Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Odobenus_20rosmarus_20divergens_20[refseq_20GCF_5F000321225.1_202013 -01-16] 3,893 sequences; 2,400,150,193 total letters Query= NC_006146.1 Length=171096 Score E Sequences producing significant alignments: (Bits) Value seq2231 134 2e-26 >seq2231 Length=228578 Score = 134 bits (148), Expect = 2e-26 Identities = 113/139 (81%), Gaps = 0/139 (0%) Strand=Plus/Plus Query 10140 AGGGCTACCTGGGATGTCAGGCCCTGTCTGAAATGATCCAGTTTTACCTGGAGGAAGTAA 10199 |||| |||||||| || || ||| |||| || ||||||||||| ||||| ||||| || | Sbjct 44928 AGGGTTACCTGGGTTGCCAAGCCTTGTCGGAGATGATCCAGTTCTACCTAGAGGAGGTGA 44987 Query 10200 TGCCACAGGCTGAAAATCAGGACCCCCACGCCAAAGAGCACGTGAACTCTCTGGGCGAGA 10259 |||| |||||||| || || ||||| || ||| |||||||||||||| ||||| || | Sbjct 44988 TGCCCCAGGCTGAGAACCACGACCCAGACATCAAGGAGCACGTGAACTCCCTGGGGGAAA 45047 Query 10260 ATCTAAAGACCCTAAGGCT 10278 | || |||||||| ||||| Sbjct 45048 AGCTGAAGACCCTCAGGCT 45066 Score = 91.5 bits (100), Expect = 2e-13 Identities = 71/85 (84%), Gaps = 0/85 (0%) Strand=Plus/Plus Query 10359 AGCTGCAGGAAAAAGGAGTCTACAAAGCCATGAGTGAATTTGACATTTTTATTAACTATA 10418 |||| || || | ||| |||||||||||||||||||| |||||||| || || ||||| | Sbjct 47248 AGCTCCAAGAGAGAGGTGTCTACAAAGCCATGAGTGAGTTTGACATCTTCATCAACTACA 47307 Query 10419 TAGAAGCATACATGACCATGAAAAT 10443 ||||| | |||||||| ||||| || Sbjct 47308 TAGAAACCTACATGACAATGAAGAT 47332 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547352563159680