Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Odobenus_20rosmarus_20divergens_20[refseq_20GCF_5F000321225.1_202013 -01-16] 3,893 sequences; 2,400,150,193 total letters Query= NC_009503.1 Length=124121 Score E Sequences producing significant alignments: (Bits) Value seq530 84.2 2e-11 seq33 84.2 2e-11 seq29 84.2 2e-11 >seq530 Length=2118653 Score = 84.2 bits (92), Expect = 2e-11 Identities = 87/114 (76%), Gaps = 0/114 (0%) Strand=Plus/Plus Query 33900 ACCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGC 33959 |||||| | || | || ||| |||||||| ||| |||||| ||||||||||| || | Sbjct 63785 ACCTCCACGAAGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGA 63844 Query 33960 CAATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATC 34013 ||| || | || |||| ||||||||| ||||| ||||| | ||||||||| Sbjct 63845 CAAAGTGCGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTCTGCTGATC 63898 >seq33 Length=6086033 Score = 84.2 bits (92), Expect = 2e-11 Identities = 78/99 (79%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 33915 CAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCCAATTGTCGCTCGTC 33974 || ||| |||||||| ||| |||||| ||||||||||| || | ||| || | || Sbjct 2214783 CAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTGCGTCCATC 2214842 Query 33975 GTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATC 34013 |||| ||||||||| ||||||||||| | ||||||||| Sbjct 2214843 TTCCAGTTGCTTGCCAGCAAATATCAGTCTCTGCTGATC 2214881 >seq29 Length=5782310 Score = 84.2 bits (92), Expect = 2e-11 Identities = 80/100 (80%), Gaps = 2/100 (2%) Strand=Plus/Minus Query 33915 CAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCCAAT-TGTCGCTCGT 33973 || ||| |||||||| ||| ||||| ||||||||||| || | |||| ||| | | | Sbjct 156623 CAACACAAGATGAAGAGTGGATTCCTTTTGAATGTTGTAGTCAGACAATGTGTGTC-CAT 156565 Query 33974 CGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATC 34013 | |||||||||||||| ||||| ||||| | ||||||||| Sbjct 156564 CTTCCAATTGCTTGCCAGCAAAGATCAGTCTCTGCTGATC 156525 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397043561002186