Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Odobenus_20rosmarus_20divergens_20[refseq_20GCF_5F000321225.1_202013
-01-16] 3,893 sequences; 2,400,150,193 total letters
Query= NC_005839.2
Length=131680
Score E
Sequences producing significant alignments: (Bits) Value
seq530 95.1 1e-14
seq47 93.3 4e-14
seq174 91.5 1e-13
seq75 89.7 4e-13
seq33 86.0 5e-12
seq59 84.2 2e-11
seq29 82.4 6e-11
>seq530
Length=2118653
Score = 95.1 bits (104), Expect = 1e-14
Identities = 160/232 (69%), Gaps = 0/232 (0%)
Strand=Plus/Plus
Query 48499 ACCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGC 48558
|||||| || | || ||||| | |||||| ||| |||||||||||||||||| ||||
Sbjct 63785 ACCTCCACGAAGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGA 63844
Query 48559 CAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGG 48618
||| || | || ||||| ||||| || | | || | | ||||||||| |
Sbjct 63845 CAAAGTGCGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTCTGCTGATCAGGAGA 63904
Query 48619 CACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGT 48678
| | |||||| ||| ||| || ||| | | |||| ||||| | | ||
Sbjct 63905 AATTCCTTCCTTATCCTGAATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGTTCAAC 63964
Query 48679 CTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCATCGTG 48730
||||| || ||||| || || || || |||||||| |||||||||||| ||
Sbjct 63965 CTCGAGAGTGATGGTCTTCCCCGTAAGGGTTTTCACGAAAATCTGCATCCTG 64016
>seq47
Length=4803410
Score = 93.3 bits (102), Expect = 4e-14
Identities = 144/206 (70%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 48524 TGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGC 48583
|| || ||| |||||| || |||||||| |||| || ||| ||||||||||||||
Sbjct 4289889 TGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCGTCCTCCAGCTGC 4289948
Query 48584 TTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTC 48643
|| ||| | | || || | |||||| || || | | || |||||| || |||
Sbjct 4289949 TTCCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGGATGCCCTCTTTGTCCTGGATCTTC 4290008
Query 48644 TGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTG 48703
||||| | | | ||||| || | | |||| ||| | || ||||| ||||||||
Sbjct 4290009 GCCTTGACATTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTACCGGTC 4290068
Query 48704 AGAGTTTTCACAAAAATCTGCATCGT 48729
| || |||||||| |||||||| ||
Sbjct 4290069 AAGGTCTTCACAAAGATCTGCATTGT 4290094
Score = 87.8 bits (96), Expect = 2e-12
Identities = 141/203 (69%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 48524 TGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGC 48583
|| || ||| |||||| || |||||||| |||| || ||| ||||||||||||||
Sbjct 4289661 TGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCGTCCTCCAGCTGC 4289720
Query 48584 TTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTC 48643
|| ||| | | || || | |||||| || || | | ||||||||| || |||
Sbjct 4289721 TTCCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTC 4289780
Query 48644 TGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTG 48703
||||| | | | ||||| || | | |||| ||| | || ||||| || |||||
Sbjct 4289781 GCCTTGACATTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTC 4289840
Query 48704 AGAGTTTTCACAAAAATCTGCAT 48726
| || ||||| || ||||||||
Sbjct 4289841 AAGGTCTTCACGAAGATCTGCAT 4289863
Score = 82.4 bits (90), Expect = 6e-11
Identities = 140/203 (69%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 48524 TGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGC 48583
|| || ||| |||||| || |||||||| |||| || ||| |||||||||||||
Sbjct 4289433 TGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCGTCCTCCAGCTGT 4289492
Query 48584 TTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTC 48643
|| ||| | | || || | |||||| || || | | ||||||||| || |||
Sbjct 4289493 TTCCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTC 4289552
Query 48644 TGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTG 48703
||||| | | | ||||| || | | |||| ||| | || ||||| || |||||
Sbjct 4289553 GCCTTGACATTCTCGATGGTGTCACTGGGCTCCACCTCCAGAGTGATGGTCTTGCCGGTC 4289612
Query 48704 AGAGTTTTCACAAAAATCTGCAT 48726
| || ||||| || ||||||||
Sbjct 4289613 AAGGTCTTCACGAAGATCTGCAT 4289635
>seq174
Length=4297676
Score = 91.5 bits (100), Expect = 1e-13
Identities = 154/222 (69%), Gaps = 6/222 (3%)
Strand=Plus/Minus
Query 48512 CTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAA---TTGTCGC 48568
|| ||||| | |||||| ||| ||||||||||||| |||| ||| ||| |||||
Sbjct 3533512 CTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGCTGTAGTCACACAAAGTTTGTCT- 3533454
Query 48569 TCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCC 48628
||| ||||| ||||| || || | || | | ||||||||| || | | ||||
Sbjct 3533453 --GTCTTCCAGTTGCTTGCCAGCGAAGATCAGTCTCTGCTGATCAGGAGGAATTCCTTCC 3533396
Query 48629 TTGTCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTT 48688
|| ||| || || ||| | | ||| ||||| | || || |||||| ||
Sbjct 3533395 TTATCCTGGATCTTGGCCTTTACATTTTCTACTGTATCTGAGGATTCAATCTCGAGAGTG 3533336
Query 48689 ATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCATCGTG 48730
||||| || || | || ||||||||||||||||||||| ||
Sbjct 3533335 ATGGTCTTCCCCATAAGGGTTTTCACAAAAATCTGCATCTTG 3533294
>seq75
Length=4930459
Score = 89.7 bits (98), Expect = 4e-13
Identities = 159/232 (69%), Gaps = 0/232 (0%)
Strand=Plus/Plus
Query 48499 ACCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGC 48558
||| || || | |||||||| | |||||| ||| |||||||||||||||||| ||||
Sbjct 2283650 ACCACCACGAAGTCTTAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGA 2283709
Query 48559 CAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGG 48618
||| || | || |||| ||||| || | | || || | |||||||| ||
Sbjct 2283710 CAAAGTGCGTCCATCTCCCAGTTGCTTGCCAGCAAAGATCAACCTCTGCTGATGAGGAGG 2283769
Query 48619 CACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGT 48678
| | |||||| ||| ||| || ||| | | ||| ||||| | | || |
Sbjct 2283770 AATTCCTTCCTTATCCTGAATCTTGGCCTTTACATTTTCTAGTGTATCCGAGGGTTCAGC 2283829
Query 48679 CTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCATCGTG 48730
|| || || ||||| || || || || |||||||| |||||||||||| ||
Sbjct 2283830 CTTGAGAGTGATGGTCTTCCCCGTAAGGGTTTTCACGAAAATCTGCATCTTG 2283881
>seq33
Length=6086033
Score = 86.0 bits (94), Expect = 5e-12
Identities = 158/232 (68%), Gaps = 0/232 (0%)
Strand=Plus/Plus
Query 48499 ACCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGC 48558
||| || || | || ||||| | |||||| ||| |||||||||||||||||| ||||
Sbjct 2214768 ACCACCACGAAGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGA 2214827
Query 48559 CAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGG 48618
||| || | || ||||| ||||| || | | || | | ||||||||| ||
Sbjct 2214828 CAAAGTGCGTCCATCTTCCAGTTGCTTGCCAGCAAATATCAGTCTCTGCTGATCAGGAGG 2214887
Query 48619 CACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGT 48678
| | |||||| ||| ||| || ||| | | | || ||| | | | ||
Sbjct 2214888 AATTCCTTCCTTATCCTGAATCTTTGCCTTTACATTTTCCATTGTACCCGAGGGTTCAAC 2214947
Query 48679 CTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCATCGTG 48730
||||| || ||||| || || || || |||||||| |||||||||||| ||
Sbjct 2214948 CTCGAGAGTGATGGTCTTCCCCGTAAGGGTTTTCACGAAAATCTGCATCCTG 2214999
>seq59
Length=2579055
Score = 84.2 bits (92), Expect = 2e-11
Identities = 150/219 (68%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 48512 CTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCG 48571
|| ||||| | |||||| ||| |||||||||||||||||| |||| ||| || |
Sbjct 1130464 CTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTGCGTCCA 1130523
Query 48572 TCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTG 48631
|| ||||| ||||| || | | || | | ||||||||| || | | ||||||
Sbjct 1130524 TCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTCTGCTGATCAGGAGGAATTCCTTCCTTA 1130583
Query 48632 TCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATG 48691
||| ||| || ||| | | |||| ||||| | || | ||| || |||
Sbjct 1130584 TCCTGAATCTTGGCCTTTACATTTTCTATTGTATCCGAGCGTTCAACCGCGAGAGTGATG 1130643
Query 48692 GTTTTACCGGTGAGAGTTTTCACAAAAATCTGCATCGTG 48730
|| || || || || |||||||| |||||||||||| ||
Sbjct 1130644 GTCTTCCCCGTAAGGGTTTTCACGAAAATCTGCATCCTG 1130682
>seq29
Length=5782310
Score = 82.4 bits (90), Expect = 6e-11
Identities = 150/217 (69%), Gaps = 2/217 (1%)
Strand=Plus/Minus
Query 48512 CTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAAT-TGTCGCTC 48570
|| ||||| | |||||| ||| ||||||||||||||||| |||| |||| ||| | |
Sbjct 156625 CTCAACACAAGATGAAGAGTGGATTCCTTTTGAATGTTGTAGTCAGACAATGTGT-GTCC 156567
Query 48571 GTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTT 48630
|| |||| ||||| || | | || | | ||||||||| || | | ||||||
Sbjct 156566 ATCTTCCAATTGCTTGCCAGCAAAGATCAGTCTCTGCTGATCAGGAGGAATTCCTTCCTT 156507
Query 48631 GTCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTAT 48690
| | ||| || ||| | | |||| ||||| | | || ||||| || ||
Sbjct 156506 ATTCTGAATCTTGGCCTTTACATTTTCTATTGTATCCGAGGTTTCAACCTCGAGAGTGAT 156447
Query 48691 GGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCATC 48727
||| || || || || |||||||| ||||||||||||
Sbjct 156446 GGTCTTCCCTGTAAGGGTTTTCACGAAAATCTGCATC 156410
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 421231213341893
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