Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Odobenus_20rosmarus_20divergens_20[refseq_20GCF_5F000321225.1_202013
-01-16] 3,893 sequences; 2,400,150,193 total letters
Query= NC_008168.1
Length=104710
Score E
Sequences producing significant alignments: (Bits) Value
seq33 118 7e-22
seq59 114 9e-21
seq395 111 1e-19
seq530 109 4e-19
seq476 105 4e-18
seq29 102 5e-17
seq134 91.5 1e-13
seq75 91.5 1e-13
seq174 87.8 1e-12
>seq33
Length=6086033
Score = 118 bits (130), Expect = 7e-22
Identities = 154/213 (72%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 38105 CAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTC 38164
|||||| | |||||||||| |||||||||||| ||||| ||||||||| ||| | ||
Sbjct 2214783 CAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTGCGTCCATC 2214842
Query 38165 GTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTC 38224
|| | ||| || || |||||||| || | || ||||| | || | ||||| || ||
Sbjct 2214843 TTCCAGTTGCTTGCCAGCAAATATCAGTCTCTGCTGATCAGGAGGAATTCCTTCCTTATC 2214902
Query 38225 CATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGT 38284
| ||| ||| ||| ||||| | | ||| | |||||| || | || || ||
Sbjct 2214903 CTGAATCTTTGCCTTTACATTTTCCATTGTACCCGAGGGTTCAACCTCGAGAGTGATGGT 2214962
Query 38285 TTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317
|| ||||| | |||||||||||| ||||||||
Sbjct 2214963 CTTCCCCGTAAGGGTTTTCACGAAAATCTGCAT 2214995
>seq59
Length=2579055
Score = 114 bits (126), Expect = 9e-21
Identities = 153/213 (72%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 38105 CAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTC 38164
|||||| | |||||||||| |||||||||||| ||||| ||||||||| ||| | ||
Sbjct 1130466 CAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTGCGTCCATC 1130525
Query 38165 GTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTC 38224
|| | ||| || || ||||| || || | || ||||| | || | ||||| || ||
Sbjct 1130526 TTCCAGTTGCTTGCCAGCAAAGATCAGTCTCTGCTGATCAGGAGGAATTCCTTCCTTATC 1130585
Query 38225 CATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGT 38284
| ||| || ||| ||||| | | ||||| | |||||| | | || || ||
Sbjct 1130586 CTGAATCTTGGCCTTTACATTTTCTATTGTATCCGAGCGTTCAACCGCGAGAGTGATGGT 1130645
Query 38285 TTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317
|| ||||| | |||||||||||| ||||||||
Sbjct 1130646 CTTCCCCGTAAGGGTTTTCACGAAAATCTGCAT 1130678
>seq395
Length=2662522
Score = 111 bits (122), Expect = 1e-19
Identities = 154/216 (71%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 38105 CAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTC 38164
|||||| | |||||||||| |||||||||||| ||||| ||||||||| ||| | ||
Sbjct 955178 CAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTGCGTCCATC 955237
Query 38165 GTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTC 38224
|| | ||| || || | || || || | || ||||| | || | |||||||| |
Sbjct 955238 TTCCAGTTGCTTGCCAGGCAAGATCAGTCTCTGCTGATCAGGAGGAATTCCTTCTTTATT 955297
Query 38225 CATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGT 38284
||| || ||| ||||| | | ||||| | |||||| || | ||||| ||
Sbjct 955298 ATGAATCTTGGCCTTTACATTTTCTATTGTATCCGAAGGTTCAACCTCGAGAGTAATGGT 955357
Query 38285 TTTACCCGTCAAGGTTTTCACGAATATCTGCATGTT 38320
|| ||||| | |||||||||||| |||||||| ||
Sbjct 955358 CTTCCCCGTAAGGGTTTTCACGAAAATCTGCATCTT 955393
>seq530
Length=2118653
Score = 109 bits (120), Expect = 4e-19
Identities = 152/213 (71%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 38105 CAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTC 38164
|||||| | |||||||||| |||||||||||| ||||| ||||||||| ||| | ||
Sbjct 63800 CAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTGCGTCCATC 63859
Query 38165 GTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTC 38224
|| | ||| || || ||||| || || | || ||||| | | | ||||| || ||
Sbjct 63860 TTCCAGTTGCTTGCCAGCAAAGATCAGTCTCTGCTGATCAGGAGAAATTCCTTCCTTATC 63919
Query 38225 CATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGT 38284
| ||| || ||| ||||| | | ||||| |||||| || | || || ||
Sbjct 63920 CTGAATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGTTCAACCTCGAGAGTGATGGT 63979
Query 38285 TTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317
|| ||||| | |||||||||||| ||||||||
Sbjct 63980 CTTCCCCGTAAGGGTTTTCACGAAAATCTGCAT 64012
>seq476
Length=3007960
Score = 105 bits (116), Expect = 4e-18
Identities = 153/216 (71%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 38105 CAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTC 38164
|||||| | |||||||||| |||||||||||| ||||| | |||||| |||||| ||
Sbjct 1868602 CAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGGCGGACAAAGTACGTTCATC 1868661
Query 38165 GTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTC 38224
| | ||| || |||||||| || || | |||||||| || | |||| || ||
Sbjct 1868662 TCCCAGTTGCTTGCCGGCAAAGATCAGTCCCTGTTGATCATGAGGAATTTCTTCCTTATC 1868721
Query 38225 CATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGT 38284
| ||| || ||| ||||| | | ||| | |||||| || | || |||||
Sbjct 1868722 CTGAATCTTGACCTTTACATTTTCTATTGTAGCCGAGGGTTCAACCTCAAGAGTGATAGT 1868781
Query 38285 TTTACCCGTCAAGGTTTTCACGAATATCTGCATGTT 38320
|| || || | |||||||||||| |||||||| ||
Sbjct 1868782 CTTCCCAGTAAGGGTTTTCACGAAAATCTGCATCTT 1868817
>seq29
Length=5782310
Score = 102 bits (112), Expect = 5e-17
Identities = 152/216 (70%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 38105 CAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTC 38164
|||||| | |||||||||| ||||||||||| ||||| |||||||| || | ||
Sbjct 156623 CAACACAAGATGAAGAGTGGATTCCTTTTGAATGTTGTAGTCAGACAATGTGTGTCCATC 156564
Query 38165 GTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTC 38224
|| ||||| || || ||||| || || | || ||||| | || | ||||| || |
Sbjct 156563 TTCCAATTGCTTGCCAGCAAAGATCAGTCTCTGCTGATCAGGAGGAATTCCTTCCTTATT 156504
Query 38225 CATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGT 38284
| ||| || ||| ||||| | | ||||| ||||||| || | || || ||
Sbjct 156503 CTGAATCTTGGCCTTTACATTTTCTATTGTATCCGAGGTTTCAACCTCGAGAGTGATGGT 156444
Query 38285 TTTACCCGTCAAGGTTTTCACGAATATCTGCATGTT 38320
|| || || | |||||||||||| |||||||| ||
Sbjct 156443 CTTCCCTGTAAGGGTTTTCACGAAAATCTGCATCTT 156408
>seq134
Length=5086271
Score = 91.5 bits (100), Expect = 1e-13
Identities = 77/95 (81%), Gaps = 5/95 (5%)
Strand=Plus/Plus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956
|| ||| ||||||||||||| ||||| || |||||||| ||||| || ||||| ||
Sbjct 1337435 AAACCCATTCCCTTGGCTGTTGTTTCACTGGATAGTAGGTAGGGATGGTGGGAATCTTGT 1337494
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
| |||| ||||| | |||||||||||||||||||
Sbjct 1337495 TCATCCATTCATACATGTCACTAATTAGATGACGA 1337529
>seq75
Length=4930459
Score = 91.5 bits (100), Expect = 1e-13
Identities = 149/215 (69%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 38106 AACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTCG 38165
||||| | |||||||||| |||||||||||| ||||| ||||||||| ||| | ||
Sbjct 2283666 AACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTGCGTCCATCT 2283725
Query 38166 TCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCC 38225
| | ||| || || ||||| || | | || |||| | || | ||||| || |||
Sbjct 2283726 CCCAGTTGCTTGCCAGCAAAGATCAACCTCTGCTGATGAGGAGGAATTCCTTCCTTATCC 2283785
Query 38226 ATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGTT 38285
||| || ||| ||||| | | ||||| |||| | | | || || ||
Sbjct 2283786 TGAATCTTGGCCTTTACATTTTCTAGTGTATCCGAGGGTTCAGCCTTGAGAGTGATGGTC 2283845
Query 38286 TTACCCGTCAAGGTTTTCACGAATATCTGCATGTT 38320
|| ||||| | |||||||||||| |||||||| ||
Sbjct 2283846 TTCCCCGTAAGGGTTTTCACGAAAATCTGCATCTT 2283880
>seq174
Length=4297676
Score = 87.8 bits (96), Expect = 1e-12
Identities = 149/216 (69%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 38105 CAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTC 38164
|||||| | |||||||||| |||||||||||| |||| ||| ||||| || |||
Sbjct 3533510 CAACACAAGATGAAGAGTGGACTCCTTTTGAATGCTGTAGTCACACAAAGTTTGTCTGTC 3533451
Query 38165 GTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTC 38224
|| | ||| || || || || || || | || ||||| | || | ||||| || ||
Sbjct 3533450 TTCCAGTTGCTTGCCAGCGAAGATCAGTCTCTGCTGATCAGGAGGAATTCCTTCCTTATC 3533391
Query 38225 CATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGT 38284
| || || ||| ||||| | || |||||| ||||| || | || || ||
Sbjct 3533390 CTGGATCTTGGCCTTTACATTTTCTACTGTATCTGAGGATTCAATCTCGAGAGTGATGGT 3533331
Query 38285 TTTACCCGTCAAGGTTTTCACGAATATCTGCATGTT 38320
|| ||| | | ||||||||| || |||||||| ||
Sbjct 3533330 CTTCCCCATAAGGGTTTTCACAAAAATCTGCATCTT 3533295
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 334931308116083
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |