Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Odobenus_20rosmarus_20divergens_20[refseq_20GCF_5F000321225.1_202013
-01-16] 3,893 sequences; 2,400,150,193 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq1020 158 2e-33
seq417 95.1 2e-14
>seq1020
Length=850931
Score = 158 bits (174), Expect = 2e-33
Identities = 575/882 (65%), Gaps = 35/882 (4%)
Strand=Plus/Plus
Query 124998 TTTCCCATCAGGTATCATGACATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGG 125057
|| |||||| ||| ||| |||||| | | ||| || || ||| |||| |||||||||
Sbjct 338185 TTCCCCATCGAGTACTGTGATATTTGGCAGAGGTATAAGAAAGCTGAGGCTTCCTTTTGG 338244
Query 125058 ACGGTCGAAGAGGTCGATCTGTCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAA 125117
|| | ||| |||| ||||| ||||||||| | | | ||||| | | | ||||
Sbjct 338245 ACAGCTGAAAAGGTGGATCTTTCCAAGGACATTCAGCACTGGGAATCCCTGAAGCCTGA- 338303
Query 125118 ACTGAGCGAGAGTTTATATCGCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTC 125177
||| || | |||||||| ||| || |||| |||||||| | ||||| |||||
Sbjct 338304 --GGAGAGATACTTTATATCCCACGTTCTGGCTTTCTTTGCAGCGAGTGATGGCATCGTA 338361
Query 125178 AACGACAATCTGTTGACACGATTCTCTCAAG-AGTTGACCATTCCAGAGGTGTCGTGCTT 125236
|| || || || || || || |||| |||| | ||| |||| | || ||
Sbjct 338362 AATGAAAACTTGGTGGAGCGGTTTAGCCAAGAAGTTCA-GATTACAGAAGCCCGCTGTTT 338420
Query 125237 TTACGGATTCCAAATCATGATTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGA 125296
|| | |||||| | || || ||| | || || || |||||| | || | |||
Sbjct 338421 CTATGACTTCCAATTTGCCATGGAAAACATCCATTCTGAGATGTACAGTCTCCTCACTGA 338480
Query 125297 CATGTACATTCGCGATCCGCAACGTAA-ACACATGCTCTTTAACGCAATCGACACGGTGC 125355
|| || ||| ||| | ||| | || | | ||||| ||||| ||||| || |||
Sbjct 338481 CACTTATATTAAAGATTC-CAAAGAAAGGGAATTTCTCTTCAACGCCATCGAGACAATGC 338539
Query 125356 CGTCTATACGTAAAAAGGCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGT 125415
| | | || || ||||| | |||| | | |||| | ||| | || | | |
Sbjct 338540 CTTGTGTAAAGAAGAAGGCAGATTGGGCCTTGCATTGGACTGGGGACAAAGAGGGTACCT 338599
Query 125416 ACGCCGACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTG 125475
||| || | | ||||| || || || || || || ||| ||||||| ||| |||||
Sbjct 338600 ACGGGGAACGGGTTGTGGCTTTTGCTGCTGTGGAAGGAATCCTCTTTTCTGGTTCTTTTG 338659
Query 125476 CGGCCATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGT--AACGA 125533
| | || || ||||||||||| || || || ||||| || || ||| | || ||
Sbjct 338660 CATCGATATTCTGGCTCAAGAAACGTGGCCTGATGCCTGGCCT--CGCCTTTTCCAATGA 338717
Query 125534 GTTTA-TATCTCGAGACGAGGGCCTACACTGTGACTTTGCCATTCTACTGTTTCGCAACT 125592
||| || | |||| ||||| ||||||||||||||||| || |||| |||
Sbjct 338718 ACTTACTAGC-AGAGATGAGGGTTTACACTGTGACTTTGCCTGCCTGATGTT---CAAAC 338773
Query 125593 ATCTGCGTCCCGA---GTGCAGATCCAGCGATGAAAAGGTCATCAACATTGTAACCGATG 125649
| ||| |||| | | | || ||| || | |||| || | ||| |||
Sbjct 338774 ACCTG-GTCCACAAACCTTCCGA-GCAGAGA-GTGAAGGAAATAATTATT------AATG 338824
Query 125650 CCGTGAGGATAGAACAAGAGTTTCTAACCGAATCCCTACCGGTCAGCATGATTGGCATGA 125709
|||| ||||||| || ||||| || || || || | || || | | ||||| ||||
Sbjct 338825 CCGTTCGGATAGAGCAGGAGTTCCTCACGGAGGCCTTGCCTGTGAAGCTCATTGGGATGA 338884
Query 125710 ACTGCAAGCTAATGTGCGAGTACATAGAGTTTGTGGCAGATCGTCTACTGTACGAGTT-- 125767
| |||| ||||| |||| || ||||| |||||||| || || || ||| |
Sbjct 338885 ATTGCACATTAATGAAGCAGTATATTGAGTTCGTGGCAGACCGACTTATGCTGGAGCTAG 338944
Query 125768 GATTGGCCGCAAGATTTACAACGCCAAGAATCCCTTTGATTTCATGACCAGCATATCACT 125827
| || | ||||| ||| || | | ||||| ||||| || ||| | || |||||
Sbjct 338945 GTTTTG--GCAAGGTTTTCAGAGTAGAAAATCCATTTGACTTTATGGAGAATATTTCACT 339002
Query 125828 AGAGGGTAAGACCAACTTTTTCGAGAAGAAGGTCAGCGAGTA 125869
|| || ||||| |||||| ||||||| || |||| ||
Sbjct 339003 GGAAGGGAAGACTAACTTT---GAGAAGAGAGTAGGCGAATA 339041
>seq417
Length=2207251
Score = 95.1 bits (104), Expect = 2e-14
Identities = 411/643 (64%), Gaps = 19/643 (3%)
Strand=Plus/Minus
Query 125232 TGCTTTTACGGATTCCAAATCATGATTGAGAACGTGCACTCGGAAATGTACTCTACACTG 125291
|| || || || |||||||| | || || ||| | || || || ||||| | ||
Sbjct 864311 TGTTTCTATGGCTTCCAAATTACCATGGAAAACATTCATTCTGAGATGTATAGTCTCCTC 864252
Query 125292 ATTGACATGTACATTCGCGATCCGCAACGTAAACACATGCTCTTTAACGCAATCGACACG 125351
||||||| |||||| ||| | || | | | ||||| ||||| || || ||
Sbjct 864251 ATTGACACTTACATTAAAGATTCCGAAGAAAGGGAATTTCTCTTCAACGCCATGGAGACA 864192
Query 125352 GTGCCGTCTATACGTAAAAAGGCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCT 125411
|||| | | || || |||| |||| | || ||||||| ||| | || ||
Sbjct 864191 ATGCCTTGTGTAAAGAAGGAGGCAGCCTGGGCCTTGCGTTGGATCGGGGACAAAGAGGCT 864132
Query 125412 TCGTACGCCGACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGT 125471
| |||| || | | |||| || || || || || || ||||||||||| ||| |
Sbjct 864131 ACCTACGGGGAACGGGTTGTGGACTTTGCTGCTGTGGAAGGAATCTTCTTTTCTGGTTCT 864072
Query 125472 TTTGCGGCCATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAAC 125531
|||| | | || || ||||||||||| ||| | || ||||| || || ||| ||
Sbjct 864071 TTTGAGTCGATATTCTGGCTCAAGAAACGCAGCCTGATGCCTGGCCTCACGTTTTCCAAT 864012
Query 125532 GAGTTTATATCTCGAGACGAGGGCCTACACTGTGACTTTGCCATTCTACTGTTTCGCAAC 125591
|| |||| |||| ||||| ||||||||||||||||| || |||| |||
Sbjct 864011 GAACTTATTAGCAGAGATGAGGGTTTACACTGTGACTTTGCCTGCCTGATGTT---CAAA 863955
Query 125592 TATCTGCGTCCCGA---GTGCAGATCCAGCGATGAAAAGGTCATCAACATTGTAACCGAT 125648
| ||| |||| | | | || ||| || | |||| || | ||| ||
Sbjct 863954 CACCTG-GTCCACAAACCTTCCGA-GCAGGGA-GTGAAGGAAATAATTATT------AAT 863904
Query 125649 GCCGTGAGGATAGAACAAGAGTTTCTAACCGAATCCCTACCGGTCAGCATGATTGGCATG 125708
||||| |||||| || | || | | || || | || | | | ||||| |||
Sbjct 863903 GCCGTTCAGATAGAGCAGGGATTCATCAAGGAGGCCTTGCCCATGAAGTTCATTGGGATG 863844
Query 125709 AACTGCAAGCTAATGTGCGAGTACATAGAGTTTGTGGCAGATCGTCTACTGTACGAGTT- 125767
|| |||| | ||||| |||| || ||||| |||||||| || || || ||| |
Sbjct 863843 AATTGCATGTTAATGAAGCAGTATATTGAGTTCGTGGCAGACCGACTTATGCTGGAGCTA 863784
Query 125768 -GATTGGCCGCAAGATTTACAACGCCAAGAATCCCTTTGATTTCATGACCAGCATATCAC 125826
| || | ||||| ||| | | | ||||| ||||| | ||| | || ||||
Sbjct 863783 GGTTTTG--GCAAGGTTTTCGGAGTAGAAAATCCATTTGACTATATGGAGAATATTTCAC 863726
Query 125827 TAGAGGGTAAGACCAACTTTTTCGAGAAGAAGGTCAGCGAGTA 125869
| || || ||||| ||||| || | ||||| || |||||||
Sbjct 863725 TGGAAGGGAAGACTAACTTCTTTGTGAAGAGAGTAGGCGAGTA 863683
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 741023138206680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |