Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Odobenus_20rosmarus_20divergens_20[refseq_20GCF_5F000321225.1_202013 -01-16] 3,893 sequences; 2,400,150,193 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq530 109 5e-19 seq33 109 5e-19 seq395 105 6e-18 seq174 105 6e-18 seq59 102 7e-17 seq949 98.7 8e-16 seq476 96.9 3e-15 seq29 93.3 4e-14 seq1114 91.5 1e-13 seq340 89.7 4e-13 seq75 87.8 2e-12 seq34 84.2 2e-11 seq786 82.4 6e-11 >seq530 Length=2118653 Score = 109 bits (120), Expect = 5e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 114155 ACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCT 114214 ||| ||||| |||||||| || | ||| | || || || |||||||||||||| || Sbjct 63785 ACCTCCACGAAGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGA 63844 Query 114215 CATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGG 114274 || ||| || |||||| ||||| || ||||| |||| || | ||| || || |||| Sbjct 63845 CAAAGTGCGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTCTGCTGATCAGGAGA 63904 Query 114275 AATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGAC 114334 ||| ||||| || || |||||| |||| | ||| | || || | || ||| || Sbjct 63905 AATTCCTTCCTTATCCTGAATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGTTCAAC 63964 Query 114335 GTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || | || | || || || || || ||||| || ||||||||||| Sbjct 63965 CTCGAGAGTGATGGTCTTCCCCGTAAGGGTTTTCACGAAAATCTGCAT 64012 >seq33 Length=6086033 Score = 109 bits (120), Expect = 5e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 114155 ACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCT 114214 ||| ||||| |||||||| || | ||| | || || || |||||||||||||| || Sbjct 2214768 ACCACCACGAAGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGA 2214827 Query 114215 CATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGG 114274 || ||| || |||||| ||||| || ||||| | || || | ||| || || ||||| Sbjct 2214828 CAAAGTGCGTCCATCTTCCAGTTGCTTGCCAGCAAATATCAGTCTCTGCTGATCAGGAGG 2214887 Query 114275 AATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGAC 114334 ||| ||||| || || ||||||| |||| | ||| | || | | || ||| || Sbjct 2214888 AATTCCTTCCTTATCCTGAATCTTTGCCTTTACATTTTCCATTGTACCCGAGGGTTCAAC 2214947 Query 114335 GTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || | || | || || || || || ||||| || ||||||||||| Sbjct 2214948 CTCGAGAGTGATGGTCTTCCCCGTAAGGGTTTTCACGAAAATCTGCAT 2214995 >seq395 Length=2662522 Score = 105 bits (116), Expect = 6e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 114155 ACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCT 114214 ||| ||||| |||||||| || | ||| | || || || |||||||||||||| || Sbjct 955163 ACCACCACGAAGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGA 955222 Query 114215 CATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGG 114274 || ||| || |||||| ||||| || |||| |||| || | ||| || || ||||| Sbjct 955223 CAAAGTGCGTCCATCTTCCAGTTGCTTGCCAGGCAAGATCAGTCTCTGCTGATCAGGAGG 955282 Query 114275 AATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGAC 114334 ||| |||||||| | |||||| |||| | ||| | || || | | ||| || Sbjct 955283 AATTCCTTCTTTATTATGAATCTTGGCCTTTACATTTTCTATTGTATCCGAAGGTTCAAC 955342 Query 114335 GTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || | || | || || || || || ||||| || ||||||||||| Sbjct 955343 CTCGAGAGTAATGGTCTTCCCCGTAAGGGTTTTCACGAAAATCTGCAT 955390 >seq174 Length=4297676 Score = 105 bits (116), Expect = 6e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 114155 ACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCT 114214 ||| |||| |||||||| || | ||| | || || || ||||||||| |||| || | Sbjct 3533525 ACCACCACAAAGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGCTGTAGTCACA 3533466 Query 114215 CATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGG 114274 || ||| | ||||| ||||| || |||||| |||| || | ||| || || ||||| Sbjct 3533465 CAAAGTTTGTCTGTCTTCCAGTTGCTTGCCAGCGAAGATCAGTCTCTGCTGATCAGGAGG 3533406 Query 114275 AATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGAC 114334 ||| ||||| || || ||||| |||| | ||| || || || | |||||| | Sbjct 3533405 AATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTACTGTATCTGAGGATTCAAT 3533346 Query 114335 GTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || | || | || || || | || ||||| |||||||||||||| Sbjct 3533345 CTCGAGAGTGATGGTCTTCCCCATAAGGGTTTTCACAAAAATCTGCAT 3533298 >seq59 Length=2579055 Score = 102 bits (112), Expect = 7e-17 Identities = 157/224 (70%), Gaps = 0/224 (0%) Strand=Plus/Plus Query 114159 CCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATA 114218 ||||| |||||||| || | ||| | || || || |||||||||||||| || || | Sbjct 1130455 CCACGAAGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAA 1130514 Query 114219 GTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATG 114278 || || |||||| ||||| || ||||| |||| || | ||| || || |||||||| Sbjct 1130515 GTGCGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTCTGCTGATCAGGAGGAATT 1130574 Query 114279 CCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCC 114338 ||||| || || |||||| |||| | ||| | || || | | ||| || | Sbjct 1130575 CCTTCCTTATCCTGAATCTTGGCCTTTACATTTTCTATTGTATCCGAGCGTTCAACCGCG 1130634 Query 114339 ACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 | || | || || || || || ||||| || ||||||||||| Sbjct 1130635 AGAGTGATGGTCTTCCCCGTAAGGGTTTTCACGAAAATCTGCAT 1130678 >seq949 Length=596474 Score = 98.7 bits (108), Expect = 8e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 || || ||||| || ||||||||||| | ||| || |||||| || || || ||| Sbjct 262184 GTTGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCA 262243 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 || |||| || | ||| ||||| || || ||||| ||||| || ||||| || Sbjct 262244 GCAAAGATAAGCCTCTGCTGGTCAGGGGGGATGCCCTCTTTATCTTGGATCTTGGCCTTC 262303 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | ||| | |||||| ||| || || |||| ||| | || ||||||||||| || Sbjct 262304 ACATTTTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTCAGGGTC 262363 Query 114366 TTTACAAAAATCTGCAT 114382 || ||||| |||||||| Sbjct 262364 TTCACAAAGATCTGCAT 262380 >seq476 Length=3007960 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 114155 ACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCT 114214 ||| |||| |||||||| || | ||| | || || || |||||||||||||| || Sbjct 1868587 ACCACCACCAAGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGGCGGA 1868646 Query 114215 CATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGG 114274 || |||||| |||| | ||||| || || || |||| || | |||||| || |||| Sbjct 1868647 CAAAGTACGTTCATCTCCCAGTTGCTTGCCGGCAAAGATCAGTCCCTGTTGATCATGAGG 1868706 Query 114275 AATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGAC 114334 ||| |||| || || |||||| |||| | ||| | || | | || ||| || Sbjct 1868707 AATTTCTTCCTTATCCTGAATCTTGACCTTTACATTTTCTATTGTAGCCGAGGGTTCAAC 1868766 Query 114335 GTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || | || | || || || || || ||||| || ||||||||||| Sbjct 1868767 CTCAAGAGTGATAGTCTTCCCAGTAAGGGTTTTCACGAAAATCTGCAT 1868814 >seq29 Length=5782310 Score = 93.3 bits (102), Expect = 4e-14 Identities = 155/224 (69%), Gaps = 0/224 (0%) Strand=Plus/Minus Query 114159 CCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATA 114218 ||| | |||||||| || | ||| | || ||||| |||||||||||||| || || Sbjct 156634 CCATGAAGTCTCAACACAAGATGAAGAGTGGATTCCTTTTGAATGTTGTAGTCAGACAAT 156575 Query 114219 GTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATG 114278 || | |||||| | ||| || ||||| |||| || | ||| || || |||||||| Sbjct 156574 GTGTGTCCATCTTCCAATTGCTTGCCAGCAAAGATCAGTCTCTGCTGATCAGGAGGAATT 156515 Query 114279 CCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCC 114338 ||||| || | |||||| |||| | ||| | || || | || ||| || || Sbjct 156514 CCTTCCTTATTCTGAATCTTGGCCTTTACATTTTCTATTGTATCCGAGGTTTCAACCTCG 156455 Query 114339 ACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 | || | || || || || || ||||| || ||||||||||| Sbjct 156454 AGAGTGATGGTCTTCCCTGTAAGGGTTTTCACGAAAATCTGCAT 156411 >seq1114 Length=1661397 Score = 91.5 bits (100), Expect = 1e-13 Identities = 139/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 || || ||||| || ||||||||||| | ||| || |||||| || || || ||| Sbjct 1502932 GTTGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCA 1502991 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 || |||| || | ||| ||||| || || ||||| ||||| || ||||| || Sbjct 1502992 GCAAAGATAAGTCTCTGCTGGTCAGGGGGGATGCCCTCTTTATCTTGGATCTTCGCCTTC 1503051 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | |||| ||| || ||| || || |||| ||| | || ||||||||||| || Sbjct 1503052 ACGTTTTCAGTGGTATCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTCAGGGTC 1503111 Query 114366 TTTACAAAAATCTGCATG 114383 || || || ||||||||| Sbjct 1503112 TTCACGAAGATCTGCATG 1503129 >seq340 Length=3380363 Score = 89.7 bits (98), Expect = 4e-13 Identities = 136/191 (71%), Gaps = 2/191 (1%) Strand=Plus/Minus Query 114193 CTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGA 114252 |||| || ||||||||||| | |||| | |||||| || || || || || ||| Sbjct 3005117 CTTTCTGGATGTTGTAATCAGAAA-AGTAAGGCCATCTTCCAGCTGCTTGCCTGCAAAGA 3005059 Query 114253 TGAGACGCTGTTGGTCCG-GAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGT 114311 |||| | ||| ||||| | | ||| |||||||||| || ||||| || | | Sbjct 3005058 TGAGCCTCTGCTGGTCAGAGGGGATTGCCTTCTTTATCTTGGATCTTAGCCTTCACATTC 3004999 Query 114312 TCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACA 114371 | | ||||| ||||||| || |||| || | || |||||||||||||| || ||| Sbjct 3004998 TTGATGGTGTTACTGGATTCCACCTCCAGAGTGATAGTCTTGCCGGTCAGAGTCTTCACA 3004939 Query 114372 AAAATCTGCAT 114382 ||||||||||| Sbjct 3004938 AAAATCTGCAT 3004928 >seq75 Length=4930459 Score = 87.8 bits (96), Expect = 2e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 114155 ACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCT 114214 ||| ||||| ||||| || || | ||| | || || || |||||||||||||| || Sbjct 2283650 ACCACCACGAAGTCTTAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGA 2283709 Query 114215 CATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGG 114274 || ||| || |||| | ||||| || ||||| |||| | | ||| || | ||||| Sbjct 2283710 CAAAGTGCGTCCATCTCCCAGTTGCTTGCCAGCAAAGATCAACCTCTGCTGATGAGGAGG 2283769 Query 114275 AATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGAC 114334 ||| ||||| || || |||||| |||| | ||| | || || | || ||| | Sbjct 2283770 AATTCCTTCCTTATCCTGAATCTTGGCCTTTACATTTTCTAGTGTATCCGAGGGTTCAGC 2283829 Query 114335 GTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 | | || | || || || || || ||||| || ||||||||||| Sbjct 2283830 CTTGAGAGTGATGGTCTTCCCCGTAAGGGTTTTCACGAAAATCTGCAT 2283877 >seq34 Length=5890018 Score = 84.2 bits (92), Expect = 2e-11 Identities = 96/129 (74%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 114155 ACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCT 114214 ||| ||| | |||||||| || | ||| | ||||| || |||||||||||||| || Sbjct 5577969 ACCACCAGGAAGTCTCAACACAAGATGAAGAGTAGACTCCTTTTGAATGTTGTAGTCAGA 5578028 Query 114215 CATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGG 114274 || |||| | | |||| ||||| || |||| | |||| || | ||| || || ||||| Sbjct 5578029 CAAAGTATGTCCACCTTCCAGTTGCTTGCCAGTGAAGATCAGTCTCTGCTGATCGGGAGG 5578088 Query 114275 AATGCCTTC 114283 ||| ||||| Sbjct 5578089 AATTCCTTC 5578097 >seq786 Length=1074229 Score = 82.4 bits (90), Expect = 6e-11 Identities = 104/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 114155 ACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCT 114214 ||| ||||| |||||||| || | ||| | || || || |||||||||||||| || Sbjct 712512 ACCACCACGAAGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGA 712571 Query 114215 CATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGG 114274 || |||| | |||||| ||||| || ||||| |||| | ||| || || ||||| Sbjct 712572 CAAAGTAGGTCCATCTTCCAGTTGCTTGCCAGCAAAGATTGATCTCTGCTGATCAGGAGG 712631 Query 114275 AATGCCTTCTTTGTCGGCAATCT 114297 ||| |||| || ||| ||||| Sbjct 712632 AATTCCTTACTTATCGTGAATCT 712654 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420114466329516