Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Odobenus_20rosmarus_20divergens_20[refseq_20GCF_5F000321225.1_202013 -01-16] 3,893 sequences; 2,400,150,193 total letters Query= NC_004778.3 Length=129593 Score E Sequences producing significant alignments: (Bits) Value seq47 91.5 1e-13 seq314 82.4 6e-11 seq85 82.4 6e-11 >seq47 Length=4803410 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 18833 ACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCCGCCATTGTTTTGGCGTCCTCC 18892 |||| ||||| || |||||||| || || ||||| || | || || |||||||| Sbjct 4289883 ACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCGTCCTCC 4289942 Query 18893 AGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACGGGCACGCCCTCTTTGTCGGCA 18952 ||||| || || ||| | || | |||||||| || ||| | |||||||||||| Sbjct 4289943 AGCTGCTTCCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGGATGCCCTCTTTGTCCTGG 4290002 Query 18953 ATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGGCTCCGTTTCGACGGTAATGGTTTTA 19012 || ||| || || | ||| || || | |||||| || | ||| ||||| ||| Sbjct 4290003 ATCTTCGCCTTGACATTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTA 4290062 Query 19013 CCTGTTAAAGTTTTGACAAAAATTTGCATT 19042 || || || || || ||||| || |||||| Sbjct 4290063 CCGGTCAAGGTCTTCACAAAGATCTGCATT 4290092 >seq314 Length=2398313 Score = 82.4 bits (90), Expect = 6e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 18832 CACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCCGCCATTGTTTTGGCGTCCTC 18891 ||||| ||||| || ||||| || || ||||| || || | || || | | || || Sbjct 2323439 CACCAAGTGCAGGGTGGACTCTTTCTGGATATTATAGTCTGACAGAGTACGGCCATCTTC 2323498 Query 18892 CAGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACGGGCACGCCCTCTTTGTCGGC 18951 ||||||||| |||||| |||| || | |||||| || || | |||||| ||||| Sbjct 2323499 CAGCTGTTTGCCCGCAAAAATCAGACGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCTTG 2323558 Query 18952 AATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGGCTCCGTTTCGACGGTAATGGTTTT 19011 ||||| ||| || | | | ||| || | ||||| |||| ||| ||||| || Sbjct 2323559 GATTTTGGCTTTGACATTCTCAATAGTGTCACTGGGCTCGACCTCGAGGGTGATGGTCTT 2323618 Query 19012 ACCTGTTAAAGTTTTGACAAAAATTTGCAT 19041 || || | || || ||||| || ||||| Sbjct 2323619 GCCCGTCAGGGTCTTCACAAAGATCTGCAT 2323648 >seq85 Length=4131313 Score = 82.4 bits (90), Expect = 6e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 18832 CACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCCGCCATTGTTTTGGCGTCCTC 18891 ||||| ||||| || ||||| || || ||||| || || | || || | | || || Sbjct 1818201 CACCAAGTGCAGGGTGGACTCTTTCTGGATATTATAGTCTGACAGAGTACGGCCATCTTC 1818260 Query 18892 CAGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACGGGCACGCCCTCTTTGTCGGC 18951 ||||||||| |||||| |||| || | |||||| || || | |||||| ||||| Sbjct 1818261 CAGCTGTTTGCCCGCAAAAATCAGACGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCTTG 1818320 Query 18952 AATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGGCTCCGTTTCGACGGTAATGGTTTT 19011 ||||| ||| || | | | || || | ||||| |||| ||| ||||| || Sbjct 1818321 GATTTTGGCTTTGACATTCTCAATAGCGTCACTGGGCTCGACCTCGAGGGTGATGGTCTT 1818380 Query 19012 ACCTGTTAAAGTTTTGACAAAAATTTGCAT 19041 ||||| | || || ||||| || ||||| Sbjct 1818381 GCCTGTCAGGGTCTTCACAAAGATCTGCAT 1818410 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414553130204842