Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Odobenus_20rosmarus_20divergens_20[refseq_20GCF_5F000321225.1_202013
-01-16] 3,893 sequences; 2,400,150,193 total letters
Query= NC_007767.1
Length=132959
Score E
Sequences producing significant alignments: (Bits) Value
seq530 95.1 1e-14
seq314 95.1 1e-14
seq33 95.1 1e-14
seq29 89.7 4e-13
seq85 86.0 5e-12
seq1198 82.4 6e-11
>seq530
Length=2118653
Score = 95.1 bits (104), Expect = 1e-14
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345
||||| ||||| || ||||| || ||||| || ||||| || |||| || ||
Sbjct 64012 ATGCAGATTTTCGTGAAAACCCTTACGGGGAAGACCATCACTCTCGAGGTTGAACCCTCG 63953
Query 115346 GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAG 115405
|| || | | | | ||||| || ||| ||||| ||||| | | |||||||
Sbjct 63952 GATACAATAGAAAATGTAAAGGCCAAGATTCAGGATAAGGAAGGAATTTCTCCTGATCAG 63893
Query 115406 CAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAAC 115465
|| ||||| || | ||| ||||| ||| | ||||||| || || | || || |||
Sbjct 63892 CAGAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGCACTTTGTCTGACTACAAC 63833
Query 115466 ATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512
|||||||| ||||| ||| | ||| | ||||||||| | || |||||
Sbjct 63832 ATTCAAAAGGAGTCCACTCTTCATCTTGTGTTGAGACTTCGTGGAGG 63786
>seq314
Length=2398313
Score = 95.1 bits (104), Expect = 1e-14
Identities = 147/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345
||||| || ||||| || || || ||||| || ||||| ||| |||| ||| ||||
Sbjct 2323648 ATGCAGATCTTTGTGAAGACCCTGACGGGCAAGACCATCACCCTCGAGGTCGAGCCCAGT 2323589
Query 115346 GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAG 115405
|||||| ||| | || ||| ||||| || || || ||| |||| ||| |||
Sbjct 2323588 GACACTATTGAGAATGTCAAAGCCAAAATCCAAGACAAGGAGGGCATCCCGCCTGACCAG 2323529
Query 115406 CAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAAC 115465
|| | || |||| |||||||||||| | ||||||| | || || | || |||||
Sbjct 2323528 CAGCGTCTGATTTTTGCGGGCAAACAGCTGGAAGATGGCCGTACTCTGTCAGACTATAAT 2323469
Query 115466 ATTCAAAAAGAGTCTACTATACATATGGTG 115495
|| || |||||||| || | || |||||
Sbjct 2323468 ATCCAGAAAGAGTCCACCCTGCACTTGGTG 2323439
>seq33
Length=6086033
Score = 95.1 bits (104), Expect = 1e-14
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345
||||| ||||| || ||||| || ||||| || ||||| || |||| || ||
Sbjct 2214995 ATGCAGATTTTCGTGAAAACCCTTACGGGGAAGACCATCACTCTCGAGGTTGAACCCTCG 2214936
Query 115346 GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAG 115405
| || | | | | ||||| ||| ||| ||||| ||||| | || |||||||
Sbjct 2214935 GGTACAATGGAAAATGTAAAGGCAAAGATTCAGGATAAGGAAGGAATTCCTCCTGATCAG 2214876
Query 115406 CAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAAC 115465
|| ||||| || | ||| ||||| ||| | ||||||| || || | || || |||
Sbjct 2214875 CAGAGACTGATATTTGCTGGCAAGCAACTGGAAGATGGACGCACTTTGTCTGACTACAAC 2214816
Query 115466 ATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512
|||||||| ||||| ||| | ||| | ||||||||| | || || ||
Sbjct 2214815 ATTCAAAAGGAGTCCACTCTTCATCTTGTGTTGAGACTTCGTGGTGG 2214769
>seq29
Length=5782310
Score = 89.7 bits (98), Expect = 4e-13
Identities = 151/219 (69%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 115283 AAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCC 115342
|| ||||| ||||| || ||||| || || || || ||||| || |||| || ||
Sbjct 156408 AAGATGCAGATTTTCGTGAAAACCCTTACAGGGAAGACCATCACTCTCGAGGTTGAAACC 156467
Query 115343 AGCGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGAT 115402
|| || | | | | ||||| || ||| |||| ||||| | || ||||
Sbjct 156468 TCGGATACAATAGAAAATGTAAAGGCCAAGATTCAGAATAAGGAAGGAATTCCTCCTGAT 156527
Query 115403 CAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTAT 115462
||||| ||||| || | ||| ||||| ||||| ||||||| | || || | || ||
Sbjct 156528 CAGCAGAGACTGATCTTTGCTGGCAAGCAATTGGAAGATGGACACACATTGTCTGACTAC 156587
Query 115463 AACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGA 115501
||||||||||| || || ||| | ||| | |||||||||
Sbjct 156588 AACATTCAAAAGGAATCCACTCTTCATCTTGTGTTGAGA 156626
>seq85
Length=4131313
Score = 86.0 bits (94), Expect = 5e-12
Identities = 145/210 (69%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345
||||| || ||||| || || || || || || ||||| ||| |||| ||| ||||
Sbjct 1818410 ATGCAGATCTTTGTGAAGACCCTGACAGGCAAGACCATCACCCTCGAGGTCGAGCCCAGT 1818351
Query 115346 GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAG 115405
||| || ||| | || ||| ||||| || || || ||| |||| ||| |||
Sbjct 1818350 GACGCTATTGAGAATGTCAAAGCCAAAATCCAAGACAAGGAGGGCATCCCGCCTGACCAG 1818291
Query 115406 CAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAAC 115465
|| | || |||| |||||||||||| | ||||||| | || || | || |||||
Sbjct 1818290 CAGCGTCTGATTTTTGCGGGCAAACAGCTGGAAGATGGCCGTACTCTGTCAGACTATAAT 1818231
Query 115466 ATTCAAAAAGAGTCTACTATACATATGGTG 115495
|| || |||||||| || | || |||||
Sbjct 1818230 ATCCAGAAAGAGTCCACCCTGCACTTGGTG 1818201
>seq1198
Length=804178
Score = 82.4 bits (90), Expect = 6e-11
Identities = 138/200 (69%), Gaps = 0/200 (0%)
Strand=Plus/Plus
Query 115283 AAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCC 115342
|||||||| || || || || || || || || || ||||| | | | || ||| ||
Sbjct 573482 AAAATGCAGATCTTCGTGAAGACCCTGACCGGCAAGACCATCAACCTAGAGGTAGAGCCC 573541
Query 115343 AGCGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGAT 115402
|| ||||| | | | | || || || || |||||| | ||| ||||| |||
Sbjct 573542 AGTGACACCATCGAAAATGTGAAGGCCAAGATCCAAGATAAACAGGGCATCCCCCCTGAC 573601
Query 115403 CAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTAT 115462
||||| || || |||| ||| ||||| || | ||||||| | | || | | ||||||
Sbjct 573602 CAGCAGAGGCTCATTTTTGCAGGCAAGCAGCTGGAAGATGGCCACACTCTTTCTGATTAT 573661
Query 115463 AACATTCAAAAAGAGTCTAC 115482
||||| || |||||||| ||
Sbjct 573662 AACATCCAGAAAGAGTCGAC 573681
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 425323819155160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |