Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Odobenus_20rosmarus_20divergens_20[refseq_20GCF_5F000321225.1_202013 -01-16] 3,893 sequences; 2,400,150,193 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq33 118 7e-22 seq59 114 9e-21 seq395 111 1e-19 seq530 109 4e-19 seq476 105 4e-18 seq29 102 5e-17 seq134 91.5 1e-13 seq75 91.5 1e-13 seq174 87.8 1e-12 >seq33 Length=6086033 Score = 118 bits (130), Expect = 7e-22 Identities = 154/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 38105 CAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTC 38164 |||||| | |||||||||| |||||||||||| ||||| ||||||||| ||| | || Sbjct 2214783 CAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTGCGTCCATC 2214842 Query 38165 GTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTC 38224 || | ||| || || |||||||| || | || ||||| | || | ||||| || || Sbjct 2214843 TTCCAGTTGCTTGCCAGCAAATATCAGTCTCTGCTGATCAGGAGGAATTCCTTCCTTATC 2214902 Query 38225 CATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGT 38284 | ||| ||| ||| ||||| | | ||| | |||||| || | || || || Sbjct 2214903 CTGAATCTTTGCCTTTACATTTTCCATTGTACCCGAGGGTTCAACCTCGAGAGTGATGGT 2214962 Query 38285 TTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 || ||||| | |||||||||||| |||||||| Sbjct 2214963 CTTCCCCGTAAGGGTTTTCACGAAAATCTGCAT 2214995 >seq59 Length=2579055 Score = 114 bits (126), Expect = 9e-21 Identities = 153/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 38105 CAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTC 38164 |||||| | |||||||||| |||||||||||| ||||| ||||||||| ||| | || Sbjct 1130466 CAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTGCGTCCATC 1130525 Query 38165 GTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTC 38224 || | ||| || || ||||| || || | || ||||| | || | ||||| || || Sbjct 1130526 TTCCAGTTGCTTGCCAGCAAAGATCAGTCTCTGCTGATCAGGAGGAATTCCTTCCTTATC 1130585 Query 38225 CATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGT 38284 | ||| || ||| ||||| | | ||||| | |||||| | | || || || Sbjct 1130586 CTGAATCTTGGCCTTTACATTTTCTATTGTATCCGAGCGTTCAACCGCGAGAGTGATGGT 1130645 Query 38285 TTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 || ||||| | |||||||||||| |||||||| Sbjct 1130646 CTTCCCCGTAAGGGTTTTCACGAAAATCTGCAT 1130678 >seq395 Length=2662522 Score = 111 bits (122), Expect = 1e-19 Identities = 154/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 38105 CAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTC 38164 |||||| | |||||||||| |||||||||||| ||||| ||||||||| ||| | || Sbjct 955178 CAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTGCGTCCATC 955237 Query 38165 GTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTC 38224 || | ||| || || | || || || | || ||||| | || | |||||||| | Sbjct 955238 TTCCAGTTGCTTGCCAGGCAAGATCAGTCTCTGCTGATCAGGAGGAATTCCTTCTTTATT 955297 Query 38225 CATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGT 38284 ||| || ||| ||||| | | ||||| | |||||| || | ||||| || Sbjct 955298 ATGAATCTTGGCCTTTACATTTTCTATTGTATCCGAAGGTTCAACCTCGAGAGTAATGGT 955357 Query 38285 TTTACCCGTCAAGGTTTTCACGAATATCTGCATGTT 38320 || ||||| | |||||||||||| |||||||| || Sbjct 955358 CTTCCCCGTAAGGGTTTTCACGAAAATCTGCATCTT 955393 >seq530 Length=2118653 Score = 109 bits (120), Expect = 4e-19 Identities = 152/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 38105 CAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTC 38164 |||||| | |||||||||| |||||||||||| ||||| ||||||||| ||| | || Sbjct 63800 CAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTGCGTCCATC 63859 Query 38165 GTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTC 38224 || | ||| || || ||||| || || | || ||||| | | | ||||| || || Sbjct 63860 TTCCAGTTGCTTGCCAGCAAAGATCAGTCTCTGCTGATCAGGAGAAATTCCTTCCTTATC 63919 Query 38225 CATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGT 38284 | ||| || ||| ||||| | | ||||| |||||| || | || || || Sbjct 63920 CTGAATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGTTCAACCTCGAGAGTGATGGT 63979 Query 38285 TTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 || ||||| | |||||||||||| |||||||| Sbjct 63980 CTTCCCCGTAAGGGTTTTCACGAAAATCTGCAT 64012 >seq476 Length=3007960 Score = 105 bits (116), Expect = 4e-18 Identities = 153/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 38105 CAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTC 38164 |||||| | |||||||||| |||||||||||| ||||| | |||||| |||||| || Sbjct 1868602 CAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGGCGGACAAAGTACGTTCATC 1868661 Query 38165 GTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTC 38224 | | ||| || |||||||| || || | |||||||| || | |||| || || Sbjct 1868662 TCCCAGTTGCTTGCCGGCAAAGATCAGTCCCTGTTGATCATGAGGAATTTCTTCCTTATC 1868721 Query 38225 CATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGT 38284 | ||| || ||| ||||| | | ||| | |||||| || | || ||||| Sbjct 1868722 CTGAATCTTGACCTTTACATTTTCTATTGTAGCCGAGGGTTCAACCTCAAGAGTGATAGT 1868781 Query 38285 TTTACCCGTCAAGGTTTTCACGAATATCTGCATGTT 38320 || || || | |||||||||||| |||||||| || Sbjct 1868782 CTTCCCAGTAAGGGTTTTCACGAAAATCTGCATCTT 1868817 >seq29 Length=5782310 Score = 102 bits (112), Expect = 5e-17 Identities = 152/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 38105 CAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTC 38164 |||||| | |||||||||| ||||||||||| ||||| |||||||| || | || Sbjct 156623 CAACACAAGATGAAGAGTGGATTCCTTTTGAATGTTGTAGTCAGACAATGTGTGTCCATC 156564 Query 38165 GTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTC 38224 || ||||| || || ||||| || || | || ||||| | || | ||||| || | Sbjct 156563 TTCCAATTGCTTGCCAGCAAAGATCAGTCTCTGCTGATCAGGAGGAATTCCTTCCTTATT 156504 Query 38225 CATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGT 38284 | ||| || ||| ||||| | | ||||| ||||||| || | || || || Sbjct 156503 CTGAATCTTGGCCTTTACATTTTCTATTGTATCCGAGGTTTCAACCTCGAGAGTGATGGT 156444 Query 38285 TTTACCCGTCAAGGTTTTCACGAATATCTGCATGTT 38320 || || || | |||||||||||| |||||||| || Sbjct 156443 CTTCCCTGTAAGGGTTTTCACGAAAATCTGCATCTT 156408 >seq134 Length=5086271 Score = 91.5 bits (100), Expect = 1e-13 Identities = 77/95 (81%), Gaps = 5/95 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 || ||| ||||||||||||| ||||| || |||||||| ||||| || ||||| || Sbjct 1337435 AAACCCATTCCCTTGGCTGTTGTTTCACTGGATAGTAGGTAGGGATGGTGGGAATCTTGT 1337494 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 | |||| ||||| | ||||||||||||||||||| Sbjct 1337495 TCATCCATTCATACATGTCACTAATTAGATGACGA 1337529 >seq75 Length=4930459 Score = 91.5 bits (100), Expect = 1e-13 Identities = 149/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 38106 AACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTCG 38165 ||||| | |||||||||| |||||||||||| ||||| ||||||||| ||| | || Sbjct 2283666 AACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTGCGTCCATCT 2283725 Query 38166 TCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCC 38225 | | ||| || || ||||| || | | || |||| | || | ||||| || ||| Sbjct 2283726 CCCAGTTGCTTGCCAGCAAAGATCAACCTCTGCTGATGAGGAGGAATTCCTTCCTTATCC 2283785 Query 38226 ATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGTT 38285 ||| || ||| ||||| | | ||||| |||| | | | || || || Sbjct 2283786 TGAATCTTGGCCTTTACATTTTCTAGTGTATCCGAGGGTTCAGCCTTGAGAGTGATGGTC 2283845 Query 38286 TTACCCGTCAAGGTTTTCACGAATATCTGCATGTT 38320 || ||||| | |||||||||||| |||||||| || Sbjct 2283846 TTCCCCGTAAGGGTTTTCACGAAAATCTGCATCTT 2283880 >seq174 Length=4297676 Score = 87.8 bits (96), Expect = 1e-12 Identities = 149/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 38105 CAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTC 38164 |||||| | |||||||||| |||||||||||| |||| ||| ||||| || ||| Sbjct 3533510 CAACACAAGATGAAGAGTGGACTCCTTTTGAATGCTGTAGTCACACAAAGTTTGTCTGTC 3533451 Query 38165 GTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTC 38224 || | ||| || || || || || || | || ||||| | || | ||||| || || Sbjct 3533450 TTCCAGTTGCTTGCCAGCGAAGATCAGTCTCTGCTGATCAGGAGGAATTCCTTCCTTATC 3533391 Query 38225 CATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGT 38284 | || || ||| ||||| | || |||||| ||||| || | || || || Sbjct 3533390 CTGGATCTTGGCCTTTACATTTTCTACTGTATCTGAGGATTCAATCTCGAGAGTGATGGT 3533331 Query 38285 TTTACCCGTCAAGGTTTTCACGAATATCTGCATGTT 38320 || ||| | | ||||||||| || |||||||| || Sbjct 3533330 CTTCCCCATAAGGGTTTTCACAAAAATCTGCATCTT 3533295 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334931308116083