Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Odobenus_20rosmarus_20divergens_20[refseq_20GCF_5F000321225.1_202013 -01-16] 3,893 sequences; 2,400,150,193 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq174 100 3e-16 seq314 96.9 3e-15 seq33 93.3 4e-14 seq1198 91.5 1e-13 seq395 89.7 5e-13 seq1114 87.8 2e-12 seq530 87.8 2e-12 seq85 87.8 2e-12 seq59 84.2 2e-11 >seq174 Length=4297676 Score = 100 bits (110), Expect = 3e-16 Identities = 150/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 131022 CAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTC 131081 || ||| | ||| | || ||||||||||||||| |||| || | || || | ||| Sbjct 3533510 CAACACAAGATGAAGAGTGGACTCCTTTTGAATGCTGTAGTCACACAAAGTTTGTCTGTC 3533451 Query 131082 CTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTC 131141 || || |||||||| ||| |||| | | |||||| || ||||| |||||||| || || Sbjct 3533450 TTCCAGTTGCTTGCCAGCGAAGATCAGTCTCTGCTGATCAGGAGGAATTCCTTCCTTATC 3533391 Query 131142 GGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGT 131201 ||| || ||| | | || || ||||| | ||| || || |||| || | ||| Sbjct 3533390 CTGGATCTTGGCCTTTACATTTTCTACTGTATCTGAGGATTCAATCTCGAGAGTGATGGT 3533331 Query 131202 TTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || || | || ||||| || ||||||||||| Sbjct 3533330 CTTCCCCATAAGGGTTTTCACAAAAATCTGCAT 3533298 >seq314 Length=2398313 Score = 96.9 bits (106), Expect = 3e-15 Identities = 162/233 (70%), Gaps = 1/233 (0%) Strand=Plus/Plus Query 131003 ATGA-GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAA 131061 |||| |||||| || | || ||||| || || | ||| ||||| || || || || || Sbjct 2323416 ATGATGCCACCCCGGAGGCGAAGCACCAAGTGCAGGGTGGACTCTTTCTGGATATTATAG 2323475 Query 131062 TCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCC 131121 || || || || || || ||||| ||||| || | || | |||||||||||| Sbjct 2323476 TCTGACAGAGTACGGCCATCTTCCAGCTGTTTGCCCGCAAAAATCAGACGCTGCTGGTCA 2323535 Query 131122 GGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGAC 131181 || ||||| || || ||||| |||||| |||| | ||| | ||| || ||| | Sbjct 2323536 GGCGGGATGCCCTCCTTGTCTTGGATTTTGGCTTTGACATTCTCAATAGTGTCACTGGGC 2323595 Query 131182 TCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| |||| ||| | ||| || || || || || || || || |||||||| Sbjct 2323596 TCGACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACAAAGATCTGCAT 2323648 >seq33 Length=6086033 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | | || ||| | ||| | || |||||||||||||||||||| || | Sbjct 2214769 CCACCACGAAGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGAC 2214828 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| || || || |||||||| || | || | | |||||| || ||||| Sbjct 2214829 AAAGTGCGTCCATCTTCCAGTTGCTTGCCAGCAAATATCAGTCTCTGCTGATCAGGAGGA 2214888 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTG-CTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 |||||||| || || ||| | | || ||| | | |||| ||| | | || || | Sbjct 2214889 ATTCCTTCCTTATC-CTGAATCTTTGCCTTTACATTTTCCATTGTACCCGAGGGTTCAAC 2214947 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| || | ||| || || || || ||||| |||||||||||||| Sbjct 2214948 CTCGAGAGTGATGGTCTTCCCCGTAAGGGTTTTCACGAAAATCTGCAT 2214995 >seq1198 Length=804178 Score = 91.5 bits (100), Expect = 1e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 131006 AGCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGC 131065 ||||||| | || ||| || || | || | || ||||| || || || |||||||| Sbjct 573941 AGCCACCTCTCAGACGGAGAACCAGGTGGAGAGTTGACTCTTTCTGGATATTGTAATCAG 573882 Query 131066 TCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAG 131125 | ||||| || || ||||||||||| || |||| | | ||||||||| || | Sbjct 573881 AAAGAGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATAAGCCTCTGCTGGTCAGGGG 573822 Query 131126 GGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGA 131185 |||| || ||||| || ||| ||| ||| | | || || || ||| ||| | Sbjct 573821 GGATGCCCTCTTTATCTTGGATCTTCGCCTTCACGTTTTCAGTGGTGTCACTGGGCTCCA 573762 Query 131186 TGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 || | ||| | ||| || |||||||| || || ||||| ||||||||| Sbjct 573761 CCTCCAGGGTGATGGTCTTGCCGGTTAGGGTCTTCACGAAGATCTGCATG 573712 >seq395 Length=2662522 Score = 89.7 bits (98), Expect = 5e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | | || ||| | ||| | || |||||||||||||||||||| || | Sbjct 955164 CCACCACGAAGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGAC 955223 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| || || || |||||||| | |||| | | |||||| || ||||| Sbjct 955224 AAAGTGCGTCCATCTTCCAGTTGCTTGCCAGGCAAGATCAGTCTCTGCTGATCAGGAGGA 955283 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 ||||||||||| | || || ||| | | || | ||||| | | || | Sbjct 955284 ATTCCTTCTTTATTATGAATCTTGGCCTTTACATTTTCTATTGTATCCGAAGGTTCAACC 955343 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| |||| ||| || || || || ||||| |||||||||||||| Sbjct 955344 TCGAGAGTAATGGTCTTCCCCGTAAGGGTTTTCACGAAAATCTGCAT 955390 >seq1114 Length=1661397 Score = 87.8 bits (96), Expect = 2e-12 Identities = 138/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 131038 GTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCT 131097 || ||||| || || ||||||||||| | ||||| || || ||||||||||| Sbjct 1502932 GTTGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCA 1502991 Query 131098 GCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTG 131157 || |||| | | ||||||||| || ||||| || ||||| || ||| ||| ||| Sbjct 1502992 GCAAAGATAAGTCTCTGCTGGTCAGGGGGGATGCCCTCTTTATCTTGGATCTTCGCCTTC 1503051 Query 131158 AGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTT 131217 | | || ||||| ||| ||| | || | ||| | ||| || ||||| || || Sbjct 1503052 ACGTTTTCAGTGGTATCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTCAGGGTC 1503111 Query 131218 TTTACGAAAATCTGCATG 131235 || ||||| ||||||||| Sbjct 1503112 TTCACGAAGATCTGCATG 1503129 >seq530 Length=2118653 Score = 87.8 bits (96), Expect = 2e-12 Identities = 147/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 131022 CAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTC 131081 || ||| | ||| | || |||||||||||||||||||| || || ||||| || Sbjct 63800 CAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTGCGTCCATC 63859 Query 131082 CTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTC 131141 || || |||||||| || |||| | | |||||| || |||| |||||||| || || Sbjct 63860 TTCCAGTTGCTTGCCAGCAAAGATCAGTCTCTGCTGATCAGGAGAAATTCCTTCCTTATC 63919 Query 131142 GGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGT 131201 || || ||| | | || | ||||| | || || | |||| || | ||| Sbjct 63920 CTGAATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGTTCAACCTCGAGAGTGATGGT 63979 Query 131202 TTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || || || || ||||| |||||||||||||| Sbjct 63980 CTTCCCCGTAAGGGTTTTCACGAAAATCTGCAT 64012 >seq85 Length=4131313 Score = 87.8 bits (96), Expect = 2e-12 Identities = 160/233 (69%), Gaps = 1/233 (0%) Strand=Plus/Plus Query 131003 ATGA-GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAA 131061 |||| |||||| | | || ||||| || || | ||| ||||| || || || || || Sbjct 1818178 ATGATGCCACCCCAGAGGCGAAGCACCAAGTGCAGGGTGGACTCTTTCTGGATATTATAG 1818237 Query 131062 TCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCC 131121 || || || || || || ||||| ||||| || | || | |||||||||||| Sbjct 1818238 TCTGACAGAGTACGGCCATCTTCCAGCTGTTTGCCCGCAAAAATCAGACGCTGCTGGTCA 1818297 Query 131122 GGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGAC 131181 || ||||| || || ||||| |||||| |||| | ||| | || || ||| | Sbjct 1818298 GGCGGGATGCCCTCCTTGTCTTGGATTTTGGCTTTGACATTCTCAATAGCGTCACTGGGC 1818357 Query 131182 TCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| |||| ||| | ||| || || || || || || || || |||||||| Sbjct 1818358 TCGACCTCGAGGGTGATGGTCTTGCCTGTCAGGGTCTTCACAAAGATCTGCAT 1818410 >seq59 Length=2579055 Score = 84.2 bits (92), Expect = 2e-11 Identities = 154/226 (68%), Gaps = 0/226 (0%) Strand=Plus/Plus Query 131009 CACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCA 131068 |||| || | | || ||| | ||| | || |||||||||||||||||||| || || Sbjct 1130453 CACCACGAAGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACA 1130512 Query 131069 TGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGA 131128 ||||| || || || |||||||| || |||| | | |||||| || ||||| | Sbjct 1130513 AAGTGCGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTCTGCTGATCAGGAGGAA 1130572 Query 131129 TTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATGT 131188 ||||||| || || || || ||| | | || | ||||| | | || | Sbjct 1130573 TTCCTTCCTTATCCTGAATCTTGGCCTTTACATTTTCTATTGTATCCGAGCGTTCAACCG 1130632 Query 131189 CGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 ||| || | ||| || || || || ||||| |||||||||||||| Sbjct 1130633 CGAGAGTGATGGTCTTCCCCGTAAGGGTTTTCACGAAAATCTGCAT 1130678 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 471989830677120