Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Odobenus_20rosmarus_20divergens_20[refseq_20GCF_5F000321225.1_202013 -01-16] 3,893 sequences; 2,400,150,193 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq47 123 2e-23 seq1835 104 2e-17 seq314 100 3e-16 seq29 98.7 9e-16 seq85 95.1 1e-14 seq2141 93.3 4e-14 seq949 93.3 4e-14 seq1198 89.7 5e-13 seq2164 87.8 2e-12 seq1114 87.8 2e-12 seq174 87.8 2e-12 >seq47 Length=4803410 Score = 123 bits (136), Expect = 2e-23 Identities = 169/236 (72%), Gaps = 0/236 (0%) Strand=Plus/Plus Query 94774 TTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATA 94833 ||| || ||||| ||||| |||| |||| ||||| ||| || ||||| || | ||| || Sbjct 4289402 TTAGACACCTCCCCTCAAGCGCAGGACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTA 4289461 Query 94834 ATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATC 94893 || || ||| |||||||||||||| ||| ||||||| || || ||||| || Sbjct 4289462 GTCAGACAGGGTGCGCCCGTCCTCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTC 4289521 Query 94894 TGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTG 94953 || || || || || ||||| | || || |||||||| ||| |||||| | | Sbjct 4289522 AGGGGGGATGCCCTCCTTGTCCTGGATCTTCGCCTTGACATTCTCGATGGTGTCACTGGG 4289581 Query 94954 GTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATGC 95009 || || || | |||||||| || || || | || ||||| ||||||||||||| Sbjct 4289582 CTCCACCTCCAGAGTGATGGTCTTGCCGGTCAAGGTCTTCACGAAGATCTGCATGC 4289637 Score = 109 bits (120), Expect = 5e-19 Identities = 153/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 94793 CGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAA 94852 |||| |||| ||||| ||| || ||||| || | ||| || || || ||| Sbjct 4289877 CGCAGGACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCG 4289936 Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912 ||||||||||| || ||| ||||||| || || ||||| || || || || || |||||| Sbjct 4289937 TCCTCCAGCTGCTTCCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGGATGCCCTCTTTG 4289996 Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972 || | || || |||||||| ||| |||||| | | || || || | |||||| Sbjct 4289997 TCCTGGATCTTCGCCTTGACATTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATG 4290056 Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || || || || | || ||||||||||||||||| Sbjct 4290057 GTCTTACCGGTCAAGGTCTTCACAAAGATCTGCAT 4290091 Score = 107 bits (118), Expect = 2e-18 Identities = 161/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 || ||||| | |||| |||| ||||| ||| || ||||| || | ||| || || | Sbjct 4289637 CCCCCTCTGAGGCGCAGGACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAGAC 4289696 Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900 | ||| ||||||||||| || ||| ||||||| || || ||||| || || || Sbjct 4289697 AGGGTGCGCCCGTCCTCCAGCTGCTTCCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGG 4289756 Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960 || || || ||||| | || || |||||||| ||| |||||| | | || || Sbjct 4289757 ATGCCCTCCTTGTCCTGGATCTTCGCCTTGACATTCTCGATGGTGTCACTGGGCTCCACC 4289816 Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATGC 95009 || | |||||||| || || || | || ||||| ||||||||||||| Sbjct 4289817 TCCAGGGTGATGGTCTTGCCGGTCAAGGTCTTCACGAAGATCTGCATGC 4289865 >seq1835 Length=364085 Score = 104 bits (114), Expect = 2e-17 Identities = 165/237 (70%), Gaps = 0/237 (0%) Strand=Plus/Plus Query 94774 TTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATA 