Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Odobenus_20rosmarus_20divergens_20[refseq_20GCF_5F000321225.1_202013 -01-16] 3,893 sequences; 2,400,150,193 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq47 111 1e-19 seq1198 98.7 9e-16 >seq47 Length=4803410 Score = 111 bits (122), Expect = 1e-19 Identities = 148/206 (72%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 24996 ACAATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCG 25055 |||||||| || ||||| ||||| ||||||||||| ||||||| | || |||||| | Sbjct 4290094 ACAATGCAGATCTTTGTGAAGACCTTGACCGGTAAGACCATCACCCTGGAGGTGGAGCCC 4290035 Query 25056 TCTGACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115 |||||| |||||| | ||| || ||| |||||||| || || || |||||| Sbjct 4290034 AGTGACACCATCGAGAATGTCAAGGCGAAGATCCAGGACAAAGAGGGCATCCCCCCTGAC 4289975 Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175 || ||| || | || |||||||| || || | || || | ||||| || || ||| Sbjct 4289974 CAGCAGAGGTTGATCTTTGCCGGGAAGCAGCTGGAGGACGGGCGCACCCTGTCTGACTAC 4289915 Query 25176 AATATTCAAAAAGAATCCACGCTACA 25201 || || || || || ||||| || || Sbjct 4289914 AACATCCAGAAGGAGTCCACTCTGCA 4289889 >seq1198 Length=804178 Score = 98.7 bits (108), Expect = 9e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || ||||| | ||||| || ||||||| | || |||||| | | Sbjct 573713 ATGCAGATCTTCGTGAAGACCCTAACCGGCAAGACCATCACCCTGGAGGTGGAGCCCAGT 573772 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| | || ||||| || ||| || ||||| || || || |||||||| Sbjct 573773 GACACCACTGAAAACGTGAAGGCGAAGATCCAAGATAAAGAGGGCATCCCCCCTGACCAG 573832 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||| || |||| ||||| ||||| || | ||||||| |||||| | ||||||||| Sbjct 573833 CAGAGGCTTATCTTTGCTGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCTGATTACAAT 573892 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 || || ||||| || || || || | || || | || ||||| || Sbjct 573893 ATCCAGAAAGAGTCAACTCTCCACCTGGTTCTCCGTCTGAGAGGTGG 573939 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433307440346795