||| ||
Sbjct 338817 AATTATTTCCTTCACTCTCTGCTCGGAAGGTTTGTGGACCAGGTGTTTGAACATCAGGCA 338758
Query 42067 TGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGTCC 42126
|| || || ||||| | |||||||||||| ||| | | ||| |||||||| | ||| ||
Sbjct 338757 GGCAAAGTCACAGTGTAAACCCTCATCTCTGCTAGTAAGTTCATTGGAAAAGGCGAGGCC 338698
Query 42127 GGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAGAT 42186
||||| |||||||| || || ||||| ||||| || ||||| || |||||||||| |||
Sbjct 338697 AGGCATCAGGCCACGTTTCTTGAGCCAGAATATCGATGCAAAAGAACCAGAAAAGAGGAT 338638
Query 42187 TCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCACTGTCATGTAT 42243
|||||| || || ||||| || | || | || || || ||| | |||| |
Sbjct 338637 TCCTTCCACAGCAGCAAAAGCCACAACCCGTTCCCCGTAGGTACCCTCTTTGTCCCCAGT 338578
Query 42244 CCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAA 42303
||| | |||||||| |||||||| |||||||||||||| || || ||||| || ||
Sbjct 338577 CCAATGCAAGGCCCAATCTGCCTTCTTCTTTACACAAGGCATTGTCTCGATGGCGTTGAA 338518
Query 42304 GAGATAGtttttttCATTACTATCTTTAACATATGTATCGATCAAAAGACTATACATTTC 42363
|||| | | |||| || |||||||| ||| || || | | ||||| ||||| ||
Sbjct 338517 GAGAAATTCCCTTTCTTTGGAATCTTTAATATAAGTGTCAGTGAGGAGACTGTACATCTC 338458
Query 42364 TGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCTCGGTAACCTG 42423
||||| |||||||| ||||| | || || | |||||||| | ||| || |||| |||
Sbjct 338457 AGAATGGATGTTTTCCATGGCAAATTGGAAGTCATAGAAACAGCGGGCTTCTGTAATCTG 338398
Query 42424 TACTTCTGTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTCACTGGCTGCAAA 42483
|||||| | ||| || || | || ||||| || || || || ||||| ||||||||
Sbjct 338397 AACTTCTTGGCTAAACCGCTCCACCAAGTTTTCATTTACGATGCCATCACTCGCTGCAAA 338338
Query 42484 AAACGCCAATACATGTTTTATAAAATATTTTTCGTCCGGTGTTAATTTATT-CCAATCAT 42542
|| |||| || || |||||| ||| | || || || || | ||| ||| | |
Sbjct 338337 GAAAGCCAGAACGTGGGATATAAAGTATCTCTCCTCAGG-CTTCAGGGATTCCCAGTGCT 338279
Query 42543 TGATATCTTTAGATATATCTACTTCTTCTACCGTCCAAAATGATGCTTCTGCCTTTTTAT 42602
|| || || || | ||| || | ||| | |||||||| || || || || || ||||
Sbjct 338278 GAATGTCCTTGGAAAGATCCACCTTTTCAGCTGTCCAAAAGGAAGCCTCAGCTTTCTTAT 338219
Query 42603 ACATATTCCAGATATCATGATATTGAATTGGGAAAATAACAAA 42645
|| | | ||| |||||| || | || ||||| || |||||
Sbjct 338218 ACCTCTGCCAAATATCACAGTACTCGATGGGGAAGATGACAAA 338176
>seq417
Length=2207251
Score = 241 bits (266), Expect = 2e-58
Identities = 284/384 (74%), Gaps = 3/384 (1%)
Strand=Plus/Plus
Query 42050 TGTTTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCG 42109
||||| ||||||| || || || || ||||| | |||||||||||| ||||| | |||
Sbjct 863953 TGTTTGAACATCAGGCAGGCAAAGTCACAGTGTAAACCCTCATCTCTGCTAATAAGTTCA 864012
Query 42110 TTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAAT 42169
|||||||||||||| || ||||| |||| || || || ||||| ||||| ||| ||||
Sbjct 864013 TTGGAAAACGTGAGGCCAGGCATCAGGCTGCGTTTCTTGAGCCAGAATATCGACTCAAAA 864072
Query 42170 GATCCAGAAAAGAAGATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATA---A 42226
|| |||||||||||||||||||| || || |||||| | | || | || || || |
Sbjct 864073 GAACCAGAAAAGAAGATTCCTTCCACAGCAGCAAAGTCCACAACCCGTTCCCCGTAGGTA 864132
Query 42227 CCGGCACTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATC 42286
| | |||| ||||| ||||| | |||| ||| ||||||||||||||
Sbjct 864133 GCCTCTTTGTCCCCGATCCAACGCAAGGCCCAGGCTGCCTCCTTCTTTACACAAGGCATT 864192
Query 42287 GTTTCTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCGATC 42346
|| || ||||| || |||||| | | |||| | |||||||| || || || ||
Sbjct 864193 GTCTCCATGGCGTTGAAGAGAAATTCCCTTTCTTCGGAATCTTTAATGTAAGTGTCAATG 864252
Query 42347 AAAAGACTATACATTTCTGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACAT 42406
| ||||||||||| || |||||||||||||| |||| || || || || ||||||||
Sbjct 864253 AGGAGACTATACATCTCAGAATGAATGTTTTCCATGGTAATTTGGAAGCCATAGAAACAG 864312
Query 42407 CTGGCCTCGGTAACCTGTACTTCT 42430
| ||| || |||| ||| ||||||
Sbjct 864313 CGGGCTTCTGTAATCTGAACTTCT 864336
>seq1832
Length=302895
Score = 210 bits (232), Expect = 3e-49
Identities = 594/901 (66%), Gaps = 20/901 (2%)
Strand=Plus/Plus
Query 41759 GACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTCTTTCCT 41818
||||| ||||| || | || || ||||| | | || || || | |||||||| |||
Sbjct 206447 GACATCACTCCTATCCTCTGATACTCACCTCCTCTCTTCTCAAAGAGGTTAGTCTTCCCT 206506
Query 41819 TCCAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAAT 41878
|||| ||| ||||| ||||| | ||||| ||||| || | ||| || ||||
Sbjct 206507 TCCAGTGAAATATTCTCCATAAGGTCAAATGGATTTTCTACTCTGGAAACCTTGCTAAAA 206566
Query 41879 CCCAATTCAGAAATCAATCTATCTGCGATGAATTCTATATA-TGTTTTCATCATTTCACA 41937
|| | ||| | | || ||||| |||||||| ||||| || ||| | | | ||
Sbjct 206567 CCTAGTTCCTGCCTAAGTCAGTCTGCCATGAATTCAATATACTGCTTTATTAACATG-CA 206625
Query 41938 ATTCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGAC 41997
|||||| || || || || | || | ||| | | || || || || || || ||
Sbjct 206626 ATTCATCCCAATGAGCTTCAGCGGCAAGGCCTCTGGGAGGAACTCCTGGTCTATCCTAAC 206685
Query 41998 CGCGTCTGTTATAATAGATCTTACTGTTTCTTCACTC--GGTGGATACAATAAATGTTTA 42055
|| | || || | || || | | | ||| | || ||| || | | |||||
Sbjct 206686 GGCTT-TGATA-ATTATTTCCTTCACTCTCTGCTCTGAAGGTTTATGGACCAGGTGTTTG 206743
Query 42056 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAA 42115
||||||| | || || || | ||| | |||||||||||| ||||| | || ||||||
Sbjct 206744 AACATCAGGTAGGCAAAGTCACGGTGTAAACCCTCATCTCTGCTAATAAGCTCATTGGAA 206803
Query 42116 AAC-GTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCC 42174
||| ||||| || ||||| |||| | || || ||||| |||| ||||| | || ||
Sbjct 206804 AACAGTGAGGCCAGGCATCAGGCTGCATTTCTTGAGCCAGTATATCAACGCAGAAGAACC 206863
Query 42175 AGAAAAGAAGATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGC 42231
| ||||| |||||||||| || |||||| | | || | || || || | | |
Sbjct 206864 AAAAAAGGAGATTCCTTCCGTGGCAGCAAAGTCCACAACCCATTCCCCGTAGGTAGCCTC 206923
Query 42232 ACTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTC 42291
|||| | ||| | ||||||| |||||||| || |||||||||| || ||