94833 ||| || ||||| ||||| ||| ||||||| || ||| || ||||| | | ||| || Sbjct 341213 TTAGACACCTCCCCTCAAGTGCAGGACCAAGTACAGAGTGGACTCCTTCTAGATGTTGTA 341272 Query 94834 ATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATC 94893 | || ||| ||| |||||||| | | | ||||||| || || ||||| || Sbjct 341273 GGCAGACAGGGTGCGCCCATCTGCCAGCTGTCTCCTGGCAAAGATCAACCTCTGCTGGTC 341332 Query 94894 TGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTG 94953 || || || || |||||||| | || || ||||||| ||| |||||| | | Sbjct 341333 AGGGGGGATGCCATCTTTGTCCTGGATCTTCACCTTGACATTCTCGATGGTGTCACTGGG 341392 Query 94954 GTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATGCT 95010 || || || | |||||||| || ||||| | || ||||| |||||||||||||| Sbjct 341393 CTCCACCTCCAGGGTGATGGTCTTACCAGTCAAGGTCTTCACGAAGATCTGCATGCT 341449 >seq314 Length=2398313 Score = 100 bits (110), Expect = 3e-16 Identities = 148/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTC 94857 ||||||||||| || || || || || | ||||| || || ||| | ||| || Sbjct 2323439 CACCAAGTGCAGGGTGGACTCTTTCTGGATATTATAGTCTGACAGAGTACGGCCATCTTC 2323498 Query 94858 CAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATA 94917 ||||||||| || |||| || | | ||||| || || || || || || ||||| | Sbjct 2323499 CAGCTGTTTGCCCGCAAAAATCAGACGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCTTG 2323558 Query 94918 AATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTT 94977 ||||| || ||||| | | ||||||| | | ||||| || | |||||||| || Sbjct 2323559 GATTTTGGCTTTGACATTCTCAATAGTGTCACTGGGCTCGACCTCGAGGGTGATGGTCTT 2323618 Query 94978 TCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || || || || ||||||||||||||||| Sbjct 2323619 GCCCGTCAGGGTCTTCACAAAGATCTGCAT 2323648 >seq29 Length=5782310 Score = 98.7 bits (108), Expect = 9e-16 Identities = 155/221 (70%), Gaps = 1/221 (0%) Strand=Plus/Minus Query 94792 TCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA 94851 || |||||| | || | ||| ||||||||||| | ||| || || || |||| Sbjct 156626 TCTCAACACAAGATGAAGAGTGGATTCCTTTTGAATGTTGTAGTCAGACAATGTGTGTCC 156567 Query 94852 ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTT 94911 ||| |||| || || || ||||||| | ||| |||||||| |||||||| ||||| || Sbjct 156566 ATCTTCCAATTGCTTGCCAGCAAAGATCAGTCTCTGCTGATCAGGAGGAATTCCTTCCTT 156507 Query 94912 GTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGAT 94971 | | ||| || ||||| || | | || || | | || || || | ||||| Sbjct 156506 ATTCTGAATCTTGGCCTTTACATTTTCTATTGTATCCGAGGTTTCAACCTCGAGAGTGAT 156447 Query 94972 GGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATGCTTA 95012 ||| || || ||||| |||||||| || |||||||| |||| Sbjct 156446 GGTCTTCCCTGTAAGGGTTTTCACGAAAATCTGCAT-CTTA 156407 >seq85 Length=4131313 Score = 95.1 bits (104), Expect = 1e-14 Identities = 147/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTC 94857 ||||||||||| || || || || || | ||||| || || ||| | ||| || Sbjct 1818201 CACCAAGTGCAGGGTGGACTCTTTCTGGATATTATAGTCTGACAGAGTACGGCCATCTTC 1818260 Query 94858 CAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATA 94917 ||||||||| || |||| || | | ||||| || || || || || || ||||| | Sbjct 1818261 CAGCTGTTTGCCCGCAAAAATCAGACGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCTTG 1818320 Query 94918 AATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTT 94977 ||||| || ||||| | | || |||| | | ||||| || | |||||||| || Sbjct 1818321 GATTTTGGCTTTGACATTCTCAATAGCGTCACTGGGCTCGACCTCGAGGGTGATGGTCTT 1818380 Query 94978 TCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || || || || ||||||||||||||||| Sbjct 1818381 GCCTGTCAGGGTCTTCACAAAGATCTGCAT 1818410 >seq2141 Length=56954 Score = 93.3 bits (102), Expect = 4e-14 Identities = 227/341 (67%), Gaps = 5/341 (1%) Strand=Plus/Plus Query 43606 CCGGATCTTCTTCCAGTTCAGGGTAAGATATCTTTTCACAAATGAGCTGGGCGATTCTGT 43665 || || |||| || | ||| || ||| | ||| ||||||||||||||| || || | | Sbjct 38664 CCTGAACTTCCTCTATTTCTGGATAAAAAATCCGTTCACAAATGAGCTGTGCAATCCGAT 38723 Query 43666 CTCCCTGCAGCACGTAAAAAGTGTGCTTATCGTGGTTGAATAGCACCACGCCCACGTTTC 43725 | |||| || | ||| | | || | || ||||| || || ||||| |||| Sbjct 38724 CGCCCTTTTTGACTTGAAACTTCTCTTTGCCAAAATTAAATAGTACGACACCCACATTTC 38783 Query 43726 CCCTATAGTCTTCGTCTATTACGCCCGCGCCTACGTCTATTCCGTGACGTACTGCCAAGC 43785 | || |||||||| ||||| ||||| || |||| || || ||| | | ||||||| Sbjct 38784 CTCTGTAGTCTTCATCTATGACGCCAGCTCCTATATCGATGAAGTGTTTTGCAGCCAAGC 38843 Query 43786 CTGATCTG---GCGGCCACCCTGCCATAATGTCCGTGAGGCACGGCTACCCGTATGTCCG 43842 | || | | || | || || ||||| || ||| | |||||| | ||||||| Sbjct 38844 CAGAACGGGGAGCTACTACTCTTCCATAGCACCCAGAAGGAAGAGCTACCTGAATGTCCG 38903 Query 43843 TTTTTACGA-GGCTGTAGCCTTTGGGTTCTATGGCCAAATCTTGGGCGCTGTACAGATCG 43901 |||| || | |||| | || | ||| || | |||| | ||| |||||||| ||| Sbjct 38904 TTTTCACAAGGGCTTTCTCC-ATAGGTGGTAGTGTATAATCATAGGCACTGTACAGGTCG 38962 Query 43902 TACCCGGCGGAGAGCTTGGATCCTTTGGTGGGCGTGGTAGC 43942 || || || | || ||| || ||||| || | ||| || Sbjct 38963 TAGCCTGCAGCCCGCGCGGACCCCTTGGTCGGGGCGGTGGC 39003 >seq949 Length=596474 Score = 93.3 bits (102), Expect = 4e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCC 94858 |||| ||| | ||| || || || || | ||| ||||| | |||| | ||| ||| Sbjct 262172 ACCAGGTGGAGAGTTGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTCC 262231 Query 94859 AGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAA 94918 ||||| || || ||||||| | || ||||| || || || || || ||||| || | Sbjct 262232 AGCTGCTTGCCAGCAAAGATAAGCCTCTGCTGGTCAGGGGGGATGCCCTCTTTATCTTGG 262291 Query 94919 ATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTT 94978 || || ||||| || ||| |||||| | | || || || | |||||||| || Sbjct 262292 ATCTTGGCCTTCACATTTTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTG 262351 Query 94979 CCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || || || || ||||||||||||||||| Sbjct 262352 CCGGTCAGGGTCTTCACAAAGATCTGCAT 262380 >seq1198 Length=804178 Score = 89.7 bits (98), Expect = 5e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 || || |||| |||| |||| ||||| || || || || || | ||||||||| Sbjct 573711 CCACCCCTCAGGCGCAGAACCAGGTGCAGGGTCGACTCTTTCTGGATGTTATAATCAGAA 573652 Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900 | ||||| | ||| |||||||| || || |||| || | || ||||| || || || Sbjct 573651 AGAGTGTGGCCATCTTCCAGCTGCTTGCCTGCAAAAATGAGCCTCTGCTGGTCAGGGGGG 573592 Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960 || || | ||| || | || || ||||| || ||| |||||| | | || || Sbjct 573591 ATGCCCTGTTTATCTTGGATCTTGGCCTTCACATTTTCGATGGTGTCACTGGGCTCTACC 573532 Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || | ||||||| || || || || || ||||| ||||||||||| Sbjct 573531 TCTAGGTTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 573485 Score = 89.7 bits (98), Expect = 5e-13 Identities = 157/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 || ||||||| || | |||| ||| | ||| || || || || | || ||||| Sbjct 573939 CCACCTCTCAGACGGAGAACCAGGTGGAGAGTTGACTCTTTCTGGATATTGTAATCAGAA 573880 Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900 | |||| | ||| |||||||| || || ||||||| | || ||||| || || || Sbjct 573879 AGAGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATAAGCCTCTGCTGGTCAGGGGGG 573820 Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960 || || ||||| || | || || ||||| ||| | |||||| | | || || Sbjct 573819 ATGCCCTCTTTATCTTGGATCTTCGCCTTCACGTTTTCAGTGGTGTCACTGGGCTCCACC 573760 Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATGC 95009 || | |||||||| || || || || || ||||| ||||||||||||| Sbjct 573759 TCCAGGGTGATGGTCTTGCCGGTTAGGGTCTTCACGAAGATCTGCATGC 573711 >seq2164 Length=79412 Score = 87.8 bits (96), Expect = 2e-12 Identities = 144/208 (69%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTC 94857 ||||||||||| || || || || || | |||| || || ||| | | || || Sbjct 52108 CACCAAGTGCAGGGTGGAGTCTTTCTGGATATTATCGTCTGACAGAGTATGGCCATTTTC 52049 Query 94858 CAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATA 94917 ||||||||| || |||| || | | ||||| || || || ||||| || ||||| | Sbjct 52048 CAGCTGTTTGCCCACAAAAATCAGACGCTGCTGGTCAGGCGGGATACCCTCCTTGTCTTG 51989 Query 94918 AATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTT 94977 ||||| || ||||| | ||||||| | | ||||| | | |||||||| || Sbjct 51988 GATTTTGGCTTTGACATTCTCAGTAGTGTCACTGGGCTCGACCTTGAGGGTGATGGTCTT 51929 Query 94978 TCCAGTAAGAGTTTTCACAAAGATCTGC 95005 || || || || ||||||||||||||| Sbjct 51928 GCCCGTCAGGGTCTTCACAAAGATCTGC 51901 >seq1114 Length=1661397 Score = 87.8 bits (96), Expect = 2e-12 Identities = 146/211 (69%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCC 94858 |||| ||| | ||| || || || || | ||| ||||| | |||| | ||| ||| Sbjct 1502920 ACCAGGTGGAGAGTTGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTCC 1502979 Query 94859 AGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAA 94918 ||||| || || ||||||| | ||| ||||| || || || || || ||||| || | Sbjct 1502980 AGCTGCTTGCCAGCAAAGATAAGTCTCTGCTGGTCAGGGGGGATGCCCTCTTTATCTTGG 1503039 Query 94919 ATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTT 94978 || || ||||| ||| | || ||| | | || || || | |||||||| || Sbjct 1503040 ATCTTCGCCTTCACGTTTTCAGTGGTATCACTGGGCTCCACCTCCAGGGTGATGGTCTTG 1503099 Query 94979 CCAGTAAGAGTTTTCACAAAGATCTGCATGC 95009 || || || || ||||| ||||||||||||| Sbjct 1503100 CCGGTCAGGGTCTTCACGAAGATCTGCATGC 1503130 >seq174 Length=4297676 Score = 87.8 bits (96), Expect = 2e-12 Identities = 149/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 94792 TCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA 94851 || |||||| | || | ||| || |||||||| | | | || || | || ||| | Sbjct 3533513 TCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGCTGTAGTCACACAAAGTTTGTCT 3533454 Query 94852 ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTT 94911 || ||||| || || || | ||||| | ||| |||||||| |||||||| ||||| || Sbjct 3533453 GTCTTCCAGTTGCTTGCCAGCGAAGATCAGTCTCTGCTGATCAGGAGGAATTCCTTCCTT 3533394 Query 94912 GTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGAT 94971 || | || || ||||| || | || || || | | || | || | ||||| Sbjct 3533393 ATCCTGGATCTTGGCCTTTACATTTTCTACTGTATCTGAGGATTCAATCTCGAGAGTGAT 3533334 Query 94972 GGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 ||| || || |||| ||||||||||| |||||||| Sbjct 3533333 GGTCTTCCCCATAAGGGTTTTCACAAAAATCTGCAT 3533298 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448269385029480