Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Odobenus_20rosmarus_20divergens_20[refseq_20GCF_5F000321225.1_202013 -01-16] 3,893 sequences; 2,400,150,193 total letters Query= NC_008725.1 Length=111953 Score E Sequences producing significant alignments: (Bits) Value seq530 82.4 5e-11 seq59 82.4 5e-11 seq29 82.4 5e-11 >seq530 Length=2118653 Score = 82.4 bits (90), Expect = 5e-11 Identities = 75/95 (79%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 21951 CAACAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTAC 22010 || |||||||| |||||||||||||| ||||| |||||| | ||| || | || ||| Sbjct 63895 CAGCAGAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGCACTTTGTCTGACTAC 63836 Query 22011 AATATTCAGAAGGAATCTACTCTTCATATGGTATT 22045 || ||||| ||||| || ||||||||| | || || Sbjct 63835 AACATTCAAAAGGAGTCCACTCTTCATCTTGTGTT 63801 >seq59 Length=2579055 Score = 82.4 bits (90), Expect = 5e-11 Identities = 75/95 (79%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 21951 CAACAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTAC 22010 || |||||||| |||||||||||||| ||||| |||||| | ||| || | || ||| Sbjct 1130561 CAGCAGAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGCACTTTGTCTGACTAC 1130502 Query 22011 AATATTCAGAAGGAATCTACTCTTCATATGGTATT 22045 || ||||| ||||| || ||||||||| | || || Sbjct 1130501 AACATTCAAAAGGAGTCCACTCTTCATCTTGTGTT 1130467 >seq29 Length=5782310 Score = 82.4 bits (90), Expect = 5e-11 Identities = 75/95 (79%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 21951 CAACAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTAC 22010 || |||||||| |||||||||||||| ||| | |||||| | | || || | || ||| Sbjct 156528 CAGCAGAGACTGATCTTTGCTGGCAAGCAATTGGAAGATGGACACACATTGTCTGACTAC 156587 Query 22011 AATATTCAGAAGGAATCTACTCTTCATATGGTATT 22045 || ||||| |||||||| ||||||||| | || || Sbjct 156588 AACATTCAAAAGGAATCCACTCTTCATCTTGTGTT 156622 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 358107808433122