Sbjct 206924 TTTGTCCCCAACCCAATGCAAGGCCCAATTTGCCTTCTTCCTTCCACAAGGCATTGTCTC 206983
Query 42292 TATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCGATCAAAAG 42351
|||| || |||||| | | | || || ||||| | ||| || || | | ||
Sbjct 206984 CATGGTGTTGAAGAGAAATTCCCTCTCTTTGGAATCTT--ATATAAGTGTCAGTGAGGAG 207041
Query 42352 ACTATACATTTCTGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGC 42411
|||| |||| || ||||| |||||||| ||||| || || || || |||||||| | |||
Sbjct 207042 ACTACACATCTCAGAATGGATGTTTTCCATGGCAATTTGGAAGCCATAGAAACAGCAGGC 207101
Query 42412 CTCGGTAACCTGTACTTCTGTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTC 42471
|| || | ||| || ||| | | | | || | || ||||| || ||||| || |
Sbjct 207102 TTCTGTCATCTGAACCTCTTGGCCACACCACTCCACCAAGTTTTCATTTACTATGCCAAC 207161
Query 42472 ACTGGCTGCAAAAAACGCCA------ATACATGTTTTATAAAATATTTTTCGTCCGGTGT 42525
||| || |||| || |||| || || |||||||| | | || || || |
Sbjct 207162 ACTTGCCACAAAGAAAGCCAGAACGTGAACGTGGGGTATAAAATCTCTCTCCTCAGG-CT 207220
Query 42526 TAATTTATT-CCAATCATTGATATCTTTAGATATATCTACTTCTTCTACCGTCCAAAATG 42584
| | ||| ||| | | || || || || | || || |||| | |||||||| |
Sbjct 207221 TCAGGGATTCCCAGTGCTGAATGTCCTTGGAAAGATTCACCTCTTTAGCTGTCCAAAAAG 207280
Query 42585 ATGCTTCTGCCTTTTTATACATATTCCAGATATCATGATATTGAATTGGGAAAATAACAA 42644
| || || || || ||| |||| | ||| | ||||||||| | || ||||| || | ||
Sbjct 207281 AAGCCTCAGCTTTCTTACACATCTGCCAAAGATCATGATACTCCATAGGGAAGATGAGAA 207340
Query 42645 A 42645
|
Sbjct 207341 A 207341
>seq148
Length=4816872
Score = 129 bits (142), Expect = 8e-25
Identities = 101/121 (83%), Gaps = 0/121 (0%)
Strand=Plus/Plus
Query 42087 CCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 42146
|||||||||| ||||| | ||| |||||||| ||||| || ||||| ||||| || || |
Sbjct 2362149 CCTCATCTCTGCTAATAAGTTCATTGGAAAAGGTGAGGCCAGGCATCAGGCCGCGTTTCT 2362208
Query 42147 TAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAGATTCCTTCTACTGCCGCAAAGG 42206
| ||||| ||||| |||||||| || |||||||||||||||||||| || || ||||| |
Sbjct 2362209 TGAGCCAGAATATCGACGCAAAAGAACCAGAAAAGAAGATTCCTTCCACAGCAGCAAAAG 2362268
Query 42207 C 42207
|
Sbjct 2362269 C 2362269
>seq3
Length=9835568
Score = 129 bits (142), Expect = 8e-25
Identities = 110/136 (81%), Gaps = 0/136 (0%)
Strand=Plus/Plus
Query 71143 ACTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATACGGTTCCACT 71202
|| ||||||||||| ||||| ||||| ||||| || || || |||||||| ||||| |
Sbjct 152606 ACCTGAAATTCTCCTGACAAGACTCTGCGAGTATAGATGTTGCTGGTATAAGGTTCAATG 152665
Query 71203 GACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAGA 71262
|||||||||||||||| ||| ||||||||||| ||||| ||||| || || | | || |
Sbjct 152666 GACTCATTATTTCCCAGAATCTGAGCAGTTGAAGCAGTAGGCATCGGGGCAATAAGTAAA 152725
Query 71263 CTATTTCTAAGACCAT 71278
|| ||||| | |||||
Sbjct 152726 CTGTTTCTTATACCAT 152741
Score = 114 bits (126), Expect = 2e-20
Identities = 128/171 (75%), Gaps = 0/171 (0%)
Strand=Plus/Plus
