Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Odobenus_20rosmarus_20divergens_20[refseq_20GCF_5F000321225.1_202013 -01-16] 3,893 sequences; 2,400,150,193 total letters Query= NC_007767.1 Length=132959 Score E Sequences producing significant alignments: (Bits) Value seq530 95.1 1e-14 seq314 95.1 1e-14 seq33 95.1 1e-14 seq29 89.7 4e-13 seq85 86.0 5e-12 seq1198 82.4 6e-11 >seq530 Length=2118653 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 ||||| ||||| || ||||| || ||||| || ||||| || |||| || || Sbjct 64012 ATGCAGATTTTCGTGAAAACCCTTACGGGGAAGACCATCACTCTCGAGGTTGAACCCTCG 63953 Query 115346 GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAG 115405 || || | | | | ||||| || ||| ||||| ||||| | | ||||||| Sbjct 63952 GATACAATAGAAAATGTAAAGGCCAAGATTCAGGATAAGGAAGGAATTTCTCCTGATCAG 63893 Query 115406 CAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAAC 115465 || ||||| || | ||| ||||| ||| | ||||||| || || | || || ||| Sbjct 63892 CAGAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGCACTTTGTCTGACTACAAC 63833 Query 115466 ATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 |||||||| ||||| ||| | ||| | ||||||||| | || ||||| Sbjct 63832 ATTCAAAAGGAGTCCACTCTTCATCTTGTGTTGAGACTTCGTGGAGG 63786 >seq314 Length=2398313 Score = 95.1 bits (104), Expect = 1e-14 Identities = 147/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 ||||| || ||||| || || || ||||| || ||||| ||| |||| ||| |||| Sbjct 2323648 ATGCAGATCTTTGTGAAGACCCTGACGGGCAAGACCATCACCCTCGAGGTCGAGCCCAGT 2323589 Query 115346 GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAG 115405 |||||| ||| | || ||| ||||| || || || ||| |||| ||| ||| Sbjct 2323588 GACACTATTGAGAATGTCAAAGCCAAAATCCAAGACAAGGAGGGCATCCCGCCTGACCAG 2323529 Query 115406 CAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAAC 115465 || | || |||| |||||||||||| | ||||||| | || || | || ||||| Sbjct 2323528 CAGCGTCTGATTTTTGCGGGCAAACAGCTGGAAGATGGCCGTACTCTGTCAGACTATAAT 2323469 Query 115466 ATTCAAAAAGAGTCTACTATACATATGGTG 115495 || || |||||||| || | || ||||| Sbjct 2323468 ATCCAGAAAGAGTCCACCCTGCACTTGGTG 2323439 >seq33 Length=6086033 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 ||||| ||||| || ||||| || ||||| || ||||| || |||| || || Sbjct 2214995 ATGCAGATTTTCGTGAAAACCCTTACGGGGAAGACCATCACTCTCGAGGTTGAACCCTCG 2214936 Query 115346 GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAG 115405 | || | | | | ||||| ||| ||| ||||| ||||| | || ||||||| Sbjct 2214935 GGTACAATGGAAAATGTAAAGGCAAAGATTCAGGATAAGGAAGGAATTCCTCCTGATCAG 2214876 Query 115406 CAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAAC 115465 || ||||| || | ||| ||||| ||| | ||||||| || || | || || ||| Sbjct 2214875 CAGAGACTGATATTTGCTGGCAAGCAACTGGAAGATGGACGCACTTTGTCTGACTACAAC 2214816 Query 115466 ATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 |||||||| ||||| ||| | ||| | ||||||||| | || || || Sbjct 2214815 ATTCAAAAGGAGTCCACTCTTCATCTTGTGTTGAGACTTCGTGGTGG 2214769 >seq29 Length=5782310 Score = 89.7 bits (98), Expect = 4e-13 Identities = 151/219 (69%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 115283 AAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCC 115342 || ||||| ||||| || ||||| || || || || ||||| || |||| || || Sbjct 156408 AAGATGCAGATTTTCGTGAAAACCCTTACAGGGAAGACCATCACTCTCGAGGTTGAAACC 156467 Query 115343 AGCGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGAT 115402 || || | | | | ||||| || ||| |||| ||||| | || |||| Sbjct 156468 TCGGATACAATAGAAAATGTAAAGGCCAAGATTCAGAATAAGGAAGGAATTCCTCCTGAT 156527 Query 115403 CAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTAT 115462 ||||| ||||| || | ||| ||||| ||||| ||||||| | || || | || || Sbjct 156528 CAGCAGAGACTGATCTTTGCTGGCAAGCAATTGGAAGATGGACACACATTGTCTGACTAC 156587 Query 115463 AACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGA 115501 ||||||||||| || || ||| | ||| | ||||||||| Sbjct 156588 AACATTCAAAAGGAATCCACTCTTCATCTTGTGTTGAGA 156626 >seq85 Length=4131313 Score = 86.0 bits (94), Expect = 5e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 ||||| || ||||| || || || || || || ||||| ||| |||| ||| |||| Sbjct 1818410 ATGCAGATCTTTGTGAAGACCCTGACAGGCAAGACCATCACCCTCGAGGTCGAGCCCAGT 1818351 Query 115346 GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAG 115405 ||| || ||| | || ||| ||||| || || || ||| |||| ||| ||| Sbjct 1818350 GACGCTATTGAGAATGTCAAAGCCAAAATCCAAGACAAGGAGGGCATCCCGCCTGACCAG 1818291 Query 115406 CAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAAC 115465 || | || |||| |||||||||||| | ||||||| | || || | || ||||| Sbjct 1818290 CAGCGTCTGATTTTTGCGGGCAAACAGCTGGAAGATGGCCGTACTCTGTCAGACTATAAT 1818231 Query 115466 ATTCAAAAAGAGTCTACTATACATATGGTG 115495 || || |||||||| || | || ||||| Sbjct 1818230 ATCCAGAAAGAGTCCACCCTGCACTTGGTG 1818201 >seq1198 Length=804178 Score = 82.4 bits (90), Expect = 6e-11 Identities = 138/200 (69%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 115283 AAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCC 115342 |||||||| || || || || || || || || || ||||| | | | || ||| || Sbjct 573482 AAAATGCAGATCTTCGTGAAGACCCTGACCGGCAAGACCATCAACCTAGAGGTAGAGCCC 573541 Query 115343 AGCGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGAT 115402 || ||||| | | | | || || || || |||||| | ||| ||||| ||| Sbjct 573542 AGTGACACCATCGAAAATGTGAAGGCCAAGATCCAAGATAAACAGGGCATCCCCCCTGAC 573601 Query 115403 CAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTAT 115462 ||||| || || |||| ||| ||||| || | ||||||| | | || | | |||||| Sbjct 573602 CAGCAGAGGCTCATTTTTGCAGGCAAGCAGCTGGAAGATGGCCACACTCTTTCTGATTAT 573661 Query 115463 AACATTCAAAAAGAGTCTAC 115482 ||||| || |||||||| || Sbjct 573662 AACATCCAGAAAGAGTCGAC 573681 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425323819155160