Query 70868 TCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAGCTAGGATCGGCTATGTGAATAT 70927
|||| ||||| ||||||||||| || |||||| |||| |||| || || ||||| || |
Sbjct 150104 TCCAGCCGTAGAAATGCATACTGGTGAGTTTGCCATAGTTAGGCTCAGCGATGTGGATGT 150163
Query 70928 TCATCGACTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCT 70987
||| || || |||||||| ||||| || || || || || ||||| || | | || |
Sbjct 150164 TCAAAGATTGGCTTTGATCAATGAAAGCACCTCTTTCAGCTGCCATCTTAAGAACGGTTT 150223
Query 70988 TTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAA 71038
| |||| ||||||||| | || ||||||| | |||| | || || ||||
Sbjct 150224 TCTGTGAAATTTCCCACACGGTCTTATAAAGTTGCTTCAGGTCATCAGGAA 150274
Score = 104 bits (114), Expect = 3e-17
Identities = 137/190 (72%), Gaps = 0/190 (0%)
Strand=Plus/Plus
Query 71381 CATATGTATCGTATGGTCCTTCTTTTTCGGCTAGTTCACAACTCGCCTCTAATGCTCCAT 71440
|||| || || ||||| || | | | ||| || ||||| || || || || |||||||
Sbjct 157356 CATAGGTTTCATATGGGCCATGCTCCTTGGCCAGGTCACAGCTGGCTTCCAAGGCTCCAT 157415
Query 71441 AATAAATGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCCGGGCTATCAAATGGAT 71500
||||||||||||| || |||| |||||| || || ||||| || || ||||| ||||
Sbjct 157416 AATAAATGGTTTCAAAGATCTGCTTATTCAGTAGCTGGGCTTCTGGACTCTCAAAAGGAT 157475
Query 71501 AATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACGCCAATACCGATAGGTCTGTGTC 71560
| | | |||||||| || ||||| | ||||| || || || || || || | || |
Sbjct 157476 ACCTCATCAGAATAAAAGCATCTGCCAGACCTTGTACCCCGATTCCAATGGGGCGATGGC 157535
Query 71561 TCTTATTAGA 71570
||||| ||
Sbjct 157536 GTTTATTTGA 157545
Score = 93.3 bits (102), Expect = 6e-14
Identities = 101/134 (75%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 72022 ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGC 72081
||||||||||| |||||||| ||||||||||| || | || || || |||| | ||
Sbjct 162121 ACTCGTTTCATGAAGAGATCTGGAATCCAAAGGGCAAAGAAAAGGTCCCTGGCACGCTGT 162180
Query 72082 TCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGT 72141
|| || |||||||| ||||| || | ||| || ||| | | ||| || ||||||| ||
Sbjct 162181 TCTTCCTTTCCTGTGTTCTTCTTTAAATCCAGAAACTCAAAAATGTCTAAATGCCAAGGC 162240
Query 72142 TCCAAGTATATGGC 72155
|||| ||| || ||
Sbjct 162241 TCCAGGTAAATAGC 162254
>seq158
Length=7371824
Score = 120 bits (132), Expect = 4e-22
Identities = 107/134 (80%), Gaps = 0/134 (0%)
Strand=Plus/Minus
Query 42089 TCATCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTA 42148
|||||||| || || | ||| ||||||||||||||||||||||| || || | || ||
Sbjct 3463986 TCATCTCTGCTGATGAGTTCATTGGAAAACGTGAGTCCGGGCATGAGACCTCTTTTCTTT 3463927
Query 42149 AGCCAAAATATAGACGCAAATGATCCAGAAAAGAAGATTCCTTCTACTGCCGCAAAGGCA 42208
||||| ||||||| ||||| ||||| || ||||| ||||||||||| || ||||| ||
Sbjct 3463926 AGCCAGAATATAGCAGCAAAAGATCCCGAGAAGAAAATTCCTTCTACAGCAGCAAAAGCC 3463867
Query 42209 ATAAGTCTCTCTCC 42222
| || ||| || ||
Sbjct 3463866 ACAACTCTTTCCCC 3463853
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 671106540688680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |